Sequence detailsbmy_02344 (Coding sequence)

Part of scaffold_63 (SequenceType object (1))

For more information consult the page for scaffold_63 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

RPGRIP1LENSTTRG00000012707 (Bottlenosed dolphin)

Gene Details

RPGRIP1-like

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000012058, Bottlenosed dolphin)

Protein Percentage 93.77%
cDNA percentage 94.89%
Ka/Ks Ratio 0.33583 (Ka = 0.0149, Ks = 0.0444)

RPGRIP1LENSBTAG00000012499 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000016585, Cow)

Protein Percentage 94.36%
cDNA percentage 95.23%
Ka/Ks Ratio 0.21271 (Ka = 0.0267, Ks = 0.1258)

RPGRIP1L (Minke Whale)

Gene Details

RPGRIP1-like

External Links

Gene match (Identifier: BACU001867, Minke Whale)

Protein Percentage 97.93%
cDNA percentage 98.48%
Ka/Ks Ratio 0.3325 (Ka = 0.0098, Ks = 0.0296)

Additional orthologs identified in other species via the OPTIC pipeline.

RPGRIP1L (Human)   Rpgrip1l (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 3156 bp    Location:1731797..1791023   Strand:+
Raw sequence 
>bmy_02344
ATGTTTTTCCCGTCCTCCTCTCGGCCGGCCGCCCCACACGCCGTCGGCGCTATAGCAACGGTAGCTAGCGGCGGGGAGAGAGTGGAGTTAATGTTACAACTTGGAAAGATTTTGTTTGAATTTTCTTTTCTCCACAGATACGCAATGTCTGGTCCAACTGATGAGACTGCAGGAGACCTGCCTGTGAAAGATACAGGTCTAAATCTCTTTGGAATGGGAGGGTTACAAGAAACTTCAACAACACGGACAATGAAGTCTCTCCAGGCAGTGTCACGTATCAGTCGTGAGGAACTGGAAGACAGATTTTTACGTTTGCATGATGAGAACATTTTACTTAAACAGCATGCCCGCAAGCAAGAGGATAAAATTAAAAGAATGGCCACCAAGTTAATACGGCTAGTTAATGACAAGAAAAGATATGAACGGGTTGGTGGCGGCCCCAAGCGGCTGGGAAGAGATGTGGAAATGGAAGAAATGATTGAGCGGCTGCAAGAGAAAGTTCATGAGCTTGAAAGACAAAATGAAGTCCTCAAAAACAGACTAATTTCAACCAAACAGCAACTTCAGATCCAGGGTCACAGGCAAACTCCATACAGTTATGTGCAATCTCGTGTTAACACTGGGCGTAGAAAAGTGAATGAAAATGCAGGCTTACAGGAATGCCCCAGGAAAGGTATTAAATTCCAAGATACAGATGTAGCGGAAACTCTGCAACCCATGCCTACAAAACATGGCAACAGTTTACTCGAAGAAGCCAGAGGAGAAATAAGAAATTTAGAAAATGTTATTCAGTCACAGAGAGGCCAGATAGAAGAGTTAGAGCACTTGGCTGAGATCCTGAAAACTCAGTTGAGGAGAAAAGAAAATGAAATTGAGTTATCTCTTCTTCAGCTTCGAGAACAGCAGGCTACAGATCAAAGGTCAAACATTCGGGACAACGTAGAAATGATTAAGCTTCATAAGCAGCTAGTGGAGAAAAGCAATGCTCTTTCAGTAATGGAAGGAAAATTTATTCAGCTTCAAGAGAAGCAAAAAACTCTCCGGATCAGCCATGAYGCCTTGATGGCAAATGGAGATCAGCTAAACATGCAGCTTAAAGAGCAGCGTTTAAAATGCTGCAGTCTTGAGAAGCAGTTACGTTCCATGACATTTTCTGAAAGAAGAATAGAAGAGCTGCAGGATAGAATTAATGATTTAGAAAAGGAACGGGAACTTTTAAAGGAAAACTATGATAAACTTTATAACAGTGCCTTCAGTGCTGCCCATGAAGAGCAATGGAAGCTAAAGGAACAGCAGCTGAAAGTACAGATTGCTCAACTCGAGACTGCCTTAAAATCCGATTTAGCAGACAAAACTGAAATCCTTGACAGATTAAAAACTGAAAGAGACCAAAATGAGAAAATCATTCAAGAAAATAGAGAACTACAGTTACAGTACCTGGAACAAAAGCAACAACTTGATGAACTTAAAAACCGCATGAAGTTTTACAACCAGGAGAGTGATATTAATGCTGATGAATTGAGTGAAGCTCTCTTGCTTATAAAGGCTCAAAAATCACAAAAAAATGGAGACCTTTCTTTTTTAGAGAAAGTAGACAGTAAAATTAATAAAGATCTAGAACGCTCCATGAAAGAGCTGCAAGCAACTCATGCAGAAACAGTGCAAGAGCTTGAAAAGACAAGAAACATGCTAATTATGCAACATAAAATTAATAAAGATTATCAGATGGAAGTTGAGGCAGTGACCCAGAAGATGGAAAATTTGCAGCAAGATTATGAACTCAGAGTGGAACAGTATGTCCACCTTCTTGATATCAGGGCTGCACGCATCCAGAAACTAGAAGCCCAATTAAAGGATATTGCCTATGGCACCAAGCAGTACAAATTTAAACCAGAAATCATGCCAGATGACTCCGTTGATGAGTTTGATGAAACCATTCACTTAGAACGAGGCGAAAACCTATTTGAAATCCATATCAACAAAGTAACCTTTTCTCCTGAAGTTTTACAGGCATCTGGAGATAAAGAGCCTGTCACCTTCTGTACCTATGCTTTCTATGATTTTGAACTACAGACAACTCCCATAGTGCGGGGCCTTCACCCAGAATATAACTTTACTTCTCAATATCTCGTTCATGTTAATGACTTATTCTTACAATACATTCAGAAAAATACTATTACTCTTGAGGTCCACCAGGCTTACAGCACAGATTATGAAACAATCGCGGCATGTCAGTTGAGATTCCATGAAATTCTAGAAAAAAGCGGTCGAATATTTTGCACAGCAAGTTTGGTTGGAACTAAAGGAGACATCCCCAATTTTGGCACAGTGGAATACTGGTTCCGATTAAGAGTTCCCATGGATCAAGCAATTCGACTTTATCGAGAACGGGCAAAGGCTTTGGGATATATAACATCAAATTTTAAGGGGCCAGAGCAAATGCAATGGTTAAGTCAGCAAGCACCCAAAACTGCTCAGCTCGGTTCTACTGATTCCACAGATGGCAACTTAAATGAACTTCATGTTACAGTAAGATGCTGCAGCCGCCTGCAGTCCCGAGCAAGCCACCTTCAGCCACACCCATATGTTGTGTACAAGTTTTCTGACTTTGCAGACCATGACACAGCCATCATTCCCAGTAGCAGTGATCCACAGTTTGATGATCATATGTGTTTCCCAGTGCCAATGAATATGGATTTGGATCGATACCTTAAGTCAGAGTCTCTGAGTTTTTATGTGTTTGATGATAGTGATACCCAGGAGGATATTTACATAGGAAAAGTCAATGTGCCTCTGATTTCACTGGCACATGACAGGTGTATTTCAGGAATATTTGAGTTAACAGATCATAAAAAGCATCCTGCAGGAAGCATCCATGTTATATTGAAATGGAAATTTGCTTACCTTCCACCAAGTGGATCCATAACAACTGAAGACTTAGGGAATTTCATACACAAAGAAGAGTCTGAAGTTGTTCAAAGACTACCTCCAACATCCTCTGTTAGCACACTAGTAGTGAGTAACAGTGACTTTGAATTTCCTATAAAAGCACCAACACCTAAGCCAAGACGTTTAACACCTAAAGATAAGAAGGTATCTTTTGTGGATATCACACCACATCAGCGTTCTGTAAGTAGTAAACACTCAAAATACTAA

