Part of scaffold_65 (Scaffold)

For more information consult the page for scaffold_65 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

DGCR2 ENSTTRG00000006835 (Bottlenosed dolphin)

Gene Details

DiGeorge syndrome critical region gene 2

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000006462, Bottlenosed dolphin)

Protein Percentage 83.13%
cDNA percentage 82.38%
Ka/Ks Ratio 0.17254 (Ka = 0.022, Ks = 0.1276)

BT.56883 ENSBTAG00000000429 (Cow)

Gene Details

integral membrane protein DGCR2/IDD precursor

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000029411, Cow)

Protein Percentage 90.43%
cDNA percentage 87.09%
Ka/Ks Ratio 0.04678 (Ka = 0.0448, Ks = 0.9566)

DGCR2  (Minke Whale)

Gene Details

DiGeorge syndrome critical region gene 2

External Links

Gene match (Identifier: BACU017112, Minke Whale)

Protein Percentage 97.76%
cDNA percentage 97.49%
Ka/Ks Ratio 0.1761 (Ka = 0.0132, Ks = 0.0751)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1479 bp    Location:2303445..2327874   Strand:+
>bmy_02459
ATGCAGGCAGCCCCAACTTGGAACCTTAGGAGTTGTGAAGTGATTGGGGAGGCGCGTCCTTACCATGGGAAGGAGGCTGTGGATCCGAGGCCGGGGCGGGCTCGAGGTGGTGACCCCACGCACTTCCATGCCATGAACGTGGCACAGCCCGTCCGCTTCAGCAGGAAGTGCCCGACAGGGTGGCACCACTACGAGGGCACGGCCAGCTGCTACCGAGTCTACCTGAGCGGGGAGAACTACTGGGATGCCGCGCAGACCTGCCAGCGCGTGAACGGGTCCCTCGCCACCTTCTCCACTGACCAGGAGCTGCGCTTCGTCCTGGCCCAGGAATGGGACCAGCCCGAGCGGAGCTTCGCGTGGCAGGACCAGCACAAGTTGTGGGTCGGCTACCAGTACGTCATCACTGGCCGGAACCGCTCCTTAGAAGGTCACTGGGAGGTGGCATTCAAAGGCTCCTCAGAGGTGCTCCTGCCCCCAGACCCCATCTTCGCGGCGGCCACGTCAGAGGGTGACGGCGTGTTCTGCGCGCAGCTGCAGTGCTTCCACTTCCCCACGCTCCGCCACCACGACCTGCACAGCTGGCATGCCGAGAGCTGCCACGACAAGTCCTCGTTTCTGTGTAAAAGAAGTCAGACGTGTGTCGACATCAAGGACAACGTTGTGGATGAAGGGTTCTACTTCACCCCCAAAGGAGACGACCCATGCCTGAGCTGCACCTGTCACAGAGGGGAGCCCGAGATGTGCGTAGCTGCCCTGTGCGAGCGGCCCCAGGGCTGCCAGCAGTACCGCAAGGACCCTAAGGAGTGCTGCAAGTTCATGTGCCTGGACCCAGACGGCAGCAGCCTGCTGGACTCCATGGCCAGCGGGATGCGTCTGATTGTGAGCTGCGTGTCCTCCTTCCTCATCCTGTCGCTGCTGCTCTTCATGGTCCATCGGCTGCGCCAGAGGCGCCGGGAGCGCATTGAGTCCCTGATTGGAGCAAACCTGCACCACTTCAACCTTGGCCGAAGGATCCCCGGCTTTGATTATGGCCCAGATGGGTTCGGCACGGGCCTCACACCGCTGCATCTCTCCGACGATGGGGAAGGCGGTACTTTCCATTTCCATGACCCTCCCCCTCCCTACACCGCGTACAAGTACCCGGACATCGACCAACCCGATGACCCGCCGCCACCCTATGAGGCCTCCATCAACCCGGACAGCATGTTCTACGACCCTGCAGATGATGACGCCTTTGAGCCAGCAGAGGCCGCCCCACCGACCACAGGGGATGGTGGTGGTGAGGGTGCAGCACCCCGGCTCCTGGAGCAGCCCCTGCCCACCCCCAGGGCCTCTCTGGCCGAACTGGAAGACTCAGCCGACAGCAGCAGTGTCCTCCTCGTGCCCCCTGACCCTGCCCAGAGTGGCAGTGCCCTGGCCACAGAGGCGCTGCCGGGGGGCGGCCGCCGCAGCCGAAGTTCCCTCAATACCGTGGTGTAG

Related Sequences

bmy_02459T0 Protein

Length: 493 aa      View alignments
>bmy_02459T0
MQAAPTWNLRSCEVIGEARPYHGKEAVDPRPGRARGGDPTHFHAMNVAQPVRFSRKCPTGWHHYEGTASCYRVYLSGENYWDAAQTCQRVNGSLATFSTDQELRFVLAQEWDQPERSFAWQDQHKLWVGYQYVITGRNRSLEGHWEVAFKGSSEVLLPPDPIFAAATSEGDGVFCAQLQCFHFPTLRHHDLHSWHAESCHDKSSFLCKRSQTCVDIKDNVVDEGFYFTPKGDDPCLSCTCHRGEPEMCVAALCERPQGCQQYRKDPKECCKFMCLDPDGSSLLDSMASGMRLIVSCVSSFLILSLLLFMVHRLRQRRRERIESLIGANLHHFNLGRRIPGFDYGPDGFGTGLTPLHLSDDGEGGTFHFHDPPPPYTAYKYPDIDQPDDPPPPYEASINPDSMFYDPADDDAFEPAEAAPPTTGDGGGEGAAPRLLEQPLPTPRASLAELEDSADSSSVLLVPPDPAQSGSALATEALPGGGRRSRSSLNTVV*