Part of scaffold_62 (Scaffold)

For more information consult the page for scaffold_62 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TFRC ENSTTRG00000012668 (Bottlenosed dolphin)

Gene Details

transferrin receptor (p90, CD71)

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000012025, Bottlenosed dolphin)

Protein Percentage 96.88%
cDNA percentage 98.26%
Ka/Ks Ratio 0.68021 (Ka = 0.015, Ks = 0.022)

TFRC ENSBTAG00000032719 (Cow)

Gene Details

transferrin receptor protein 1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000043726, Cow)

Protein Percentage 88.07%
cDNA percentage 91.42%
Ka/Ks Ratio 0.37403 (Ka = 0.066, Ks = 0.1764)

TFRC  (Minke Whale)

Gene Details

transferrin receptor

External Links

Gene match (Identifier: BACU003816, Minke Whale)

Protein Percentage 98.96%
cDNA percentage 98.91%
Ka/Ks Ratio 0.19242 (Ka = 0.0045, Ks = 0.0234)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 2307 bp    Location:1625997..1651888   Strand:+
>bmy_02318
ATGATGGATCAAGCAAGATCAGCATTCTCTAACTTGTTTGGTGGAGAACCATTGTCATATACCCGGTTTAGTCTGGCTCGGCAAGTAGATGGCGATAACAGTCATGTGGAGATGAAACTAGCTGTAGATGAAGAAGAAAATGTTGACARTAACATGAGGGGTAACCACACCAGTGTCACAAAACCAAAAAGGTTAAATGGATATATCTGCTATGGGACTATTGCTGTAATCGTCTTTTTCTTGATTGGATTTATGATTGGCTACTTGGGCTAYTGTAAACGTGTAGAACCAAAAGCCGATTGTGAGAGACCGGCAGAAACAGGGCCTTCGTGCACAGAGGAGACAGAACCTTTCGAAACAGAAGAGCAGCTCCCCGAAACACGTCGCATATTTTGGGCAGACCTCAAATCAATGTTGTCGGAGAGACTGGATGCCATAGACTTCACCAGTGCCATCAAGATGCTGAATGAAAATTCTTATGTCCCTCGTGAGGCTGGATCTCAAAAAGATGAAAGCCTTGCTTTTTACATTGAAAATCAATTCCGTGAACTTAAACTCAGCAAAGTCTGGCATGATGAACATTATGTTAAGATTCAGGTCAAAGGCAGCAACTCGGTGACCATAGTGAGTAAGAGCGGCGGCAGCAGTATGGCGTACCAGGTGGAGAATCCCGAGGGTTATGTGGCATATAGTAAGGCTACGACAGTTACTGGTAAACTGGTCCATGCTAATTTTGGCACTAAAAAAGACTTTGAGGATTTAAATATGCCTGTGAATGGATCTTTAGTGATTGTTAGAGCAGGGAAAATTACTTTTGCTGAAAAGGTTGCAAATGCTGAAAGTTTAAATGCAATTGGTGTCTTGATATACATGGACCAGACTAAATTTCCCATTGTTAATGCAGATCTTCCAGTTTTTGGACATGCTCATCTGGGAACAGGTGACCCTTACACACCTGGATTCCCTTCTTTCAATCATACTCAGTTTCCACCATCTCAGTCATCAGGATTGCCTAACATACCTGTCCAAACAATTTCCAGAGCTGGTGCAGAAAAGCTATTTCAAAATATGGAAGGAGACTGTCCTTCTATTTGGGGAATAGACTCCTCATGTAAGCTGGTATCCTCACAGAACAAGAATGTGAAGCTCGCCGTGAACAATGTGCTGAAAGAGATAAGAATTTTTAACATCTTTGGAGTTATTAAGGGCTTTGAAGAACCAGATCGCTATGTTATAGTAGGGGCCCAGAGGGATGCCTGGGGTCCTGGAGCTGCAAAGTCCAGTGTAGGAACAAGTCTCCTATTGAAACTTGCCCAGATACTTTCCGATATGGTCTTAAAAGGTCAGTTTAAACCCAGCAGGAGCATTGTCTTTGCCAGCTGGAGTGGTGGAGACTTTGGAGCTATTGGTGCCACTGAATGGCTAGAGGGATACCTTGCCTCCTTGCATTTAAAGGCTTTCACTTACATTAACCTGGATAAAGCTGTTCTTGGTACCAGCAAGTTCAAAGTTTCTTCCAGCCCACTGTTGTATTCGCTTATTGAGAAGACGATGCAAGATGTGAAACATCCAGTTACTGGGCTCTCTCTATATCGGGACAGCAACTGGATCAACAAAGTCGAGAAACTTTCTTTTGATAATGCTGCTTTCCCTTTCCTTGCATATTCTGGAATCCCAGCAGTCTCTTTCTGTTTTTGTGAGGACACAGATTACCCTTATTTGGGTACTTCCATGGATACCTATGAGGTACTGAATCAGAATGTTCCTCAGTTGAACAAAATGGCACGTGCAGCAGCAGAAGTAGCCGGTCTGCTTGTGATTAAACTTACCCATGATGTTGAATTGAACCTGAACTATGAGATGTATAATGACAAAATACTTTGGTTTGTGAGAGAAATGAACCAGTTCAGAGCAGACATAAAGGAGATGGGTCTGAATCTACAGTGGCTGTATTCTGCTCGTGGAGACTTCTTCCGTGCTACGTCTAGACTAACAACAGATTATAAGAATGCTGAGAGAACAAACAGATTTGTCATGAGGGAGATCAATGACCGTATCATGAAAGTGGAATATCACTTCCTGTCACCCTATGTATCTCCAAGAGAGTCTCCTTTCCGACATATCTTCTGGGGCTCTGGCTCTCACACTCTGTCAGCTTTACTAGAGCACTTGAAGCTGCGGCAGAAAAATAACGGTGCTTTTAATCAAACACTGTTGGAAAACCAGTTGGCTCTAGCAACTTGGACTATTCAGGGAGCTGCAAATGCCCTCTCTGGTGACATCTGGGACATTGACAATGAATTTTAA

