Sequence detailsbmy_02462 (Coding sequence)

Part of scaffold_65 (SequenceType object (1))

For more information consult the page for scaffold_65 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SCARF2ENSTTRG00000004660 (Bottlenosed dolphin)

Gene Details

scavenger receptor class F, member 2

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000004398, Bottlenosed dolphin)

Protein Percentage 83.68%
cDNA percentage 83.27%
Ka/Ks Ratio 0.13769 (Ka = 0.0204, Ks = 0.1482)

SCARF2ENSBTAG00000019375 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000025815, Cow)

Protein Percentage 97.33%
cDNA percentage 94.02%
Ka/Ks Ratio 0.02344 (Ka = 0.0107, Ks = 0.4562)

SCARF2 (Minke Whale)

Gene Details

scavenger receptor class F, member 2

External Links

Gene match (Identifier: BACU017115, Minke Whale)

Protein Percentage 65.4%
cDNA percentage 72.69%
Ka/Ks Ratio 0.27322 (Ka = 0.2865, Ks = 1.0487)

Additional orthologs identified in other species via the OPTIC pipeline.

SCARF2 (Human)   Scarf2 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 2568 bp    Location:2395577..2389769   Strand:-
Raw sequence 
>bmy_02462
TCCCAGGAGCTCACTTGCTGCGCTGGCTGGAGGCAGCAGGGGGACGAGTGTGGGATCGCTGTGTGCGAAGGCAACTCCACGTGCTCGGAGAACGAGGTGTGCGTGCGGCCGGGCGAGTGCCGCTGCCGCCATGGCTACTTCGGTGCCAACTGCGACACCAAGTGCCCGCGCCAGTTCTGGGGTCCCGACTGCAAGGAGCTGTGTGTCTGCCACCCACACGGGCAGTGCGAGGACGTGACGGGCCAGTGTACATGTCACGCGCGGCGCTGGGGCGCACGCTGCGAGCATGCGTGCCAATGCCAGCACGGCGCGTGCCACCCGCGGAGCGGCGCGTGTCGCTGCGAGCCTGGCTGGTGGGGCCCACAGTGCGCCAGCGCGTGCTACTGCAGCGCCACGTCGCGCTGCGACCCACAGACGGGCGCGTGCCTCTGCCACGCAGGCTGGTGGGGCCGCAGCTGCAACAACCAGTGTGCCTGCAACACGTCGCCGTGCGAGCAACAGAGCGGCCGCTGCCAGTGCCGCGAGCGCACGTTCGGCGCGCGCTGCGAGCGCTATTGCCAGTGCTTCCGCGGCCGCTGCCATCCAGTGGACGGCACGTGCGCGTGCGAGCCCGGTTACCGGGGCAAGTACTGCCGCGAGCCTTGCCCTGCCGGCTTCTACGGCCTGGGCTGCCGCCGCCGATGCGGCCAGTGCAAGGGCCAGCAGCCATGCACGGTGGCCGAGGGCCGTTGCCTGACGTGCGAGCCCGGCTGGAATGGCACCAAGTGCGACCAGCCGTGCGCCACCGGCTTCTACGGCGAGGGCTGCGGCCACCGCTGCCCGCCGTGTCGCGACGGACACGCCTGCAACCACGTCACCGGCAAGTGCACGCGCTGCAACGCGGGCTGGATCGGTGACCGGTGTGAGACCAAGTGCAGCAATGGCACCTACGGCGAGGACTGCGCGTTCGTGTGCGCCGACTGCGGCAGCGGCCACTGCGACTTCCAGTCGGGACGTTGCCTATGCAGCCCGGGCGTCCACGGGCCCCACTGTAACCTGACTTGCCCGCCCGGGCTCCACGGCGTGGACTGCGCCCAGGCCTGCAGCTGCCACGAGGACTCGTGCGACCCGGTCACCGGTGCCTGCCGCCTGGGTGAGTGGGTGGGGGCGACCCGGCGGGGGCGCGGGGGCTGCCGGCACCTCGCTGACCCTGTGACCCCCACAGAGACCAACCAGCGAAAGGGCGTGATGGGCGCGGGCGCGCTGCTCGCCCTGCTCCTCGGCCTGCTGCTCTCGTTGCTCGGCTGCTGCTGCGCCTGCCGCGGCAAGGACCCCGCGCGCGGGCGCGGCTCCGCCCCCTCGCTCAGACCCCGCCCCCGCAGGGAGCTCTCGCTTGGGAGGAAGAAGGCGCCGCAGCGCCTATGCGGGCGCTTCAGCCGCATCAGCATGAAGCTGCCCCGGATCCCGCTCCGCAGGCAGAAGCTGCCCAAGGTCGTAGGTAAGGATGACGTAGTGGCCCATCACGACCTGGATAACACGCTCAACTGCAGCTTCCTGGAGCCGCCCTCGGGGCTGGAGCAGCCCTCGCCATCATGGTCCTCCCGGGCCTCCTTCTCCTCCTTTGACACCACGGATGAAGGCCCTGTATACTGCGTACCCCACGAGGAGGCGGCAACCGAGAGCCGGGACGCGGAGGCCCCCACCGCCCCAGCCCCTGCCCCTGCCCCTGCCCCTGCCGAGGCGCTGGCTTCGTCCCCTGCACCGGTGACTACGCCCGCGGAGGAGGCCACGCCCCTCCGCGCGTCCTCCGACAGCGAGCGGTCGGCGTCGAGCGGGGACGGGCCCGGTGGGGCGCTGTATGCGCGTGTGGCCCGGCGCGAGGCCCGGCCGGCCCGGGTCCGGGGCGAGGCCCGAGGCCTGTCGCTTTCGCCATCGCCCGAGCGCAGGAAGCCGCCGCCGCCCGACCCCGCCACCAAGCCCAAGGTGTCCTGGATCCACGGCAAGCACGGTGCCGCCGCCGCGCGTGCGCCGTCGCCGCCACCCGCGGGCCCCGAGGCCGCTCCCAGCCCCAGCAAGAGGAAACGGACGCCCAGCGACACGTCGGCGCGGCCGGACGAGCCCTGCAGCCCCAGGGCCCGCGACCCGACGCCGCGGCCCCCGGGGCTGGCCGAGGAGGGGCCGGCCCTCGCCGCACCCTCGCCGCCCCGGGCTCGGGCGCGTGGCCGTGGCCCGGGCCTCTCAGAGCCCACGGACGCTGGCGGTCCCCCGCGCAGCGCACCTGAGGCCGCCTCCATGCTGGCCGCCGAGCTGCGCGACAAGACTCGCAGCCTGGGCCGCGCCGAGGGGGCCGTGGGCACGCAGGGCCCCCGAGAGAAGCCGGCGCCGCCGCAGAAGGCCAAGCGCTCGGTGCCTCCCGCCTCGCCGGCCCGCGCGCCCCCCGCGCCCGAGGCCCCAGGGCCCGAGAAGGCGGCAGCGGGCGCGCCCGGATCCGACACCCCCCGAAAGAAGACCCCCATCCAGAAGCCGCCTCGCAAGAAGAGCCGGGAGGTGGCTGGCGAGCCGGGCCGGGTGGGCGCGCCCACCCTGTAG

