Part of scaffold_63 (Scaffold)

For more information consult the page for scaffold_63 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CAPNS1 ENSTTRG00000004389 (Bottlenosed dolphin)

Gene Details

calpain, small subunit 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000004132, Bottlenosed dolphin)

Protein Percentage 59.27%
cDNA percentage 60.62%
Ka/Ks Ratio 0.01462 (Ka = 0.2269, Ks = 15.5215)

CAPNS1 ENSBTAG00000014872 (Cow)

Gene Details

Calpain small subunit 1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000019803, Cow)

Protein Percentage 68.55%
cDNA percentage 69.22%
Ka/Ks Ratio 0.08455 (Ka = 0.2098, Ks = 2.4811)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1227 bp    Location:169198..153385   Strand:-
>bmy_02336
ATGTTTCTTGCAAAGACTCTATTGGAAGGAGCAGATCAAGGTCAAGGTCTTGGACAAGCTCTTGGAGACCTTCTTGGAGGAGGCGGTCAGAGAAGAGGAGGAGGAGGAAATATTGGAGGGATAGTTGGAGGACTTGTGAATTTTATCAGTGAGGCTGCAGCTGCTCAGTATACCCCGGAACCACCACCCACTGAGCAGCATTTCACCAACGTGGAGGCCAACGAAAGTGAGGAAGTTAGGCGGTTTCGGCAACAATTTGCACAGCTGGCTGGACCAGACATGGAGGTAGGTGCCACTGACCTAATGAATATTCTCAACAAAGTCCTGTCTAAGCACAAGGATCTGAAGTCCGACGGCTTTAGTCTTGACACCTGCCGGAGCATCGTGTCCATCATGGACAATGACACAACTGGAAAGCTGGGCTTCGAAGAATTTAAGTATTTCTGGAACAACATCAAGAAATGGCAGCGTGTTTATAAGCAATATGACCGGGACCATTCTGGGTCTCTGGGAAGTTCTCAGCTGCGGGGGGCTCTGCAGGCAGCAGGCTTCCAGCTAAAGGAACAACTTTACCAAATGATTGTCCGCCGATATACCGATGAGGATGGAAGTATGGATTTTAACAACTTCATCGGCTGCCTGGTTCGCCTGGATGCCATGTTTCGTGCCTTCAAATCCCTGGATAGAGATGCGGATGGCCTGATTCAGGTGTCTACCCAAGAATGGCTGCAGCTGACCATTTGGTGTTACATCTTCAGTGGAAATCTTGAATCCTCTGTTTCTACCTTCTCCGATGAGAAAGTGAAGAACCATGATGGCAGTATTGACTTCCGAGAGTATGTAATTGGCCTGGCTGTCCTGTGTAACCCTGCCAACACAGAGGAGATCATCCAGGTGGCATTTAAGCTCTTTGATGTTGATGAGGATGGCTTCATAACAGAGGAAGAGTTCGCCACCATTCTGCAGGCTTCCCTTGGAGTGCCTGACCTTGATGTTTCTGGTCTCTTCAAGGAAATAGCCCAGGGGGATTCTGTTTCGTATGAGGAATTTAAAAGTTTTGCCCTAAAGCATCCAGAATATGCTAAGATATTTACAACCTACTTAGACCTCCAGACGTGCCATGTGTTTTCATTACCAAAAGAAGTCCAAGCAACTCCCTCAGTCGTAAGTAATAAAGTCAGCCCTGAAAGTCATGAAGAGAGTACCTCAGACAAAAAGGACGACTGA

Related Sequences

bmy_02336T0 Protein

Length: 409 aa      View alignments
>bmy_02336T0
MFLAKTLLEGADQGQGLGQALGDLLGGGGQRRGGGGNIGGIVGGLVNFISEAAAAQYTPEPPPTEQHFTNVEANESEEVRRFRQQFAQLAGPDMEVGATDLMNILNKVLSKHKDLKSDGFSLDTCRSIVSIMDNDTTGKLGFEEFKYFWNNIKKWQRVYKQYDRDHSGSLGSSQLRGALQAAGFQLKEQLYQMIVRRYTDEDGSMDFNNFIGCLVRLDAMFRAFKSLDRDADGLIQVSTQEWLQLTIWCYIFSGNLESSVSTFSDEKVKNHDGSIDFREYVIGLAVLCNPANTEEIIQVAFKLFDVDEDGFITEEEFATILQASLGVPDLDVSGLFKEIAQGDSVSYEEFKSFALKHPEYAKIFTTYLDLQTCHVFSLPKEVQATPSVVSNKVSPESHEESTSDKKDD*