Part of scaffold_62 (Scaffold)

For more information consult the page for scaffold_62 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

MUC20 ENSTTRG00000016285 (Bottlenosed dolphin)

Gene Details

mucin 20, cell surface associated

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000015435, Bottlenosed dolphin)

Protein Percentage 79.58%
cDNA percentage 85.93%
Ka/Ks Ratio 1.06479 (Ka = 0.1633, Ks = 0.1534)

MUC20 ENSBTAG00000032819 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000015160, Cow)

Protein Percentage 53.56%
cDNA percentage 73.22%
Ka/Ks Ratio 1.48197 (Ka = 0.4073, Ks = 0.2749)

MUC20  (Minke Whale)

Gene Details

mucin 20, cell surface associated

External Links

Gene match (Identifier: BACU003819, Minke Whale)

Protein Percentage 86.82%
cDNA percentage 91.22%
Ka/Ks Ratio 1.11188 (Ka = 0.0955, Ks = 0.0859)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 891 bp    Location:1866901..1853606   Strand:-
>bmy_02322
ATGGCGCTGCAGGTGGTGCTGAGGAAGGAGAACCCGCCCAAGCCCTGCCAGAAGCAATCTAGACTGGATGCAGAGCATGCCTTGGTTACCTACAGCATCAGCAACATCGAGGTGATCAACTGCAGTGTTATAGAAATAGAAGCAGCTGCCAGCGTCCCTGGGACCTCAGACATAGATCGCAGCCCCACGGGAGGAAAGGCCCTGTCTACCCCTGAGACATCAGCTTTGCCTGACTCCACTGAAGCAAAATCACACCTYGCCAGGACCACAACCTCTGCTGAGACCTTGTCAACAGCCAGCACCACAGAATCAGCCACACCTGACATCACACTCACCATCAATAGCACCACAGAAATGGAAACAACAGCAGCCAAGGCCACGGCCCCCAGTGGAAACTTGGTGACAGTTAGCATGAACCTCTTGGAAGAAAACTCATCCCTCTCTGTTGAGACAACAAGCCACACCGAGGTCTCAGGAGCAGTTACAATCTCCACGGGGACTGCGTCAACAGCAGGCAAGGTGACTTCCCCTGTTGGGTTCTCAGCTACGGTCTACAGCCTCTCTGAAGTAACTACCATCATGAGCTCCACCCCCTCAGAGACTTCTACCACAGACATCACATTCAGTGTGCCCGTTCCCAACAGCAGGAGCCCTCTTCCTTCTGTCCATCTGGCTACGGCCAACAGCAGCCAAGAAACAAACATCACCTTAGCCAAGRCCACAGCCTCARCAAAGACCTTGAAGATAGCCAGCACAGCTGGAGGGAAACCCTCAACAGCCATGCCCACCAGTGCTCAGASAAGTCTGACAGATGTTACTGCAGGTGAGCGGCTTCCCCCATGTGTGATTTTTGGGGATTTGGGGTTTGGAGTCTGCATGTTTAAGGAGTAG

Related Sequences

bmy_02322T0 Protein

Length: 297 aa      View alignments
>bmy_02322T0
MALQVVLRKENPPKPCQKQSRLDAEHALVTYSISNIEVINCSVIEIEAAASVPGTSDIDRSPTGGKALSTPETSALPDSTEAKSHLARTTTSAETLSTASTTESATPDITLTINSTTEMETTAAKATAPSGNLVTVSMNLLEENSSLSVETTSHTEVSGAVTISTGTASTAGKVTSPVGFSATVYSLSEVTTIMSSTPSETSTTDITFSVPVPNSRSPLPSVHLATANSSQETNITLAKXTASXKTLKIASTAGGKPSTAMPTSAQXSLTDVTAGERLPPCVIFGDLGFGVCMFKE*