Part of scaffold_64 (Scaffold)

For more information consult the page for scaffold_64 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

PITRM1 ENSTTRG00000015132 (Bottlenosed dolphin)

Gene Details

pitrilysin metallopeptidase 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000014361, Bottlenosed dolphin)

Protein Percentage 76.11%
cDNA percentage 77.56%
Ka/Ks Ratio 0.29903 (Ka = 0.0487, Ks = 0.1629)

PITRM1 ENSBTAG00000002685 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000043531, Cow)

Protein Percentage 80.94%
cDNA percentage 83.31%
Ka/Ks Ratio 0.2055 (Ka = 0.1155, Ks = 0.562)

PITRM1  (Minke Whale)

Gene Details

pitrilysin metallopeptidase 1

External Links

Gene match (Identifier: BACU001788, Minke Whale)

Protein Percentage 86.71%
cDNA percentage 89.28%
Ka/Ks Ratio 0.48112 (Ka = 0.0974, Ks = 0.2025)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 2619 bp    Location:1103532..1134513   Strand:+
>bmy_02403
ATGTGGCGCAGCGGGTGGAGAAGCGGGGGCGTGCTCCGGAGGCTGAGCGGCCGCAGCGCCAGCCTCGGAGCATGGAGGTGGGCGAGCACCACGGCCTGTGAGAGGGCGCTGCTGCGGTACCGGGTTGGAGATAAGATCCACAGCTTCACTGTCAGCCAGGTAACGTCTGTTCCTGAGCTGTCGCTGACCGCCGTGAAACTCAGCCATGACATCACGGGGGCACAGCACTTGCACCTGGCCAGAGAGGACAGAAACAACCTGTTCAGTGTGCAGTTCCGCACCACCCCCATGGACAGCAACGGCGCCCCGCACGTCCTGGAGCACACGGTCCTGTGCGGCTCTCAGAGGTACCCCTGCCGGGACCCCTTCTTCAAGATGCTGAACAGGTCGCTGTCTACGTTCATGAACGCCTTCACGGCTAGTGATTACACCCTGTACCCATTTTCCACACAAAACCCCAAGGACTTCCAGAACCTCCTATCCGTGTATTTGGACGCAGCCTTCTTTCCCTGCTTGCGAGAACCGGATTTCTGTCAGGAAGGATGGCGACTAGAACATGAGGATCCCAATGACCCCCAGACGCCCTTGGTCTTTAAAGGAGTCGTCTTTAACGAAATGAAGGGAGCGTTTACAGATAACGAGAGGATATTCTCGCAGCACGTTCAGAGCCACCTGCTTCCCGACCACACGTACTCAGTGGTCTCCGGAGGGGACCCCTTGTGCATCCCAGACCTCACGTGGGAGCAGCTCAGACAGTTCCACGCCACACACTACCACCCCAGCAACGCCAGGTTCTTCACTTACGGTAATTTTCCGCTAGAACAGCATCTGAAACAAATTCATGAAGAAGCACTGAGTAAATTTCAGAGAATCAAGCCACGTACCGCAGTGCCAGCCCAGAAGCCTTGGGATAAGCCTAGGGAGTTCCAGGTCACGTGTGCCCCGGACTCGCTGGCCGCGGGCTCCTCAGAGCAGACGACCATCAGTGTCAGCTTCCTCCTGCCAGAGTACAATGGCTGCACACGGGAGGCCTACTTCAGCGTGGGCCTGCAGGGTATCGCAGAGAAGGACATTCAAACAGTCYGGGACCTTGTGGATAGGACACTGGATGACGTCATCGAGAAAGGATTTGAAGATGATCGAATCGAAGCATTACTTCATAAAATTGAGATACAGATGAAGCACCAGTCTGTCAGCTTTGGACTCGCCCTGACGTCTTACATAGCTTCCTGCTGGAATCACGACGGGGACCCTGTGGAGCTTCTCAAGCTCGGGAGTCAGGTGGCTCGGTTCCGGAAGTGCCTGGAGGAAAATCCAAAGTTTTTGCAAGAAAAAGTAAAACAGTATTTTAAGAATAATCAGCATAAGTTGACTTTATCAATGAAACCAGACGACAGGTATTCCGAGAAACAAATGCAGCTGGAAACAGAAAAACTGAAGCAAAAGGTCAACTCTCTTTCCCCGGAAGACAGGCAGCAAATCTATGAAAAAGGTTTGGAATTACAGGCTCAGCAAAGTCAACCTCAGGACGCGTCGTGTCTGCCCGCGTTGAAGGTGTCAGACATCGAGCCCCGCATCCCGTTCACGGAGGTGGAGGTGGCTCTGGCAGCTGGGGACACACCCGTCCAGTACTGCACGCAGCCCACCAATGGCGTGATCTACTTCAGAGCCTTCTCGAGTCTGAACACCCTGCCCGAGGAGCTCCGGCCCTATGTGCCCCTCTTCTGCAACGTCCTCACCAAGCTGGGCTGCGGTGGCCTCGACTACAGGGAGCTGGCCCAGCAGGTGGACCTGAAGACGGGGGGCCTGGCTGCCGCCCCCCACGTGCTCCCCGACGACTCGCACCTCGACACCTACGAGCAGGGTGTGCTCTTTTCATCTTTCTGCCTCGATAGAAACCTACCAGACATGATGCATCTGTGGAGTGAAATCTTTAACAACCCCTGCTTTGAGGAGGAGGAGCACTTCCGAGTGCTGGTGAAGATGACAGCTCAGGAGCTGTCCAACGGGGTCCCCGACGCAGGCCACCTCTACGCGTCCATCAGGGCGGGCAGGACGCTGGCGCCCGCGGGGGACTTGCAGGAGACCTTCGGGGGGATGGACCAGGTGAGGCTCATGAAGAGCATCGCAGAGATGACGGACATCAAGCCCATCCTGAGGAAGCTCCCACACATCAAGAAGCATCTGTTGAACTGTGATAACTTCAGATGTTCCGTGAATGCTACGCCCCAGCAGATGTCTCAGGTGGAGAATTCGGTGGACAACTTCCTCAGGACCCTCAGCCGGAGTAAGAAGGAGCGGAAGCCTGCGCCCCCGCACGTGGTGGAGAAACCTGCACCTAAGGGGCCTGGCAGGCACTCCCTGGTCACGAGGAAGCTGGTGACGGTGAGTCCCTTCTGCTTAATGCCCTGCCCGGGGCGCATCCTTGGGCCCTTCCATCACCAGCTGGGTGTCCGTCGGGTAGGACCAGCCAGGTGCTGCCTGTGTGGACGCCTCGTGTTCAGTCCACCTCTGTTTAAACGTCACTGCCACGTGGGGGTCACCTCCCCTCCCGTGCGCCCCGCTGCCCCTGAGCTCTGGTGGCTCTGGAGGCTGGCCTGGCTTGTCCTGGGGGAGTGA

