Sequence detailsbmy_02395 (Coding sequence)

Part of scaffold_61 (SequenceType object (1))

For more information consult the page for scaffold_61 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

NFASCENSTTRG00000004837 (Bottlenosed dolphin)

Gene Details

neurofascin

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000004564, Bottlenosed dolphin)

Protein Percentage 93.17%
cDNA percentage 93.45%
Ka/Ks Ratio 0.19812 (Ka = 0.0183, Ks = 0.0925)

NFASCENSBTAG00000045895 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000054775, Cow)

Protein Percentage 96.33%
cDNA percentage 94.4%
Ka/Ks Ratio 0.06666 (Ka = 0.0169, Ks = 0.2533)

NFASC (Minke Whale)

Gene Details

neurofascin

External Links

Gene match (Identifier: BACU001105, Minke Whale)

Protein Percentage 99.16%
cDNA percentage 99.03%
Ka/Ks Ratio 0.1902 (Ka = 0.0053, Ks = 0.0276)

Additional orthologs identified in other species via the OPTIC pipeline.

NFASC (Human)   Nfasc (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 2928 bp    Location:1946103..1875675   Strand:-
Raw sequence 
>bmy_02395
ATGGAGCCCATCACCCAAGACAAGCGTGTCTCCCAGGGCCATAACGGAGACCTGTATTTCTCTAATGTGATGCTGCAGGACATGCAGACGGACTACAGCTGCAATGCCCGCTTCCACTTCACCCACACCATCCAGCAGAAGAACCCGTTCAACCTCAAGGTCCTTAACAACCACCCCTATAATGACTCGTCCTTAAGAAACCACCCTGACATGTACAGTGCCCGAGGAGTTGCAGAAAGAACACCCAGCTTCATGTATCCCCAGGGCACCGCGAGCAGTCAGATGGTGCTGCGTGGCATGGACCTCCTGCTGGAGTGCATCGCCTCCGGGGTGTACGTACACCCAACACCAGACATCGCATGGTACAAGAAAGGTGGGGACCTCCCATCTGACAAGGCCAAGTTTGAGAACTTTAACAAGGCCCTGCGTATCACCAACGTGTCCGAGGAAGACTCTGGGGAGTATTTCTGCCTGGCCTCCAACAAGATGGGCAGCATCCGGCACACGATCTCGGTGAGAGTAAAGGCTGCTCCCTACTGGCTGGACGAACCCAAGAACCTTATCCTGGCTCCTGGTGAGGACGGGAGACTGGTGTGTCGAGCCAATGGGAACCCCAAGCCCACCGTCCAGTGGATGGTGAATGGGGAACCTTTGCAATCGGCACCACCCAACCCAAACCGTGAGGTGGCCGGGGACACCATCATCTTCCGGGACACCCAGATCAGCAGCAGGGCCGTGTACCAGTGCAACACCTCCAACGAGCACGGCTACCTGCTGGCCAACGCCTTCGTCAGCGTGCTGGACGTGCCGCCTCGGATGCTGTCACCCCGGAACCAGCTCATCAGGGTGATCCTGTACAACCGGACGCGGCTGGACTGCCCGTTCTTTGGGTCTCCCATCCCCACACTCCGATGGTTTAAGAATGGGCAAGGAAGCAACCTGGATGGTGGCAACTACCATGTCTACGAGAACGGCAGTCTGGAAATCAAGATGATCCGCAAAGAGGACCAAGGCATCTACACCTGTGTTGCCACCAACATCCTGGGCAAAGCTGAGAACCAGGTCCGCCTGGAGGTCAAAGACCCCACCAGGATCTACCGGATGCCTGAGGACCAGGTCGCCAAAAGGGGCACCACGGTGCAGCTGGAGTGTCGCGTGAAGCACGACCCCTCCCTGAAGCTCACAGTCTCCTGGCTGAAGGACGACGAGCCCCTCTACATCGGGAACAGGATGAAGAAGGAAGAGGACTCCCTGACCATCTTTGGTGTGGCCGAGCGGGACCAGGGTAGCTACACGTGCGTTGCCAGCACTGAGCTGGACCAAGACCTGGCCAAGGCCTACCTGACCGTGCTAGCTGATCAGGCCACTCCAACTAACCGTTTGGCTGCCCTGCCCAAAGCCCCTGAGTCCAACCCCTCTGATGTGAAGGGAGAGGGGACCAGAAAGAACAACATGGAGATCACGTGGACGCCGATGAACGCCACCTCCGCCTTTGGCCCCAACCTGCGCTACATCGTCAAGTGGCGGCGGAGAGAGACCCGAGAGACCTGGAACAATGTCACTGTGTGGGGCTCCCGCTATGTGGTGGGGCAGACCCCCGTCTACGTACCCTATGAGATCCGAGTCCAGGCAGAAAATGACTTTGGGAAGGGCCCTGAACCAGGCACTGTCATCGGTTACTCCGGAGAAGATTTACCCAGTGCCCCCAGGCGTTTCCGAGTCCGGCAGCCCAACCTGGAGACAATCAACCTGGAATGGGATCATCCAGAACACCCCAATGGGATCCTGACTGGATATACTCTCAAATACGTGGCCTTTAATGGAACCAAAGTAGGAAAGCAGATAGTGGAAAACTTCTCTCCCAATCAGACCAAGTTCACGATGCAAAGAGCAGACCCCGTGTCGCGCTACCGCTTTTCCCTCAGTGCCAGGACGCAGGTGGGCTCTGGGGAAGCAGTCACAGAGGAGTCACCAGCACCCCCGAATGAAGCTCCTCCCACGTCGCCCCCGACCACAGTGGGTGTGACGGGCACGGTGGGCAGTACTGATGCCACTGCCACTGCTGCCACCACCGAAGCCACAACAGTCCCCACCATCCCAACTGTCGCACCCTCCACCATCGCCACCACCATCGTCGCCACAACTACTGCAACCACTGCCGCCGCCACCACCACGGAGAGTCCTCCCACCACCACCAGGACTAAGATTCAAGAACCCGCCCCCGATGAGCAGTCCATCTGGAACGTCACAGTGCTCCCCAACAGTAAATGGGCCAACATCACCTGGAAGCACAATTTCGGGCCCGGAACTGACTTTGTGGTTGAGTACATCGACAGCAACCATACGAAAAAAACTGTCCCTGTTAAGGCCCAGGCCCAGCCCCAGCCCATACAGCTGACAGACCTCTATCCCGGGATGACATACACGTTGCGAGTTTATTCCCGGGACAACGAGGGCATCAGCAGTACCGTCATCACCTTTATGACCAGTACAGCCTACACCAACAACCAGGCGGACATCGCCACCCAGGGCTGGTTCATTGGGCTCATGTGCGCCGTCGCCCTCCTCGTGCTGATCCTGCTCATCGTCTGTTTCATCAAGAGGAGTCGAGGCGGCAAGTACCCAGTGCGAGAAAAGAAGGATGTTCCCCTTGGCCCTGAAGACCCCAAAGAAGAGGATGGCTCCTTTGATTACAGTGACGAGGACAACAAGCCCCTGCAGGGCAGCCAGACGTCCCTGGATGGCACCATCAAGCAGCAGGAGAGCGATGACAGCCTGGTGGACTATGGCGAGGGCGGCGAGGGACAGTTCAATGAGGACGGCTCCTTCATCGGCCAGTACACAGTCAAAAAGGACAAGGAAGAGACAGAGGGCAACGAAAGCTCAGAGGCCACATCTCCTGTCAACGCCATCTATTCTCTGGCCTAA

