Sequence detailsbmy_02476 (Coding sequence)

Part of scaffold_69 (SequenceType object (1))

For more information consult the page for scaffold_69 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CAV1ENSTTRG00000008528 (Bottlenosed dolphin)

Gene Details

caveolin 1, caveolae protein, 22kDa

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000008073, Bottlenosed dolphin)

Protein Percentage 61.67%
cDNA percentage 69.72%
Ka/Ks Ratio 0.76837 (Ka = 0.3865, Ks = 0.503)

CAV1ENSBTAG00000017869 (Cow)

Gene Details

Caveolin-1

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000023751, Cow)

Protein Percentage 70.12%
cDNA percentage 76.42%
Ka/Ks Ratio 0.65196 (Ka = 0.2703, Ks = 0.4146)

CAV1 (Minke Whale)

Gene Details

caveolin 1, caveolae protein, 22kDa

External Links

Gene match (Identifier: BACU019462, Minke Whale)

Protein Percentage 63.03%
cDNA percentage 70.59%
Ka/Ks Ratio 0.71961 (Ka = 0.3649, Ks = 0.5071)

Additional orthologs identified in other species via the OPTIC pipeline.

CAV1 (Human)   Cav1 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 495 bp    Location:1450443..1448413   Strand:-
Raw sequence 
>bmy_02476
ATGGAGTCACCCAAGTCCTCATTCCCTAATCCTGAGATTAGCTGGATTGCTGCTAGCAGTCATCAACTTGTTTGGATTTCAAACTACATTAGATCCCTTCATACAGCTGCCACCACCAAGCAGTTAAGCTGGCTCTGTCCTATTCTTTTGGTGATTGATTTTGAAGATGTGATTGCAGAACCAGAAGGGACACACAGTTTCGATGGCATCTGGAAGGCCAGCTTCACCACCTTCACTGTGACGAAGTACTGGTTTTACCGTTTGCTGTCTGTCCTCTTTGGCATCCCAATGGCACTCATCTGGGGCATTTACTTTGCCATTCTCTCTTTTCTGCACATCTGGGCAGTTGTACCGTGCATTAAGAGTTTCTTGATTGAGATTCAGTGCATCAGCCGTGTCTATTCCATCTACGTCCACGCCTTCTGTGACCCGCTATTTGACTCTATTGGCAAAATATTCAGCAATATCCACATCAACACGCAGAAAGAAATATAA

Related Sequences

bmy_02476T0 SequenceType object (3)

Length: 165 aa      View alignments
>bmy_02476T0
MESPKSSFPNPEISWIAASSHQLVWISNYIRSLHTAATTKQLSWLCPILLVIDFEDVIAEPEGTHSFDGIWKASFTTFTVTKYWFYRLLSVLFGIPMALIWGIYFAILSFLHIWAVVPCIKSFLIEIQCISRVYSIYVHAFCDPLFDSIGKIFSNIHINTQKEI*