Related Sequences

bmy_02403T0 Protein

Length: 873 aa      View alignments
>bmy_02403T0
MWRSGWRSGGVLRRLSGRSASLGAWRWASTTACERALLRYRVGDKIHSFTVSQVTSVPELSLTAVKLSHDITGAQHLHLAREDRNNLFSVQFRTTPMDSNGAPHVLEHTVLCGSQRYPCRDPFFKMLNRSLSTFMNAFTASDYTLYPFSTQNPKDFQNLLSVYLDAAFFPCLREPDFCQEGWRLEHEDPNDPQTPLVFKGVVFNEMKGAFTDNERIFSQHVQSHLLPDHTYSVVSGGDPLCIPDLTWEQLRQFHATHYHPSNARFFTYGNFPLEQHLKQIHEEALSKFQRIKPRTAVPAQKPWDKPREFQVTCAPDSLAAGSSEQTTISVSFLLPEYNGCTREAYFSVGLQGIAEKDIQTVXDLVDRTLDDVIEKGFEDDRIEALLHKIEIQMKHQSVSFGLALTSYIASCWNHDGDPVELLKLGSQVARFRKCLEENPKFLQEKVKQYFKNNQHKLTLSMKPDDRYSEKQMQLETEKLKQKVNSLSPEDRQQIYEKGLELQAQQSQPQDASCLPALKVSDIEPRIPFTEVEVALAAGDTPVQYCTQPTNGVIYFRAFSSLNTLPEELRPYVPLFCNVLTKLGCGGLDYRELAQQVDLKTGGLAAAPHVLPDDSHLDTYEQGVLFSSFCLDRNLPDMMHLWSEIFNNPCFEEEEHFRVLVKMTAQELSNGVPDAGHLYASIRAGRTLAPAGDLQETFGGMDQVRLMKSIAEMTDIKPILRKLPHIKKHLLNCDNFRCSVNATPQQMSQVENSVDNFLRTLSRSKKERKPAPPHVVEKPAPKGPGRHSLVTRKLVTVSPFCLMPCPGRILGPFHHQLGVRRVGPARCCLCGRLVFSPPLFKRHCHVGVTSPPVRPAAPELWWLWRLAWLVLGE*