Sequence detailsbmy_02412 (Coding sequence)

Part of scaffold_65 (SequenceType object (1))

For more information consult the page for scaffold_65 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

MC1RENSTTRG00000005014 (Bottlenosed dolphin)

Gene Details

Melanocortin-1 receptor

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000004725, Bottlenosed dolphin)

Protein Percentage 92.67%
cDNA percentage 90.23%
Ka/Ks Ratio 0.02796 (Ka = 0.0351, Ks = 1.2555)

TUBB3ENSBTAG00000023730 (Cow)

Gene Details

Tubulin beta-3 chain

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000000568, Cow)

Protein Percentage 92.91%
cDNA percentage 89.13%
Ka/Ks Ratio 0.02641 (Ka = 0.0353, Ks = 1.3359)

TUBB3 (Minke Whale)

Gene Details

tubulin, beta 3 class III

External Links

Gene match (Identifier: BACU004265, Minke Whale)

Protein Percentage 92.67%
cDNA percentage 90.46%
Ka/Ks Ratio 0.03111 (Ka = 0.0352, Ks = 1.1301)

Additional orthologs identified in other species via the OPTIC pipeline.

TUBB6 (Human)   Tubb6 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 1269 bp    Location:365490..374297   Strand:+
Raw sequence 
>bmy_02412
ATCAGCGACGAACATGGCATCGACCCTGCTGGAGGCTACGTGGGTGACTCGACGCTCCAACTGGAGAGGATCAACGTCTACTACAATGAGTCATCGTCTCAGAAGTATGTGCCCAGGGCTGCCCTGGTGGACTTGGAGCCAGGCACCATGGACAGCGTGCGGTCTGGGCCTTTCGGGCAGCTCTTCCGGCCTGACAACTTCATCTTCGGACAGACTGGCGCCGGGAACAACTGGGCCAAAGGCCACTACACGGAGGGCGCCGAGCTGGTGGACTCGGTCCTGGACGTGGTGCGGAAGGAGTGCGAGCACTGCGACTGCCTGCAGGGCTTCCAGCTGACCCACTCGCTGGGCGGCGGCACCGGTTCTGGGATGGGCACTCTCCTCATCAGCAAGATCCGCGAGGAGTACCCCGACCGCATCATGAACACCTTCAGCGTGATGCCCTCGCCCAAGGTGTCGGACACGGTGGTGGAGCCCTACAATGCCACCCTCTCCGTGCACCAGCTGGTGGAGAACACGGACGAGACCTACTGCATCGACAACGAGGCCCTGTACGACATCTGCTTCCGCACCCTGAAACTGACCACGCCCACCTACGGGGACCTCAACCACCTGGTGTCGGCCACCATGAGCGGGGTCACCACCTCCCTGCGCTTCCCCGGCCAGCTCAACGCCGATTTGCGCAAGCTGGCCGTGAACATGGTGCCCTTCCCGCGCCTGCACTTCTTCATGCCCGGCTTTGCCCCGCTCACCGCCCGTGGCAGCCAGCAGTACCGGGCGCTGACGGTGCCCGAGCTCACCCAGCAGATGTTCGATGCCAAGAATATGATGGCGGCCTGTGATCCCCGCCACGGCCGCTACCTGACCGTGGCCGCCGTGTTCCGGGGCCCCATGTCCATGAAGGAGGTGGATGAGCAGATGCTGGCCATCCAGAACAAGAACAGCAGCTACTTCGTGGAGTGGATCCCCAACAACGTGAAGGTGGCCGTGTGCGACATACCGCCGCGCGGCCTGAAGATGGCCGCCACCTTCATCGGCAACAGCACAGCCATCCAGGAGCTGTTCAAGCGCATCTCGGAGCAGTTCTCGGCCATGTTCCGGCGCAAGGCCTTCCTGCACTGGTTCACGGGTGAGGGCATGGACGAGATGGAGTTCACTGAGGCCGAGAGCAACATGAACGACCTGGTGTCTGAGTACCAGCAGTACCAGGACGCCACAGCCGACGAGGGCGAGGAAGCTTTTGAGGACGACGAGGAGGAGGTCAACGAA

Related Sequences

bmy_02412T0 SequenceType object (3)

Length: 423 aa      View alignments
>bmy_02412T0
ISDEHGIDPAGGYVGDSTLQLERINVYYNESSSQKYVPRAALVDLEPGTMDSVRSGPFGQLFRPDNFIFGQTGAGNNWAKGHYTEGAELVDSVLDVVRKECEHCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVMPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTSLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTARGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAVFRGPMSMKEVDEQMLAIQNKNSSYFVEWIPNNVKVAVCDIPPRGLKMAATFIGNSTAIQELFKRISEQFSAMFRRKAFLHWFTGEGMDEMEFTEAESNMNDLVSEYQQYQDATADEGEEAFEDDEEEVNE