Part of scaffold_61 (Scaffold)

For more information consult the page for scaffold_61 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

C1orf116 ENSTTRG00000012116 (Bottlenosed dolphin)

Gene Details

chromosome 1 open reading frame 116

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000011491, Bottlenosed dolphin)

Protein Percentage 89.71%
cDNA percentage 93.79%
Ka/Ks Ratio 0.73381 (Ka = 0.0592, Ks = 0.0807)

SARG ENSBTAG00000018143 (Cow)

Gene Details

Specifically androgen-regulated gene protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000024149, Cow)

Protein Percentage 78.6%
cDNA percentage 84.59%
Ka/Ks Ratio 0.36535 (Ka = 0.1248, Ks = 0.3415)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1794 bp    Location:133430..145872   Strand:+
>bmy_02358
ATGCCCGAGAGAGAGCTGTGGCCAGCAGGGCCTGGCTTGGAACCCGTGACCCACATTGGTAGCTGCGACAGCATGATGAGCACCACCTCCACCCTCTCTGGATCTAGTGACAGCAACTACGACTTCCTGTCCGCTGAAGAGAAGGAGTGTCTGCTCTTCTTAGAGGAAACCATTGGCTCATTGGACACCGAGGCTGACAGTGGACTGTCCACTGACAAGTCTGGGCAAGCCACAGCTCCCCGAGGACATCCGAAAGAGACTGTTCAGCAAGGAACAGAGCCAAAAAGAGTGACTCCATTCAGCTTGTCTCATCTGCCCGAGCCTCAAAGCCTGGGCCTCAGGTCTGGCTCCTACAGCCTCCCCAGAAATATCCACATCGGCAGAGACCAGATCCTCAGAGAAAGCACCACACAGACTAACAGCCACATCCCGGGGGCATCTGAGGGGCTTGTCCCGGGGCCTGAGAAAGAGCAGGTCAGCCAGAGCAGTGAGCCCCACCAGGCACCGACAGGCCCCCGGGACGCGGCCCTTGATCTGGACAGGGCCTTCATCCCCCCACCAGAGGCCTTCCGGGACACCCAGCCAGAGCAGCGTGGGCAACACGGCCTGCCCAGCCAGCCAGGGGAGCTGAGTCACAGGCCCCAGCTCCACACATCACTCTGCCTCCAGCAAAAAAAGGATACCACTTCGGAGGCCATGTCCCAAAAAGCCAGTGAGGAAGGCTCAACCGGGGAACCTGGACAAGCTCGGCCTCCTCCAGCTGTGTCCTCGCAGAATGCAAAAGCTGAAGATGTTCCTGGCCCATCACGGGGGGATCCAAATGCCCGGCCGGCTCCCCTCACAGCCCCTAAGACACGGAAGCTGCCACCAAATATTGTTCTGAAGAGCAGCCGAGGTGGTTTCCACAGTGATCCCCAGAATCGGCTGTCTTGCCACTCGGAGGCTGGCCCTGGAGACTCGGGCCCCGCCTCGTCATCACTGCAGGAGCAGAGGAGAGCACGCAGGGAAGCGCTGGAGAAGCTGGGGCTGCCCCAGGACCAAGACGAGGCCAGCGCCCACTTAAGTAGGCCCTCCATCAGGCTCAGGGAGACTCGCACTCAGGCCCCCTCCCCAGCTCCGGCTCCGGCTCAGCCTGTGGTTCCAGCTCAGGTCTCAGCAGCGACAGGAAAGGCTCCAGCACCTGCACCAATGCGGGGACCTTCTCCAGTGAAAGCTCCGGGTCCGGCTCCAGCTCAGCCGTCTTCTCCAGGCAAGGTTTTGGTTCCCGCCCAGGAACCCACTCCAGGCAAAGTTCCAGCTGCCAAATCCATGCCAATTCCTATCCCTAAGGCCCCACAGGCAAATAGTCCCCTGACTCAGCCAAAGCCAGACTCTGGGCTGACTCTCCAGGAGAGCAACATCCCTGGCCTGAGACAGATGAACTTCAAGTCCAACACGCTGGAGCGTTCAGGCGTGGGGCTGAGCAGCTACCTCTCAGCGGAGAAAGATCGCAGCCCCAAAACCAGCACCTCTCTGGGAAAAAGCTCCTTCTTGGACAAGATCTCACCCAACGTCTTGCGTAACTCCCGGCCGCGCCCGGCCTCCTTGGGCACCAGGAAGGACTTCGAGGGTATCCAGGTGGGCAAGTTGGCCGACCTGGAGCAGGAGCAGGGCTCCAAGCACCTGTCTTACCAAGGACAGAGCCGTGACAAGCTGCCTCGACCCCCCTGTGTCAGTGTCAAGATCTCCCCAAAAGGCGTGTCTGCTGAACACAGAAGGGAGGCTCTCAAGAAGCTGGGCCTGTTGAAGAAGTAG

Related Sequences

bmy_02358T0 Protein

Length: 598 aa      View alignments
>bmy_02358T0
MPERELWPAGPGLEPVTHIGSCDSMMSTTSTLSGSSDSNYDFLSAEEKECLLFLEETIGSLDTEADSGLSTDKSGQATAPRGHPKETVQQGTEPKRVTPFSLSHLPEPQSLGLRSGSYSLPRNIHIGRDQILRESTTQTNSHIPGASEGLVPGPEKEQVSQSSEPHQAPTGPRDAALDLDRAFIPPPEAFRDTQPEQRGQHGLPSQPGELSHRPQLHTSLCLQQKKDTTSEAMSQKASEEGSTGEPGQARPPPAVSSQNAKAEDVPGPSRGDPNARPAPLTAPKTRKLPPNIVLKSSRGGFHSDPQNRLSCHSEAGPGDSGPASSSLQEQRRARREALEKLGLPQDQDEASAHLSRPSIRLRETRTQAPSPAPAPAQPVVPAQVSAATGKAPAPAPMRGPSPVKAPGPAPAQPSSPGKVLVPAQEPTPGKVPAAKSMPIPIPKAPQANSPLTQPKPDSGLTLQESNIPGLRQMNFKSNTLERSGVGLSSYLSAEKDRSPKTSTSLGKSSFLDKISPNVLRNSRPRPASLGTRKDFEGIQVGKLADLEQEQGSKHLSYQGQSRDKLPRPPCVSVKISPKGVSAEHRREALKKLGLLKK*