Part of scaffold_69 (Scaffold)

For more information consult the page for scaffold_69 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CAV1 ENSTTRG00000008528 (Bottlenosed dolphin)

Gene Details

caveolin 1, caveolae protein, 22kDa

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000008073, Bottlenosed dolphin)

Protein Percentage 61.67%
cDNA percentage 69.72%
Ka/Ks Ratio 0.76837 (Ka = 0.3865, Ks = 0.503)

CAV1 ENSBTAG00000017869 (Cow)

Gene Details

Caveolin-1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000023751, Cow)

Protein Percentage 70.12%
cDNA percentage 76.42%
Ka/Ks Ratio 0.65196 (Ka = 0.2703, Ks = 0.4146)

CAV1  (Minke Whale)

Gene Details

caveolin 1, caveolae protein, 22kDa

External Links

Gene match (Identifier: BACU019462, Minke Whale)

Protein Percentage 63.03%
cDNA percentage 70.59%
Ka/Ks Ratio 0.71961 (Ka = 0.3649, Ks = 0.5071)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 495 bp    Location:1450443..1448413   Strand:-
>bmy_02476
ATGGAGTCACCCAAGTCCTCATTCCCTAATCCTGAGATTAGCTGGATTGCTGCTAGCAGTCATCAACTTGTTTGGATTTCAAACTACATTAGATCCCTTCATACAGCTGCCACCACCAAGCAGTTAAGCTGGCTCTGTCCTATTCTTTTGGTGATTGATTTTGAAGATGTGATTGCAGAACCAGAAGGGACACACAGTTTCGATGGCATCTGGAAGGCCAGCTTCACCACCTTCACTGTGACGAAGTACTGGTTTTACCGTTTGCTGTCTGTCCTCTTTGGCATCCCAATGGCACTCATCTGGGGCATTTACTTTGCCATTCTCTCTTTTCTGCACATCTGGGCAGTTGTACCGTGCATTAAGAGTTTCTTGATTGAGATTCAGTGCATCAGCCGTGTCTATTCCATCTACGTCCACGCCTTCTGTGACCCGCTATTTGACTCTATTGGCAAAATATTCAGCAATATCCACATCAACACGCAGAAAGAAATATAA

Related Sequences

bmy_02476T0 Protein

Length: 165 aa      View alignments
>bmy_02476T0
MESPKSSFPNPEISWIAASSHQLVWISNYIRSLHTAATTKQLSWLCPILLVIDFEDVIAEPEGTHSFDGIWKASFTTFTVTKYWFYRLLSVLFGIPMALIWGIYFAILSFLHIWAVVPCIKSFLIEIQCISRVYSIYVHAFCDPLFDSIGKIFSNIHINTQKEI*