Related Sequences

bmy_02344T0 SequenceType object (3)

Length: 1052 aa      View alignments
>bmy_02344T0
MFFPSSSRPAAPHAVGAIATVASGGERVELMLQLGKILFEFSFLHRYAMSGPTDETAGDLPVKDTGLNLFGMGGLQETSTTRTMKSLQAVSRISREELEDRFLRLHDENILLKQHARKQEDKIKRMATKLIRLVNDKKRYERVGGGPKRLGRDVEMEEMIERLQEKVHELERQNEVLKNRLISTKQQLQIQGHRQTPYSYVQSRVNTGRRKVNENAGLQECPRKGIKFQDTDVAETLQPMPTKHGNSLLEEARGEIRNLENVIQSQRGQIEELEHLAEILKTQLRRKENEIELSLLQLREQQATDQRSNIRDNVEMIKLHKQLVEKSNALSVMEGKFIQLQEKQKTLRISHDALMANGDQLNMQLKEQRLKCCSLEKQLRSMTFSERRIEELQDRINDLEKERELLKENYDKLYNSAFSAAHEEQWKLKEQQLKVQIAQLETALKSDLADKTEILDRLKTERDQNEKIIQENRELQLQYLEQKQQLDELKNRMKFYNQESDINADELSEALLLIKAQKSQKNGDLSFLEKVDSKINKDLERSMKELQATHAETVQELEKTRNMLIMQHKINKDYQMEVEAVTQKMENLQQDYELRVEQYVHLLDIRAARIQKLEAQLKDIAYGTKQYKFKPEIMPDDSVDEFDETIHLERGENLFEIHINKVTFSPEVLQASGDKEPVTFCTYAFYDFELQTTPIVRGLHPEYNFTSQYLVHVNDLFLQYIQKNTITLEVHQAYSTDYETIAACQLRFHEILEKSGRIFCTASLVGTKGDIPNFGTVEYWFRLRVPMDQAIRLYRERAKALGYITSNFKGPEQMQWLSQQAPKTAQLGSTDSTDGNLNELHVTVRCCSRLQSRASHLQPHPYVVYKFSDFADHDTAIIPSSSDPQFDDHMCFPVPMNMDLDRYLKSESLSFYVFDDSDTQEDIYIGKVNVPLISLAHDRCISGIFELTDHKKHPAGSIHVILKWKFAYLPPSGSITTEDLGNFIHKEESEVVQRLPPTSSVSTLVVSNSDFEFPIKAPTPKPRRLTPKDKKVSFVDITPHQRSVSSKHSKY*