Part of scaffold_63 (Scaffold)

For more information consult the page for scaffold_63 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

IRX6 ENSTTRG00000001179 (Bottlenosed dolphin)

Gene Details

iroquois homeobox 6

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000001105, Bottlenosed dolphin)

Protein Percentage 50.0%
cDNA percentage 50.31%
Ka/Ks Ratio 0.28576 (Ka = 0.0336, Ks = 0.1177)

IRX6 ENSBTAG00000016407 (Cow)

Gene Details

iroquois-class homeodomain protein IRX-6

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000021815, Cow)

Protein Percentage 91.42%
cDNA percentage 92.88%
Ka/Ks Ratio 0.26656 (Ka = 0.0439, Ks = 0.1648)

IRX6  (Minke Whale)

Gene Details

iroquois homeobox 6

External Links

Gene match (Identifier: BACU001860, Minke Whale)

Protein Percentage 87.79%
cDNA percentage 89.22%
Ka/Ks Ratio 0.47791 (Ka = 0.0931, Ks = 0.1949)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1431 bp    Location:373158..368982   Strand:-
>bmy_02339
ATGTCCTTCCCGCACTTTGGACACCCTTATGGCAGCGCTTCCCAGTTTCTGGTGTCTGCAAGTTCCAATGCCACTTGCTGCGAATCCGCCCCGCGCTCGGTCCCAGATGTGGCCTCAGGCTCCACCCCGGCGGCCGCGCTCTGCTTCGCACCCTACGACAGTCGGCTGCTGGGCAGTGCGAGGCCCGAGCTGGGCGCGGCCTTGGGCATCTATGGGCATCCCTACTCGGCCGCTGCAGCTGCCCAGAGCTACGCAGGCTACCTGCCCTACAGCCCGGAGCCGCCCACGCTGTAYGGGGCGCTGGAGGCTGCAGGGAACTTTACACCCGGCCTGGCGCAACCAGCAGCCTATTATCCCTATGAGCAGAGCCTGGGGCAGTACCAGTATGACCGGTACGGAGCGGTGGAGTTGGGTGGCACTGGGCGCAGAAAGAATGCCACCCGGGAGACCACTAGCACGCTCAAGGCCTGGCTGAACGAGCACCGCAAGAACCCCTACCCCACCAAGGGCGAGAAGATCATGCTGGCCATCATCACCAAGATGACCCTCACCCAGGTGTCCACCTGGTTCGCCAACGCRCGCCGGCGCCTCAAGAAGGAGAACAAGATGACTTGGGCGCCCAAGAACAAAGGCGGGGAGGAGAGGAAGGAGGAGGGTGGAGCAGAGGAATTGCTGGGCTGCCTAAATGACGTTTCTGCTAGCCAGGAGGCTCGGGGGCTGAGTGACCTGGAAGACCTGGAGGAAGAAGAGGAAGAGGAGGCGGATGAAGAGGAGGCAGTGGCCACAGCTACGGACAGGCTGGCTGAGCTCCATSAAGACACTCAGTCGCTGCCGGCGGCACAATGTGCCGCAGCTCGAGAGGGCCGGCTGGAGCGCAGGGAGTGCAGTCTGGCGGCGCCCCGCTTCTCGTTCACTGAGCCCCCCAGGTCGGGAGAAACCGACTTCCTGCGGGCCGAGCCAGGAGGCCCCACTTTGACCATGCACTACCCCCGCAGCGAGAAACCGCGCATCTGGTCTCTGGCGCACACTGCGGCAGCCAGCGGCGTCGAAGGGGCACCTCCAAACCTGTCCAGGCCACGAAGTCCTGAGTGCCATCTGATTCCCGGACAGCCTCCAGGCCCCGGCGCGCGACCCGCGGTCCCCAGAGACTCCGCGTGCGAAGAGTCTTCCCGAGTAGCCAAAGCCTTTGGAAACCCCTCGTTTGCCCAACAGGGCCTGCCTCTGGACTGTGCGCCGTGCCCGCGGAGGAGGGCGCCGGCAGTGCAGTGCCAGTACCAGTCGGGAGCAGAAGGTAGTGGGCCCCCAACGGCGCTGGGAGTGTCTGTCCAAAAGACACCTTCCCCCGACACACACATCCATCCACCCACCCCCCGGGTGCCCAGCCGCTGCACACTCTCTCTGCCTCTCCAGCATGCCCAGGTTCAGACCTAG

Related Sequences

bmy_02339T0 Protein

Length: 477 aa      View alignments
>bmy_02339T0
MSFPHFGHPYGSASQFLVSASSNATCCESAPRSVPDVASGSTPAAALCFAPYDSRLLGSARPELGAALGIYGHPYSAAAAAQSYAGYLPYSPEPPTLYGALEAAGNFTPGLAQPAAYYPYEQSLGQYQYDRYGAVELGGTGRRKNATRETTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWAPKNKGGEERKEEGGAEELLGCLNDVSASQEARGLSDLEDLEEEEEEEADEEEAVATATDRLAELHZDTQSLPAAQCAAAREGRLERRECSLAAPRFSFTEPPRSGETDFLRAEPGGPTLTMHYPRSEKPRIWSLAHTAAASGVEGAPPNLSRPRSPECHLIPGQPPGPGARPAVPRDSACEESSRVAKAFGNPSFAQQGLPLDCAPCPRRRAPAVQCQYQSGAEGSGPPTALGVSVQKTPSPDTHIHPPTPRVPSRCTLSLPLQHAQVQT*