Part of scaffold_71 (Scaffold)

For more information consult the page for scaffold_71 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SEMA3D ENSTTRG00000009531 (Bottlenosed dolphin)

Gene Details

sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3D

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000009034, Bottlenosed dolphin)

Protein Percentage 81.52%
cDNA percentage 82.78%
Ka/Ks Ratio 0.78014 (Ka = 0.0491, Ks = 0.063)

SEMA3D ENSBTAG00000024394 (Cow)

Gene Details

semaphorin-3D

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000053670, Cow)

Protein Percentage 90.36%
cDNA percentage 90.69%
Ka/Ks Ratio 0.28619 (Ka = 0.064, Ks = 0.2238)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1188 bp    Location:730400..772971   Strand:+
>bmy_02508
ATGGTCCATATGCGCATAAGGAAAGTGCAGATCATCGTTGGGTGCAGTATGATGGAAGAATTCCTTATCCCCGACCTGGTACAGTATTGTCCAAGCAAAACCTATGACCCACTGATTAAATCCACCCGAGATTTTCCGGACGATGTCATCAGTTTCATAAAGCGGCACCCTGTGATGTATAAATCAGTATATCCAGTTGTGGGAGGACCAACATTCAAGCGCATCAATGTGGATTACAGACTGACACAGATTGTGGTGGATCACGTTGTCGCAGAAGATGGCCAGTACGATGTGATGTTTCTTGGAACAGACATTGGAACAGTCCTAAAAGTTGTCAGCATTTCAAAGGAGAAGTGGAAAATGGAAGAGGTAGTACTGGAGGAGTTACATATATTCAAGCAACAGTTGTACATTGGTTCCCGAGATGGACTGGCTCAGCTCTCCTTGCACAGATGTGACACTTATGGGAAAGCTTGTGCAGACTGTTGTCTTGCCAGAGACCCCTACTGTGCCTGGGATGGAAATGCATGCTCTCGCTATGCACCCACTTCAAAAAGGCGAGCTAGACGCCAAGATGTGAAGTATGGGGACCCAATCACCCAGTGCTGGGACATAGAAGACAGCATTAGTCATGAAGCTGCTGATGAAAAGGTGATTTTTGGCATTGAATTTAATTCAACCTTTCTGGAATGTATACCTAAATCCCAACAAGCATCTATTAAGTGGTATATCCAGCGGTCAGGAGATGAATATCGAGAGGAGTTGAAACCCGATGAAAGGATCATCAAAACAGAATAYGGGCTACTGATTCGAAGTCTGCAGAAGAAGGACTCTGGGATGTATTACTGCAAAGCACAGGAGCACACTTTTATCCACACCATAGTGAAGCTGACTTTGAATGTCATTGAGAATGAACAGATGGAAAATACCCAGAGGGCAGAGCACGAAGAGGGGCGGGTCAAGGATCTGTTGGCTGAGTCACGGTTGAGATACAAAGACTATATCCAAATCCTTAGCAGCCCAAACTTCAGCCTCGACCAGTACTGCGAACAGATGTGGCACAGGGAGAAGCGGAGACAGCGAAACAAGGGCGGCCCAAAGTGGAAGCACATGCAGGAAATGAAGAAGAAACGAAATCGAAGACATCACAGAGACCTAGAAGAGCTTCCTAGAGCTGTGGCTACATAG

Related Sequences

bmy_02508T0 Protein

Length: 396 aa      View alignments
>bmy_02508T0
MVHMRIRKVQIIVGCSMMEEFLIPDLVQYCPSKTYDPLIKSTRDFPDDVISFIKRHPVMYKSVYPVVGGPTFKRINVDYRLTQIVVDHVVAEDGQYDVMFLGTDIGTVLKVVSISKEKWKMEEVVLEELHIFKQQLYIGSRDGLAQLSLHRCDTYGKACADCCLARDPYCAWDGNACSRYAPTSKRRARRQDVKYGDPITQCWDIEDSISHEAADEKVIFGIEFNSTFLECIPKSQQASIKWYIQRSGDEYREELKPDERIIKTEYGLLIRSLQKKDSGMYYCKAQEHTFIHTIVKLTLNVIENEQMENTQRAEHEEGRVKDLLAESRLRYKDYIQILSSPNFSLDQYCEQMWHREKRRQRNKGGPKWKHMQEMKKKRNRRHHRDLEELPRAVAT*