Part of scaffold_65 (Scaffold)

For more information consult the page for scaffold_65 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SCARF2 ENSTTRG00000004660 (Bottlenosed dolphin)

Gene Details

scavenger receptor class F, member 2

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000004398, Bottlenosed dolphin)

Protein Percentage 83.68%
cDNA percentage 83.27%
Ka/Ks Ratio 0.13769 (Ka = 0.0204, Ks = 0.1482)

SCARF2 ENSBTAG00000019375 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000025815, Cow)

Protein Percentage 97.33%
cDNA percentage 94.02%
Ka/Ks Ratio 0.02344 (Ka = 0.0107, Ks = 0.4562)

SCARF2  (Minke Whale)

Gene Details

scavenger receptor class F, member 2

External Links

Gene match (Identifier: BACU017115, Minke Whale)

Protein Percentage 65.4%
cDNA percentage 72.69%
Ka/Ks Ratio 0.27322 (Ka = 0.2865, Ks = 1.0487)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 2568 bp    Location:2395577..2389769   Strand:-
>bmy_02462
TCCCAGGAGCTCACTTGCTGCGCTGGCTGGAGGCAGCAGGGGGACGAGTGTGGGATCGCTGTGTGCGAAGGCAACTCCACGTGCTCGGAGAACGAGGTGTGCGTGCGGCCGGGCGAGTGCCGCTGCCGCCATGGCTACTTCGGTGCCAACTGCGACACCAAGTGCCCGCGCCAGTTCTGGGGTCCCGACTGCAAGGAGCTGTGTGTCTGCCACCCACACGGGCAGTGCGAGGACGTGACGGGCCAGTGTACATGTCACGCGCGGCGCTGGGGCGCACGCTGCGAGCATGCGTGCCAATGCCAGCACGGCGCGTGCCACCCGCGGAGCGGCGCGTGTCGCTGCGAGCCTGGCTGGTGGGGCCCACAGTGCGCCAGCGCGTGCTACTGCAGCGCCACGTCGCGCTGCGACCCACAGACGGGCGCGTGCCTCTGCCACGCAGGCTGGTGGGGCCGCAGCTGCAACAACCAGTGTGCCTGCAACACGTCGCCGTGCGAGCAACAGAGCGGCCGCTGCCAGTGCCGCGAGCGCACGTTCGGCGCGCGCTGCGAGCGCTATTGCCAGTGCTTCCGCGGCCGCTGCCATCCAGTGGACGGCACGTGCGCGTGCGAGCCCGGTTACCGGGGCAAGTACTGCCGCGAGCCTTGCCCTGCCGGCTTCTACGGCCTGGGCTGCCGCCGCCGATGCGGCCAGTGCAAGGGCCAGCAGCCATGCACGGTGGCCGAGGGCCGTTGCCTGACGTGCGAGCCCGGCTGGAATGGCACCAAGTGCGACCAGCCGTGCGCCACCGGCTTCTACGGCGAGGGCTGCGGCCACCGCTGCCCGCCGTGTCGCGACGGACACGCCTGCAACCACGTCACCGGCAAGTGCACGCGCTGCAACGCGGGCTGGATCGGTGACCGGTGTGAGACCAAGTGCAGCAATGGCACCTACGGCGAGGACTGCGCGTTCGTGTGCGCCGACTGCGGCAGCGGCCACTGCGACTTCCAGTCGGGACGTTGCCTATGCAGCCCGGGCGTCCACGGGCCCCACTGTAACCTGACTTGCCCGCCCGGGCTCCACGGCGTGGACTGCGCCCAGGCCTGCAGCTGCCACGAGGACTCGTGCGACCCGGTCACCGGTGCCTGCCGCCTGGGTGAGTGGGTGGGGGCGACCCGGCGGGGGCGCGGGGGCTGCCGGCACCTCGCTGACCCTGTGACCCCCACAGAGACCAACCAGCGAAAGGGCGTGATGGGCGCGGGCGCGCTGCTCGCCCTGCTCCTCGGCCTGCTGCTCTCGTTGCTCGGCTGCTGCTGCGCCTGCCGCGGCAAGGACCCCGCGCGCGGGCGCGGCTCCGCCCCCTCGCTCAGACCCCGCCCCCGCAGGGAGCTCTCGCTTGGGAGGAAGAAGGCGCCGCAGCGCCTATGCGGGCGCTTCAGCCGCATCAGCATGAAGCTGCCCCGGATCCCGCTCCGCAGGCAGAAGCTGCCCAAGGTCGTAGGTAAGGATGACGTAGTGGCCCATCACGACCTGGATAACACGCTCAACTGCAGCTTCCTGGAGCCGCCCTCGGGGCTGGAGCAGCCCTCGCCATCATGGTCCTCCCGGGCCTCCTTCTCCTCCTTTGACACCACGGATGAAGGCCCTGTATACTGCGTACCCCACGAGGAGGCGGCAACCGAGAGCCGGGACGCGGAGGCCCCCACCGCCCCAGCCCCTGCCCCTGCCCCTGCCCCTGCCGAGGCGCTGGCTTCGTCCCCTGCACCGGTGACTACGCCCGCGGAGGAGGCCACGCCCCTCCGCGCGTCCTCCGACAGCGAGCGGTCGGCGTCGAGCGGGGACGGGCCCGGTGGGGCGCTGTATGCGCGTGTGGCCCGGCGCGAGGCCCGGCCGGCCCGGGTCCGGGGCGAGGCCCGAGGCCTGTCGCTTTCGCCATCGCCCGAGCGCAGGAAGCCGCCGCCGCCCGACCCCGCCACCAAGCCCAAGGTGTCCTGGATCCACGGCAAGCACGGTGCCGCCGCCGCGCGTGCGCCGTCGCCGCCACCCGCGGGCCCCGAGGCCGCTCCCAGCCCCAGCAAGAGGAAACGGACGCCCAGCGACACGTCGGCGCGGCCGGACGAGCCCTGCAGCCCCAGGGCCCGCGACCCGACGCCGCGGCCCCCGGGGCTGGCCGAGGAGGGGCCGGCCCTCGCCGCACCCTCGCCGCCCCGGGCTCGGGCGCGTGGCCGTGGCCCGGGCCTCTCAGAGCCCACGGACGCTGGCGGTCCCCCGCGCAGCGCACCTGAGGCCGCCTCCATGCTGGCCGCCGAGCTGCGCGACAAGACTCGCAGCCTGGGCCGCGCCGAGGGGGCCGTGGGCACGCAGGGCCCCCGAGAGAAGCCGGCGCCGCCGCAGAAGGCCAAGCGCTCGGTGCCTCCCGCCTCGCCGGCCCGCGCGCCCCCCGCGCCCGAGGCCCCAGGGCCCGAGAAGGCGGCAGCGGGCGCGCCCGGATCCGACACCCCCCGAAAGAAGACCCCCATCCAGAAGCCGCCTCGCAAGAAGAGCCGGGAGGTGGCTGGCGAGCCGGGCCGGGTGGGCGCGCCCACCCTGTAG

