Part of scaffold_70 (Scaffold)

For more information consult the page for scaffold_70 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TRPC3 ENSTTRG00000001588 (Bottlenosed dolphin)

Gene Details

transient receptor potential cation channel, subfamily C, member 3

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000001496, Bottlenosed dolphin)

Protein Percentage 99.23%
cDNA percentage 98.76%
Ka/Ks Ratio 0.08186 (Ka = 0.0035, Ks = 0.0422)

TRPC3 ENSBTAG00000019021 (Cow)

Gene Details

short transient receptor potential channel 3

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000025316, Cow)

Protein Percentage 98.84%
cDNA percentage 94.62%
Ka/Ks Ratio 0.02714 (Ka = 0.0064, Ks = 0.2367)

TRPC3  (Minke Whale)

Gene Details

transient receptor potential cation channel, subfamily C, member 3

External Links

Gene match (Identifier: BACU004208, Minke Whale)

Protein Percentage 96.38%
cDNA percentage 96.66%
Ka/Ks Ratio 0.3103 (Ka = 0.0235, Ks = 0.0756)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 2424 bp    Location:311423..252506   Strand:-
>bmy_02486
ATGGAGGAAAGCCCTTCCCTGAGGCGCAAGACGGTGATGCGCGAGAAGGGCCGGCGCCAGGCTGTGCGGGGCCCGGCCTTCATGTTCAACGATCGGGGCACCAGCCTCACCGCCGAGGAGGAGCGCTTCCTCGACGCCGCCGAGTACGGCAACATCCCGGTGGTGCGCAAGATGCTGGAGGAGTCCAGGACGCTGAACGTCAACTGCGTGGACTACATGGGCCAGAACGCGCTGCAGCTGGCGGTGGGCAATGAGCACCTGGAGGTGACTGAGCTGCTGCTCAAGAAGGAGAACCTGGCGCGCATCGGCGACGCCCTGCTGCTCGCCATCAGCAAGGGCTACGTGCGCATCGTGGAGGCCATCCTCAACCACCCGGGGTTCGCGGCCAGCAAGCGCCTCACCCTGAGCCCCTGTGAGCAGGAGCTGCAGGACGACGATTTCTACGCCTACGACGAGGACGGCACGCGCTTCTCCCCCGACATCACCCCCATCATCCTGGCGGCGCACTGCCAGAAGTACGAGGTGGTGCACATGCTGCTGATGAAGGGCGCCAGGATCGAGCGGCCGCACGACTATTTCTGCAAGTGCGGGGACTGCACGGAGAAGCAGAGGCACGACTCCTTCAGCCACTCGCGCTCGAGGATCAATGCCTACAAGGGGCTGGCCAGCCCAGCGTATCTGTCCTTGTCCAGCGAGGACCCCGTGCTCACCGCCCTGGAGCTCAGCAACGAGCTGGCCAAGCTGGCCAACATAGAGAAGGAGTTCAAGAATGACTATCGCAAGCTCTCCATGCAATGCAAAGACTTCGTAGTGGGTGTGCTGGATCTTTGCCGAGATTCGGAAGAGGTAGAAGCCATTCTGAATGGAGATCTGGAATCGGCAGAGCCTCTGGAGATGCACAGGCATAAAGCTTCACTGAGTCGTGTCAAACTTGCCATTAAGTATGAAGTCAAAAAGGATGCACATGCGTTCGGTAGCCGAACTGTCGACAATGGCATGGTAACCTACTTCTCTTTCTCCCTCTCTCTCTGTCCCGACCAACAGTTTGTGGCTCACCCCAATTGCCAGCAGCAGCTCTTGACAATCTGGTACGAGAACCTCTCAGGCCTGCGGGAACAGACGGTAGCTATCAAGTGTCTGGTGGTTCTGGTCGTGGCCTTGGGCCTTCCGTTCCTTGCCATCGGCTACTGGATTGCACCTTGCAGCAGGCTGGGGAAAATTCTGCGAAGCCCTTTTATGAAGTTTGTAGCACACGCTGCTTCTTTCATCATCTTCCTGGGCCTGCTTGTGTTCAATGCCTCAGACAGATTCGAAGGAATCACCACGTTGCCCAATATCACTGTTACTGACTATCCCAGACAGATCTTCAGGGTGAAGACCACCCGGTTCACATGGACTGAGATGCTAATTATGGTCTGGGTTCTTGGAATGATGTGGTCTGAGTGTAAGGAGCTCTGGCTGGAAGGACCCAGGGAATACATTTTGCAGTTGTGGAATGTCCTAGACTTCGGGATGCTCTCCATCTTCATTGCTGCTTTCACAGCCAGATTCCTGGCTTTCCTTCAGGCAACAAAAGCACAACAGTATGTGGACAGTTATGTCCAAGAGAGCGACCTCAGTGAAGTTACACTTCCACCAGAGATACAGTATTTTACTTATGCCAGAGATAAATGGCTCCCTTCAGACCCTCAGATCATATCTGAAGGTCTCTATGCCATAGCTGTCGTGCTCAGCTTTTCTCGGATCGCCTACATCCTCCCTGCGAATGAGAGCTTCGGCCCCTTACAGATCTCTCTTGGAAGGACTGTGAAGGACATATTTAAGTTCATGGTCCTCTTTATTATGGTGTTTCTTGCTTTTATGATTGGCATGTTCATACTTTATTCTTACTACCTTGGGGCTAAAGTAAATGCTGCTTTTACCACTGTAGAAGAAAGTTTCAAGACTTTGTTTTGGTCAATATTTGGGTTGTCTGAAGTGACTTCCGTTGTGCTCAAATATGATCACAAATTCATAGAGAATATTGGATACGTTCTTTATGGAATATACAATGTAACTATGGTGGTGGTTCTACTCAACATGCTCATTGCTATGATTAATAGCTCATATCAAGAGATTGAGTTAAACCTCTTCACTCAGTCTAACTCAAGAGTTTTTGAATCACACAGTTTTAACAGCATTCTCAATCAGCCAACACGTTATCAGCAGATAATGAAAAGACTTATAAAGCGGTATGTTTTGAAAGCACAAGTAGACAAAGAAAATGATGAAGTTAATGAAGGTGAATTAAAAGAAATCAAGCAAGATATCTCCAGCCTTCGCTATGAACTTTTGGAGGACAAGAGCCAAGCGACTGAGGAATTAGCCATTCTAATTCATAAACTCAGTGAGAAACTGAATCCCAGCGTGCTGAGATGTGAATGA