Related Sequences

bmy_02462T0 SequenceType object (3)

Length: 856 aa      View alignments
>bmy_02462T0
SQELTCCAGWRQQGDECGIAVCEGNSTCSENEVCVRPGECRCRHGYFGANCDTKCPRQFWGPDCKELCVCHPHGQCEDVTGQCTCHARRWGARCEHACQCQHGACHPRSGACRCEPGWWGPQCASACYCSATSRCDPQTGACLCHAGWWGRSCNNQCACNTSPCEQQSGRCQCRERTFGARCERYCQCFRGRCHPVDGTCACEPGYRGKYCREPCPAGFYGLGCRRRCGQCKGQQPCTVAEGRCLTCEPGWNGTKCDQPCATGFYGEGCGHRCPPCRDGHACNHVTGKCTRCNAGWIGDRCETKCSNGTYGEDCAFVCADCGSGHCDFQSGRCLCSPGVHGPHCNLTCPPGLHGVDCAQACSCHEDSCDPVTGACRLGEWVGATRRGRGGCRHLADPVTPTETNQRKGVMGAGALLALLLGLLLSLLGCCCACRGKDPARGRGSAPSLRPRPRRELSLGRKKAPQRLCGRFSRISMKLPRIPLRRQKLPKVVGKDDVVAHHDLDNTLNCSFLEPPSGLEQPSPSWSSRASFSSFDTTDEGPVYCVPHEEAATESRDAEAPTAPAPAPAPAPAEALASSPAPVTTPAEEATPLRASSDSERSASSGDGPGGALYARVARREARPARVRGEARGLSLSPSPERRKPPPPDPATKPKVSWIHGKHGAAAARAPSPPPAGPEAAPSPSKRKRTPSDTSARPDEPCSPRARDPTPRPPGLAEEGPALAAPSPPRARARGRGPGLSEPTDAGGPPRSAPEAASMLAAELRDKTRSLGRAEGAVGTQGPREKPAPPQKAKRSVPPASPARAPPAPEAPGPEKAAAGAPGSDTPRKKTPIQKPPRKKSREVAGEPGRVGAPTL*