Sequence details bmy_02424 (Coding sequence)

Part of scaffold_65 (Scaffold)

For more information consult the page for scaffold_65 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SEH1L ENSTTRG00000012265 (Bottlenosed dolphin)

Gene Details

SEH1-like (S. cerevisiae)

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000011634, Bottlenosed dolphin)

Protein Percentage 96.55%
cDNA percentage 96.17%
Ka/Ks Ratio 0.33055 (Ka = 0.027, Ks = 0.0817)

SEH1L ENSBTAG00000010792 (Cow)

Gene Details

Nucleoporin SEH1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000045994, Cow)

Protein Percentage 95.97%
cDNA percentage 93.62%
Ka/Ks Ratio 0.1229 (Ka = 0.0247, Ks = 0.2009)

SEH1L  (Minke Whale)

Gene Details

SEH1-like (S. cerevisiae)

External Links

Gene match (Identifier: BACU019926, Minke Whale)

Protein Percentage 70.1%
cDNA percentage 74.09%
Ka/Ks Ratio 0.63946 (Ka = 0.2893, Ks = 0.4524)

Additional orthologs identified in other species via the OPTIC pipeline.

SEH1L (Human)   Seh1l (Mouse)  

Genome Location

Sequence Coding sequence

Length: 1116 bp    Location:879439..900723   Strand:+
Raw sequence 
>bmy_02424
ATGACGGGCCGGGGGGCGGGGCTCGGCGCGGCACAGCCCGGGGCGCGCGAGCGGCCCGCGGGAAACACAGCCGTGCGCGCCCCGGAGCCGGGTCCGGGTGGGCTGCGGTCCGCGCGCCGCCGCGCCGTCCTGTTGGAGGAGGGAGGGGCTGGCGCAGCCATGTTCGTGGCGCGCAGCATCGCGGCGGACCACAAAGATCTCATCCACGATGTGTCTTTCGATTTCCACGGACGGCGGATGGCCACCTGCTCCAGTGACCAGAGCGTCAAGGTCTGGGATAAAAGTGAAAGTGGGGATTGGCATTGCACTGCTAGCTGGAAGACACATAGTGGATCTGTGTGGCGTGTGACATGGGCCCATCCGGAATTTGGACAGGTTTTGGCTTCCTGTTCTTTTGACCGAACAGCTGCTGTCTGGGAAGAAATAGTAGGAGAATCAAATGATAAACTGCGTGGACAGAGCCATTGGGTGAGACATTTGTTAGCGGTGGGTTGCTCTCGTGCTCATTCCCCCATGATCGCTGTAGGAAGTGATGACAGCAGCCCAAACGCAATGGCCAAGGTTCAGATTTTCGAATATAATGAAAACACCAGTTATGCATTATTCGTCACATATTTACTGATTTCCTATGATACGCTAAGTTCTCTGCTCTGGAAATATGCAAAAGCTGAAACCCTCCTGACAGTCACAGATCCTGTCCACGATATCGCCTTTGCTCCAAACTTGGGACGGTCTTTCCACATTCTCGCCATAGCAACCAAAGACGTGAGAATTTTTACATTAAAGCCTGTGAGGAAAGAACTTACTTCCTCTGGTGGGCCAACAAAATTTGAAATCCATATAGTGGCTCAGTTTGATAATCATAATTCTCAGGTCTGGCGAGTGAGTTGGAATATAACAGGGACAGTGCTGGCATCTTCAGGAGATGATGGCTGTGTCAGGTTGTGGAAAGCTAATTATATGGACAACTGGAAGTGTACTGGTATTCTGAAAGGTAATGGGAGCCCTGTCAATGGGAGCTCTCAGCAGGGAAACTCAAATCCTTCCCTAGGTTCAAATATCCCAAATCTTCAGAATTCATTAAATGGATCTTCTGCTGGCAGAAAGCACAGCTGA

Related Sequences

bmy_02424T0 Protein

Length: 372 aa      View alignments
>bmy_02424T0
MTGRGAGLGAAQPGARERPAGNTAVRAPEPGPGGLRSARRRAVLLEEGGAGAAMFVARSIAADHKDLIHDVSFDFHGRRMATCSSDQSVKVWDKSESGDWHCTASWKTHSGSVWRVTWAHPEFGQVLASCSFDRTAAVWEEIVGESNDKLRGQSHWVRHLLAVGCSRAHSPMIAVGSDDSSPNAMAKVQIFEYNENTSYALFVTYLLISYDTLSSLLWKYAKAETLLTVTDPVHDIAFAPNLGRSFHILAIATKDVRIFTLKPVRKELTSSGGPTKFEIHIVAQFDNHNSQVWRVSWNITGTVLASSGDDGCVRLWKANYMDNWKCTGILKGNGSPVNGSSQQGNSNPSLGSNIPNLQNSLNGSSAGRKHS*