Related Sequences

bmy_02318T0 Protein

Length: 769 aa      View alignments
>bmy_02318T0
MMDQARSAFSNLFGGEPLSYTRFSLARQVDGDNSHVEMKLAVDEEENVDXNMRGNHTSVTKPKRLNGYICYGTIAVIVFFLIGFMIGYLGYCKRVEPKADCERPAETGPSCTEETEPFETEEQLPETRRIFWADLKSMLSERLDAIDFTSAIKMLNENSYVPREAGSQKDESLAFYIENQFRELKLSKVWHDEHYVKIQVKGSNSVTIVSKSGGSSMAYQVENPEGYVAYSKATTVTGKLVHANFGTKKDFEDLNMPVNGSLVIVRAGKITFAEKVANAESLNAIGVLIYMDQTKFPIVNADLPVFGHAHLGTGDPYTPGFPSFNHTQFPPSQSSGLPNIPVQTISRAGAEKLFQNMEGDCPSIWGIDSSCKLVSSQNKNVKLAVNNVLKEIRIFNIFGVIKGFEEPDRYVIVGAQRDAWGPGAAKSSVGTSLLLKLAQILSDMVLKGQFKPSRSIVFASWSGGDFGAIGATEWLEGYLASLHLKAFTYINLDKAVLGTSKFKVSSSPLLYSLIEKTMQDVKHPVTGLSLYRDSNWINKVEKLSFDNAAFPFLAYSGIPAVSFCFCEDTDYPYLGTSMDTYEVLNQNVPQLNKMARAAAEVAGLLVIKLTHDVELNLNYEMYNDKILWFVREMNQFRADIKEMGLNLQWLYSARGDFFRATSRLTTDYKNAERTNRFVMREINDRIMKVEYHFLSPYVSPRESPFRHIFWGSGSHTLSALLEHLKLRQKNNGAFNQTLLENQLALATWTIQGAANALSGDIWDIDNEF*