Related Sequences

bmy_02462T0 Protein

Length: 856 aa      View alignments
>bmy_02462T0
SQELTCCAGWRQQGDECGIAVCEGNSTCSENEVCVRPGECRCRHGYFGANCDTKCPRQFWGPDCKELCVCHPHGQCEDVTGQCTCHARRWGARCEHACQCQHGACHPRSGACRCEPGWWGPQCASACYCSATSRCDPQTGACLCHAGWWGRSCNNQCACNTSPCEQQSGRCQCRERTFGARCERYCQCFRGRCHPVDGTCACEPGYRGKYCREPCPAGFYGLGCRRRCGQCKGQQPCTVAEGRCLTCEPGWNGTKCDQPCATGFYGEGCGHRCPPCRDGHACNHVTGKCTRCNAGWIGDRCETKCSNGTYGEDCAFVCADCGSGHCDFQSGRCLCSPGVHGPHCNLTCPPGLHGVDCAQACSCHEDSCDPVTGACRLGEWVGATRRGRGGCRHLADPVTPTETNQRKGVMGAGALLALLLGLLLSLLGCCCACRGKDPARGRGSAPSLRPRPRRELSLGRKKAPQRLCGRFSRISMKLPRIPLRRQKLPKVVGKDDVVAHHDLDNTLNCSFLEPPSGLEQPSPSWSSRASFSSFDTTDEGPVYCVPHEEAATESRDAEAPTAPAPAPAPAPAEALASSPAPVTTPAEEATPLRASSDSERSASSGDGPGGALYARVARREARPARVRGEARGLSLSPSPERRKPPPPDPATKPKVSWIHGKHGAAAARAPSPPPAGPEAAPSPSKRKRTPSDTSARPDEPCSPRARDPTPRPPGLAEEGPALAAPSPPRARARGRGPGLSEPTDAGGPPRSAPEAASMLAAELRDKTRSLGRAEGAVGTQGPREKPAPPQKAKRSVPPASPARAPPAPEAPGPEKAAAGAPGSDTPRKKTPIQKPPRKKSREVAGEPGRVGAPTL*