Part of scaffold_65 (Scaffold)

For more information consult the page for scaffold_65 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

DGCR8 ENSTTRG00000008121 (Bottlenosed dolphin)

Gene Details

DGCR8 microprocessor complex subunit

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000007693, Bottlenosed dolphin)

Protein Percentage 92.75%
cDNA percentage 92.22%
Ka/Ks Ratio 0.06473 (Ka = 0.0029, Ks = 0.0442)

bta-mir-1306 ENSBTAG00000019869 (Cow)

Gene Details

bta-mir-1306

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000026474, Cow)

Protein Percentage 96.18%
cDNA percentage 89.63%
Ka/Ks Ratio 0.02657 (Ka = 0.0196, Ks = 0.7362)

DGCR8  (Minke Whale)

Gene Details

DGCR8 microprocessor complex subunit

External Links

Gene match (Identifier: BACU017092, Minke Whale)

Protein Percentage 99.8%
cDNA percentage 99.35%
Ka/Ks Ratio 0.0385 (Ka = 0.0009, Ks = 0.0229)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1536 bp    Location:1697228..1676152   Strand:-
>bmy_02438
ATGGAGGAGAAATATGGAGGAGACAGCGACCACCCGTCAGACGGAGAGACAAGTGTGCAGCCAATGATGACCAAGATTAAAACAGTGCTCAAAAGTCGTGGCCGCCCACCTACAGAACCACTGCCGGACGGGTGGATCATGACGTTCCATAACTCCGGAGTCCCCGTGTACCTGCACCGAGAGTCTCGGGTGGTCACCTGGTCCAGGCCATACTTCTTGGGAACGGGAAGCATACGGAAACATGACCCTCCTCTGAGTAGCATCCCCTGTCTGCATTACAAGAAAATGAAAGACAATGAGGAAAGGGAGCAAAACAGCGAGCTCTCCCCCTGTGGGGAGGTGTCCCCTGCCAAGCCCCTGAGCCGATCTGCAGAGCTGGAGCTCCCCCTGGAAGAGCCCGACTCCTTGGGGGCTGACTTGGGGCCCCCAGATGAGAAGGACCCACTGGGGGCCGAGGCCGCCCCCGGGGCCCTGGGGCAAGTGAAGGCCAAGGTGGAAGTGTGCAAAGATGAATCAGTTGACCTCGAGGAGTTTCGGAACTACCTGGAGAAGCGCTTTGACTTCGAGCAAGTTACCGTGAAGAAGTTCAGGACATGGGCTGAGCGTCGGCAGTTCAACCGAGAAATGAAGCGAAAACAAGCTGAGTCAGAGAGGCCCATCCTGCCGGCCAATCAGAAGCTCATCACTCTGTCTGTGCAGGACGCGCCCACGAAGAAAGAGTTTGTCATCAACCCCAATGGGAAGTCGGAGGTCTGCATCCTGCACGAGTACATGCAGCGCGTCCTCAAGGTCCGCCCTGTGTACAACTTCTTTGAATGTGAGAACCCAAGTGAGCCTTTTGGTGCCTCGGTGACCATCGACGGTGTGACCTATGGATCTGGAACGGCAAGCAGCAAAAAACTTGCGAAGAATAAAGCTGCCCGGGCCACGCTGGAAATCCTCATCCCGGACTTTGTTAAACAGACCTCTGAGGAGAAGCCCAAAGACAGCGAGGAGCTGGAGTATTTTAACCACATCAGTATCGAGGACTCGCGAGTCTACGAGCTGACCAGCAAGGCTGGACTGCTATCTCCCTACCAGATCCTCCATGAGTGCCTTAAAAGAAACCATGGGATGGGGGACACCTCCATCAAGTTTGAAGTGGTTCCTGGTAAAAACCAGAAGAGTGAATATGTCATGGCGTGTGGCAAGCACACAGTGCGCGGCTGGTGCAAGAATAAGCGAGTCGGGAAACAGTTAGCTTCTCAGAAGATCCTTCAGCTGCTGCACCCACACGTCAAGAACTGGGGGTCCTTGCTGCGCATGTACGGCCGTGAAAGCAGCAAGATGGTCAAACAGGAGACGTCGGACAAGAGTGTGATTGAGCTGCAGCAGTTTGCCCGGAAGAACAAGCCCAACCTGCACATCCTGAGCAAACTGCAGGAGGAGATGCGGAGGCTGGCGGAGGAGAGGGAGGAGACGCGGAAGAAGCCCAAGATGTCCATTGTGGCGTCTGCACAGCCTGGCGGCGAGCCCCTGTGCACTGTGGACGTGTGA

Related Sequences

bmy_02438T0 Protein

Length: 512 aa      View alignments
>bmy_02438T0
MEEKYGGDSDHPSDGETSVQPMMTKIKTVLKSRGRPPTEPLPDGWIMTFHNSGVPVYLHRESRVVTWSRPYFLGTGSIRKHDPPLSSIPCLHYKKMKDNEEREQNSELSPCGEVSPAKPLSRSAELELPLEEPDSLGADLGPPDEKDPLGAEAAPGALGQVKAKVEVCKDESVDLEEFRNYLEKRFDFEQVTVKKFRTWAERRQFNREMKRKQAESERPILPANQKLITLSVQDAPTKKEFVINPNGKSEVCILHEYMQRVLKVRPVYNFFECENPSEPFGASVTIDGVTYGSGTASSKKLAKNKAARATLEILIPDFVKQTSEEKPKDSEELEYFNHISIEDSRVYELTSKAGLLSPYQILHECLKRNHGMGDTSIKFEVVPGKNQKSEYVMACGKHTVRGWCKNKRVGKQLASQKILQLLHPHVKNWGSLLRMYGRESSKMVKQETSDKSVIELQQFARKNKPNLHILSKLQEEMRRLAEEREETRKKPKMSIVASAQPGGEPLCTVDV*