Related Sequences

bmy_02486T0 Protein

Length: 808 aa      View alignments
>bmy_02486T0
MEESPSLRRKTVMREKGRRQAVRGPAFMFNDRGTSLTAEEERFLDAAEYGNIPVVRKMLEESRTLNVNCVDYMGQNALQLAVGNEHLEVTELLLKKENLARIGDALLLAISKGYVRIVEAILNHPGFAASKRLTLSPCEQELQDDDFYAYDEDGTRFSPDITPIILAAHCQKYEVVHMLLMKGARIERPHDYFCKCGDCTEKQRHDSFSHSRSRINAYKGLASPAYLSLSSEDPVLTALELSNELAKLANIEKEFKNDYRKLSMQCKDFVVGVLDLCRDSEEVEAILNGDLESAEPLEMHRHKASLSRVKLAIKYEVKKDAHAFGSRTVDNGMVTYFSFSLSLCPDQQFVAHPNCQQQLLTIWYENLSGLREQTVAIKCLVVLVVALGLPFLAIGYWIAPCSRLGKILRSPFMKFVAHAASFIIFLGLLVFNASDRFEGITTLPNITVTDYPRQIFRVKTTRFTWTEMLIMVWVLGMMWSECKELWLEGPREYILQLWNVLDFGMLSIFIAAFTARFLAFLQATKAQQYVDSYVQESDLSEVTLPPEIQYFTYARDKWLPSDPQIISEGLYAIAVVLSFSRIAYILPANESFGPLQISLGRTVKDIFKFMVLFIMVFLAFMIGMFILYSYYLGAKVNAAFTTVEESFKTLFWSIFGLSEVTSVVLKYDHKFIENIGYVLYGIYNVTMVVVLLNMLIAMINSSYQEIELNLFTQSNSRVFESHSFNSILNQPTRYQQIMKRLIKRYVLKAQVDKENDEVNEGELKEIKQDISSLRYELLEDKSQATEELAILIHKLSEKLNPSVLRCE*