Related Sequences

bmy_02395T0 SequenceType object (3)

Length: 976 aa      View alignments
>bmy_02395T0
MEPITQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNPFNLKVLNNHPYNDSSLRNHPDMYSARGVAERTPSFMYPQGTASSQMVLRGMDLLLECIASGVYVHPTPDIAWYKKGGDLPSDKAKFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQWMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPRMLSPRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNGQGSNLDGGNYHVYENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEVKDPTRIYRMPEDQVAKRGTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGNRMKKEEDSLTIFGVAERDQGSYTCVASTELDQDLAKAYLTVLADQATPTNRLAALPKAPESNPSDVKGEGTRKNNMEITWTPMNATSAFGPNLRYIVKWRRRETRETWNNVTVWGSRYVVGQTPVYVPYEIRVQAENDFGKGPEPGTVIGYSGEDLPSAPRRFRVRQPNLETINLEWDHPEHPNGILTGYTLKYVAFNGTKVGKQIVENFSPNQTKFTMQRADPVSRYRFSLSARTQVGSGEAVTEESPAPPNEAPPTSPPTTVGVTGTVGSTDATATAATTEATTVPTIPTVAPSTIATTIVATTTATTAAATTTESPPTTTRTKIQEPAPDEQSIWNVTVLPNSKWANITWKHNFGPGTDFVVEYIDSNHTKKTVPVKAQAQPQPIQLTDLYPGMTYTLRVYSRDNEGISSTVITFMTSTAYTNNQADIATQGWFIGLMCAVALLVLILLIVCFIKRSRGGKYPVREKKDVPLGPEDPKEEDGSFDYSDEDNKPLQGSQTSLDGTIKQQESDDSLVDYGEGGEGQFNEDGSFIGQYTVKKDKEETEGNESSEATSPVNAIYSLA*