Part of scaffold_63 (Scaffold)

For more information consult the page for scaffold_63 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

MMP2 ENSTTRG00000001180 (Bottlenosed dolphin)

Gene Details

matrix metallopeptidase 2 (gelatinase A, 72kDa gelatinase, 72kDa type IV collagenase)

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000001107, Bottlenosed dolphin)

Protein Percentage 94.59%
cDNA percentage 94.46%
Ka/Ks Ratio 0.17023 (Ka = 0.0153, Ks = 0.0901)

BT.69347 ENSBTAG00000019267 (Cow)

Gene Details

72 kDa type IV collagenase precursor

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000025657, Cow)

Protein Percentage 96.27%
cDNA percentage 94.19%
Ka/Ks Ratio 0.06435 (Ka = 0.0163, Ks = 0.2527)

MMP2  (Minke Whale)

Gene Details

matrix metallopeptidase 2 (gelatinase A, 72kDa gelatinase, 72kDa type IV collagenase)

External Links

Gene match (Identifier: BACU001858, Minke Whale)

Protein Percentage 99.06%
cDNA percentage 98.67%
Ka/Ks Ratio 0.08689 (Ka = 0.004, Ks = 0.046)

Genome Location

Sequence Coding sequence

Length: 1449 bp    Location:241737..218075   Strand:-
>bmy_02338
ATGACCGAGGCGCGAGTGGCTCGGGGCGCGCTGGCCGGCCCCCTGCGGGCGCTCTGCGTCCTGGGCTGCCTGTTGGGCCGCGCCACCGCCGCGCCGTCGCCCATCATCAAGTTTCCTGGCGATGTCGCCCCCAAAACGGACAAAGAGTTGGCTGTGGACACGCTGAAGAAGATGCAGAAGTTCTTCGGGCTACCCCAGACAGGTGAACTGGACCAGAGCACCATCGAGACCATGCGGAAGCCGCGCTGCGGCAACCCCGACGTGGCCAACTACAACTTCTTCCCCCGCAAGCCCAAGTGGGACAAGAACCAGATCACCTACAGGATTATTGGCTACACCCCTGATCTGGACCCCGAGACAGTGGACGATGCCTTCGCTCGTGCCTTCCGAGTCTGGAGTGATGTGACTCCACTGCGGTTTTCTCGGCTCCATGATGGAGAAGCTGACATCATGATCAACTTTGGCCGCTGGGTGGTCCGCGTGAAGTATGGGAACGCCGACGGGGAGTACTGCAAGTTCCCCTTCCTGTTCAACGGCAAGGAGTACACCAGCTGCACRGACACGGGCCGCAGCGACGGCTTCCTCTGGTGTTCCACCACCTACAACTTCGACAAGGACGGCAAGTAYGGCTTCTGCCCCCATGAAGGGTACAGCCTGTTCCTGGTGGCAGCCCATGAGTTTGGCCATGCAATGGGGCTGGAGCACTCAGAGGATCCCGGAGCCCTAATGGCCCCCATTTACACCTACACCAAGAACTTCCGCCTGTCACATGATGACGTCAAGGGCATTCAAGAGCTCTATGGGGCCTCCCCTGACATTGACACTGGCACCGGCCCCACGCCCACACTGGGCCCCATCACTCCTGAGATCTGCAAACAGGACATCGTCTTTGATGGCATCTCTCAGATCCGTGGGGAGATCTTCTTCTTCAAGGACCGGTTCATTTGGCGAACAGTGACACCACGTGACAAGCCCATGGGGCCCCTGCTGGTGGCCACATTCTGGCCTGAGCTCCCGGAAAAGATCGATGCTGTATACGAGGCCCCACAGGAGGAGAAGGCTGTGTTCTTTGCAGGGAATGAATACTGGGTCTATTCAGCCAGCACCCTGGAGCGAGGGTACCCCAAGCCACTGACCAGCCTGGGGCTTCCCCCTGATGTCCAAAAAGTGGATGCTGCCTTTAACTGGAGCAAGAACAAGAAGACGTACATCTTCGCTGGAGACAAGTTCTGGAGATACAATGAGGTGAAGAAGAAAATGGATCCCGGCTTCCCCAAGCTCATCGCAGATGCCTGGAACGCCATCCCTGATAACCTGGATGCCGTGGTGGACCTGCAGGGCGGGGGTCACAGCTACTTCTTCAAGGGCGCGTATTACCTGAAGTTGGAGAACCAAAGTCTGAAGAGCGTGAAGTTCGGAAGCATCAAATCCGACTGGCTGGGCTGCTGA

Related Sequences

bmy_02338T0 Protein

Length: 483 aa      View alignments
>bmy_02338T0
MTEARVARGALAGPLRALCVLGCLLGRATAAPSPIIKFPGDVAPKTDKELAVDTLKKMQKFFGLPQTGELDQSTIETMRKPRCGNPDVANYNFFPRKPKWDKNQITYRIIGYTPDLDPETVDDAFARAFRVWSDVTPLRFSRLHDGEADIMINFGRWVVRVKYGNADGEYCKFPFLFNGKEYTSCTDTGRSDGFLWCSTTYNFDKDGKYGFCPHEGYSLFLVAAHEFGHAMGLEHSEDPGALMAPIYTYTKNFRLSHDDVKGIQELYGASPDIDTGTGPTPTLGPITPEICKQDIVFDGISQIRGEIFFFKDRFIWRTVTPRDKPMGPLLVATFWPELPEKIDAVYEAPQEEKAVFFAGNEYWVYSASTLERGYPKPLTSLGLPPDVQKVDAAFNWSKNKKTYIFAGDKFWRYNEVKKKMDPGFPKLIADAWNAIPDNLDAVVDLQGGGHSYFFKGAYYLKLENQSLKSVKFGSIKSDWLGC*