Sequence detailsbmy_02393 (Coding sequence)

Part of scaffold_61 (SequenceType object (1))

For more information consult the page for scaffold_61 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

RBBP5ENSTTRG00000006586 (Bottlenosed dolphin)

Gene Details

retinoblastoma binding protein 5

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000006232, Bottlenosed dolphin)

Protein Percentage 98.61%
cDNA percentage 98.34%
Ka/Ks Ratio 0.20434 (Ka = 0.0085, Ks = 0.0418)

RBBP5ENSBTAG00000015946 (Cow)

Gene Details

retinoblastoma-binding protein 5

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000021204, Cow)

Protein Percentage 99.81%
cDNA percentage 97.21%
Ka/Ks Ratio 0.00967 (Ka = 0.0009, Ks = 0.0982)

RBBP5 (Minke Whale)

Gene Details

retinoblastoma binding protein 5

External Links

Gene match (Identifier: BACU019196, Minke Whale)

Protein Percentage 99.22%
cDNA percentage 99.16%
Ka/Ks Ratio 0.22558 (Ka = 0.0048, Ks = 0.0212)

Additional orthologs identified in other species via the OPTIC pipeline.

RBBP5 (Human)   Rbbp5 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 1542 bp    Location:1796711..1820109   Strand:+
Raw sequence 
>bmy_02393
ATGGCCCTGACTTGCACCTTTAACAGGTGGGGCACACTGCTTGCAGTTGGCTGTAATGATGGCCGAATTGTCATCTGGGATTTCTTGACAAGAGGCATTGCTAAAATAATTAGTGCGCACATTCATCCAGTCTGTTCCTTATGCTGGAGTCGAGATGGTCATAAGCTCGTGAGTGCTTCCACTGATAACATAGTGTCACAGTGGGATGTCCTTTCAGGCGACTGCGACCAGAGGTTTCGATTCCCTTCACCCATCTTAAAAGTCCAGTATCATCCGCGAGATCAGAACAAGGTTCTCGTGTGTCCCATGAAATCTGCTCCTGTCATGTTGACCCTTTCAGATTCCAAACATGTTGTTCTGCCCGTAGACGATGACTCCGATTTGAACGTGGTTGCATCTTTTGATAGGCGAGGAGAATATATCTATACAGGAAATGCAAAAGGCAAGATTTTGGTCCTAAAAACAGATTCTCAGGATCTTGTTGCTTCCTTCAGAGTAACAACTGGAACAAGCAATACCACAGCCATTAAGTCAATAGAGTTTGCCCGGAAGGGCAGTTGCTTTTTAATTAACACAGCAGATCGAATAATCAGAGTTTATGATGGTAGAGAAATCTTAACCTGTGGAAGAGATGGAGAGCCTGAACCCATGCAGAAATTGCAGGACTTGGTGAATAGGACCCCATGGAAGAAATGTTGTTTCTCTGGGGATGGGGAATACATAGTGGCAGGGTCAGCCCGGCAGCATGCCCTGTACATCTGGGAGAAGAGTATTGGCAACCTGGTGAAGATTCTCCATGGGACAAGAGGAGAACTCCTCTTGGATGTAGCTTGGCATCCTGTTCGACCCATCATAGCATCCATTTCTAGTGGAGTGGTATCTATCTGGGCACAAAATCAAGTAGAAAATTGGAGTGCATTTGCGCCAGACTTCAAAGAATTGGATGAAAATGTAGAATATGAAGAAAGGGAATCAGAGTTTGATATTGAAGATGAAGATAAGAGTGAACCTGAACAGACAGGGGCTGATGCTGCAGAGGATGAGGAAGTGGATGTCACCAGTGTGGACCCTATTGCTGCCTTCTGTAGCAGTGATGAAGAGCTGGAAGATTCAAAGGCTCTATTATATTTACCCATTGCCCCTGAGGTAGAAGACCCAGAAGAAAATCCTTATGGCCCCCCACCGGATGCAGTCCAAACCTCCTTGATGGACGAAGGGGCTAGTTCAGAGAAGAAGAGGCAGTCTTCAACAGATGGGTCCCAGCCACCTAAGAAGAAACCCAAAACAACCAATATTGAACTGCAAGGAGTACCAAATGATGAAGTCCATCCACTACTGGGTGTGAAGGGGGATGGCAAATCCAAGAAGAAGCAAGCAGGCCGGCCTAAAGGATCAAAAGGTAAAGAGAAAGATTCTCCATTTAAACCGAAACTCTACAAAGGGGACAGAGGTTTACCTCTGGAAGGATCAGCGAAGGGTAAAGTGCAGGCGGAGCTCAGCCAGCCCTTGACAGCAGGGGGAGCAATCTCAGAACTGTTATGA

Related Sequences

bmy_02393T0 SequenceType object (3)

Length: 514 aa      View alignments
>bmy_02393T0
MALTCTFNRWGTLLAVGCNDGRIVIWDFLTRGIAKIISAHIHPVCSLCWSRDGHKLVSASTDNIVSQWDVLSGDCDQRFRFPSPILKVQYHPRDQNKVLVCPMKSAPVMLTLSDSKHVVLPVDDDSDLNVVASFDRRGEYIYTGNAKGKILVLKTDSQDLVASFRVTTGTSNTTAIKSIEFARKGSCFLINTADRIIRVYDGREILTCGRDGEPEPMQKLQDLVNRTPWKKCCFSGDGEYIVAGSARQHALYIWEKSIGNLVKILHGTRGELLLDVAWHPVRPIIASISSGVVSIWAQNQVENWSAFAPDFKELDENVEYEERESEFDIEDEDKSEPEQTGADAAEDEEVDVTSVDPIAAFCSSDEELEDSKALLYLPIAPEVEDPEENPYGPPPDAVQTSLMDEGASSEKKRQSSTDGSQPPKKKPKTTNIELQGVPNDEVHPLLGVKGDGKSKKKQAGRPKGSKGKEKDSPFKPKLYKGDRGLPLEGSAKGKVQAELSQPLTAGGAISELL*