Part of scaffold_62 (Scaffold)

For more information consult the page for scaffold_62 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

PCYT1A ENSBTAG00000016979 (Cow)

Gene Details

choline-phosphate cytidylyltransferase A

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000022580, Cow)

Protein Percentage 95.64%
cDNA percentage 96.28%
Ka/Ks Ratio 0.31094 (Ka = 0.024, Ks = 0.0773)

PCYT1A  (Minke Whale)

Gene Details

phosphate cytidylyltransferase 1, choline, alpha

External Links

Gene match (Identifier: BACU003813, Minke Whale)

Protein Percentage 98.91%
cDNA percentage 99.36%
Ka/Ks Ratio 0.61636 (Ka = 0.0054, Ks = 0.0087)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1104 bp    Location:1476840..1502109   Strand:+
>bmy_02315
ATGGATGCACAGAATTCAGCCAAAGTCAACATGAGGAAGAGGAGGAAAGAGATACCTGGACCCAATGGGGCAGCAGAGGATGATAGAATTCCTTCAAAAGTGCCACGCTGTGCAATTGGCTTACGGCAGCCAGCGCCTTTTTCTGATGAAATTGAAGTAGACTTTAGTAAGCCCTATGTCAGGGTAACCATGGAAGAAGCCAGCAGAGGAACTCCTTGTGAACGGCCTGTGAGAGTTTATGCAGATGGAATATTTGACTTATTTCATTCTGGTCATGCCCGGGCTCTGATGCAAGCAAAGAACCTTTTCCCTAATACATATCTCATTGTGGGAGTTTGCAGTGATGAGCTAACACACAGCTTCAAAGGCTTCACCGTGATGAATGAAACTGAGCGCTATGATGCAGTGCAGCACTGCCGCTATGTGGATGAGGTGGTGAGGAATGCCCCCTGGACCCTGACACCAGAGTTCCTGGCAGAACACCGGATTGATTTTGTAGCCCATGATGACATCCCTTACTCTTCTGCTGGGAGTGATGATGTTTATAAGCACATCAAGGAAGCAGGCATGTTTGCTCCAACACAGAGGACAGAAGGTATCTCCACATCAGACATCATCACCCGAATTGTCCGCGACTATGATGTGTATGCCAGACGGAACCTACAGAGGGGCTACACGGCAAAGGAACTCAATGTCAGCTTTATCAATGAGAAGAAATACCACTTGCAGGAGCGAGTTGACAAAGTAAAGAAGAAAGTGAAAGATGTGGAGGAAAAGTCAAAAGAATTTGTTCAGAAGGTAGAAGAAAAAAGCATTGACCTCATTCAGAAATGGGAGGAGAAATCCCGAGAATTCATTGGAAGTTTCCTGGAAATGTTTGGTCCAGAAGGAGCACTGAAACATATGCTGAAAGAGGGGAAAGGCCGGATGCTGCAGGCCATCAGTCCAAGGCAGAGTCCCAGCAGCAGTCCCACTCGTGAACGCTCCCCCTCTCCCTCTTTCCGGTGGCCCTTCTCTGCCAAGACTTCCCCGCCTTCCTCCCCAGCAAACCTCTCCAGACACAAGTCTGCAGCCTATGATATCAGTGAGGATGAAGAAGACTAA

Related Sequences

bmy_02315T0 Protein

Length: 368 aa      View alignments
>bmy_02315T0
MDAQNSAKVNMRKRRKEIPGPNGAAEDDRIPSKVPRCAIGLRQPAPFSDEIEVDFSKPYVRVTMEEASRGTPCERPVRVYADGIFDLFHSGHARALMQAKNLFPNTYLIVGVCSDELTHSFKGFTVMNETERYDAVQHCRYVDEVVRNAPWTLTPEFLAEHRIDFVAHDDIPYSSAGSDDVYKHIKEAGMFAPTQRTEGISTSDIITRIVRDYDVYARRNLQRGYTAKELNVSFINEKKYHLQERVDKVKKKVKDVEEKSKEFVQKVEEKSIDLIQKWEEKSREFIGSFLEMFGPEGALKHMLKEGKGRMLQAISPRQSPSSSPTRERSPSPSFRWPFSAKTSPPSSPANLSRHKSAAYDISEDEED*