Part of scaffold_70 (Scaffold)

For more information consult the page for scaffold_70 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

BBS12 ENSBTAG00000007564 (Cow)

Gene Details

Bardet-Biedl syndrome 12 protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000009953, Cow)

Protein Percentage 83.47%
cDNA percentage 88.65%
Ka/Ks Ratio 0.43273 (Ka = 0.095, Ks = 0.2194)

BBS12  (Minke Whale)

Gene Details

Bardet-Biedl syndrome 12

External Links

Gene match (Identifier: BACU004201, Minke Whale)

Protein Percentage 97.6%
cDNA percentage 98.7%
Ka/Ks Ratio 0.60122 (Ka = 0.0113, Ks = 0.0189)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 2154 bp    Location:1034788..1046935   Strand:+
>bmy_02493
ATGATGATTCATGTGATGGCTTGCAGGGTCATAAACAAAAGAAGGCACATGGGACTTCAACAGCTTTCATCGTTTGCAGAAACAGGAAGAACTTTCCTAGGCCCAGTAAAATCATCCAAATTTATTATAGATGAAGAGTGTCATGAAACTGTGTTAATCAGTTCAACAGTAAGGCTTCTTGAAAGTTTGGATTTAACCAGTGCAGTGGGACAACTTCTCAATGAAGCAGTTCAAGCACAAAATAACACATACAGAACTGGAACCAGTACTCTTTTGTTTCTTGTTGGTGCATGGAGCAGTGCTGCTGAAGAATGTCTTCATTTGGGTGTCCCCATTTCATTAATAGTGTCTGTAATGTCAGAAGGCTTGAATTCATGCATTGAAGAGGTAGTTTCCCTTCAAGTACCTATCCGCAATGTATTTGACCATATGGTTAACACAAAGACATTTTCTGGACCTGAAACATTTAGTGTCAGCGTATACCCTTTTCTCCAAATCCCTTCAGGTACTGGTTTGATACAGAAAGAGCGTGATCTCAAAGATGTTGCCTCTCAGTCATTGGCCATTTACAGTCTTTCTGGGAGACCTGTTAAATCACCTCAACTCTTTAGGTCTCAGGCTAAGGTTGAAGCAGATGGAAACACATCACAAACTCCTCAAACTCTGAAAAACAGTCCACTTGCAGACACCCGCTGCAGAAAGTCAGTACTAACCCACAGTAGACATTTTAGTAGGACAGGTAATAATCAATGGATAAGCAAACCAGATGGAGTTCCAGAACAACTTAGTGCAGCTACTCCCAAGACTTATAGATGTGATGATTTGGTGGAATTGGAGGTGGGTTTGAGTCACGGAGGTCACAGCAGCATGAAGTTAGTAGATGAAGCAGTACGGCTACAATATCAGAACGCAGGTATGCAACAAGGCAGCTGTACAATGCCATTTCTTTTTGACATTTCAAGAATCTTCACTTGCTGCTTACCGGGTTTACCTGAAACTTTTTCTTGTGTCTGTCCAGGATATATCACTGTTGTATCAATACCTAGTACTACTCTGATCAAGGAATTGCAGAATCAGCCTATCCGGGTAGTTCTTGTTGAAGGTGATCTCACAGAGAATTATCGCCACCTGGGATTTAATAAGTCTGCAAGTATTAAAACAGTATCAGAAAGCGTGAAGCTTCAACAAGATGGCTCAGAAGAACTGTGGACAGATCATGTGTTACAGGTATTAATCAAGTTCAATGTGAACCTTGTCCTGGCACAAGGAAATGTGTCTGAACGCTTAATTGAAAAATGCACAGACAACAAGAGGTTGGTAATTGGATCAGTGAATGGCAATGTAATGCAGGCTTTTGCAGAGGCTTCAGGAGCAGTGCAGGTGGCCTACATTACACAAATAAATGAAAACTGTGTGGGCAATGGTGTCTGTGTGACCATCTGGAGAAGCATTCCCTTCGATGCTGTAGATCAGATCAACAGAATGGCAATCGTGTTAAACACAGAAGGAATTAATTTGGTGACAGTAGTGCTGACTAGTCCAGTCACTGCCCAGATGCAAACCAAAGAAGATACCTTCTGGACTTGTGCCTATCGTCTGTATCATGCTCTAAAAGAGCAAAAGGTCTTCCTTGGAGGTGGCGCAGTTGAATTGTTGTGTCTTAGCCATCTTCAGATTCTTGCGGAGCAGTCTGTGAATAAAGGAAACCAAGGCTGTTCAGGATGGCTTCATAATACTTCCTCTTGGCTGGCCTCATCTGTGACACAGTACAGACCAACCGTGCTTAAATGCCTGGCAAATGGATGGCACAGATACCTTTCAACTCTCCTGTATAACACTGCCAGTTACTCATCAGAATTTGAAGCCGGCACATTCATTCAGCATCATCTACAAAATGCTGCAGACTCTGGCTCTCCTTCATCTTACGTCTTGAATGAATATAGTAAACTAAATAGTGGGATTTTAAATTCAGACATTTCAGATAAACTGGAACAGATTCCAAGAGTTTATGACATTGTTACACCAAAGATTGAGGCATGGCGCCGAGCTTTGGATTTAGTACTGTTAGTTCTTCAGACGGACAGTGAAATTATCACTGGACTTGGACACACGCAGATAAATTCGCAGGAATCAGAGGGCATTTTATTTTTGTAG

Related Sequences

bmy_02493T0 Protein

Length: 718 aa      View alignments
>bmy_02493T0
MMIHVMACRVINKRRHMGLQQLSSFAETGRTFLGPVKSSKFIIDEECHETVLISSTVRLLESLDLTSAVGQLLNEAVQAQNNTYRTGTSTLLFLVGAWSSAAEECLHLGVPISLIVSVMSEGLNSCIEEVVSLQVPIRNVFDHMVNTKTFSGPETFSVSVYPFLQIPSGTGLIQKERDLKDVASQSLAIYSLSGRPVKSPQLFRSQAKVEADGNTSQTPQTLKNSPLADTRCRKSVLTHSRHFSRTGNNQWISKPDGVPEQLSAATPKTYRCDDLVELEVGLSHGGHSSMKLVDEAVRLQYQNAGMQQGSCTMPFLFDISRIFTCCLPGLPETFSCVCPGYITVVSIPSTTLIKELQNQPIRVVLVEGDLTENYRHLGFNKSASIKTVSESVKLQQDGSEELWTDHVLQVLIKFNVNLVLAQGNVSERLIEKCTDNKRLVIGSVNGNVMQAFAEASGAVQVAYITQINENCVGNGVCVTIWRSIPFDAVDQINRMAIVLNTEGINLVTVVLTSPVTAQMQTKEDTFWTCAYRLYHALKEQKVFLGGGAVELLCLSHLQILAEQSVNKGNQGCSGWLHNTSSWLASSVTQYRPTVLKCLANGWHRYLSTLLYNTASYSSEFEAGTFIQHHLQNAADSGSPSSYVLNEYSKLNSGILNSDISDKLEQIPRVYDIVTPKIEAWRRALDLVLLVLQTDSEIITGLGHTQINSQESEGILFL*