Sequence detailsbmy_02508 (Coding sequence)

Part of scaffold_71 (SequenceType object (1))

For more information consult the page for scaffold_71 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SEMA3DENSTTRG00000009531 (Bottlenosed dolphin)

Gene Details

sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3D

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000009034, Bottlenosed dolphin)

Protein Percentage 81.52%
cDNA percentage 82.78%
Ka/Ks Ratio 0.78014 (Ka = 0.0491, Ks = 0.063)

SEMA3DENSBTAG00000024394 (Cow)

Gene Details

semaphorin-3D

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000053670, Cow)

Protein Percentage 90.36%
cDNA percentage 90.69%
Ka/Ks Ratio 0.28619 (Ka = 0.064, Ks = 0.2238)

Additional orthologs identified in other species via the OPTIC pipeline.

SEMA3D (Human)   Sema3d (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 1188 bp    Location:730400..772971   Strand:+
Raw sequence 
>bmy_02508
ATGGTCCATATGCGCATAAGGAAAGTGCAGATCATCGTTGGGTGCAGTATGATGGAAGAATTCCTTATCCCCGACCTGGTACAGTATTGTCCAAGCAAAACCTATGACCCACTGATTAAATCCACCCGAGATTTTCCGGACGATGTCATCAGTTTCATAAAGCGGCACCCTGTGATGTATAAATCAGTATATCCAGTTGTGGGAGGACCAACATTCAAGCGCATCAATGTGGATTACAGACTGACACAGATTGTGGTGGATCACGTTGTCGCAGAAGATGGCCAGTACGATGTGATGTTTCTTGGAACAGACATTGGAACAGTCCTAAAAGTTGTCAGCATTTCAAAGGAGAAGTGGAAAATGGAAGAGGTAGTACTGGAGGAGTTACATATATTCAAGCAACAGTTGTACATTGGTTCCCGAGATGGACTGGCTCAGCTCTCCTTGCACAGATGTGACACTTATGGGAAAGCTTGTGCAGACTGTTGTCTTGCCAGAGACCCCTACTGTGCCTGGGATGGAAATGCATGCTCTCGCTATGCACCCACTTCAAAAAGGCGAGCTAGACGCCAAGATGTGAAGTATGGGGACCCAATCACCCAGTGCTGGGACATAGAAGACAGCATTAGTCATGAAGCTGCTGATGAAAAGGTGATTTTTGGCATTGAATTTAATTCAACCTTTCTGGAATGTATACCTAAATCCCAACAAGCATCTATTAAGTGGTATATCCAGCGGTCAGGAGATGAATATCGAGAGGAGTTGAAACCCGATGAAAGGATCATCAAAACAGAATAYGGGCTACTGATTCGAAGTCTGCAGAAGAAGGACTCTGGGATGTATTACTGCAAAGCACAGGAGCACACTTTTATCCACACCATAGTGAAGCTGACTTTGAATGTCATTGAGAATGAACAGATGGAAAATACCCAGAGGGCAGAGCACGAAGAGGGGCGGGTCAAGGATCTGTTGGCTGAGTCACGGTTGAGATACAAAGACTATATCCAAATCCTTAGCAGCCCAAACTTCAGCCTCGACCAGTACTGCGAACAGATGTGGCACAGGGAGAAGCGGAGACAGCGAAACAAGGGCGGCCCAAAGTGGAAGCACATGCAGGAAATGAAGAAGAAACGAAATCGAAGACATCACAGAGACCTAGAAGAGCTTCCTAGAGCTGTGGCTACATAG

Related Sequences

bmy_02508T0 SequenceType object (3)

Length: 396 aa      View alignments
>bmy_02508T0
MVHMRIRKVQIIVGCSMMEEFLIPDLVQYCPSKTYDPLIKSTRDFPDDVISFIKRHPVMYKSVYPVVGGPTFKRINVDYRLTQIVVDHVVAEDGQYDVMFLGTDIGTVLKVVSISKEKWKMEEVVLEELHIFKQQLYIGSRDGLAQLSLHRCDTYGKACADCCLARDPYCAWDGNACSRYAPTSKRRARRQDVKYGDPITQCWDIEDSISHEAADEKVIFGIEFNSTFLECIPKSQQASIKWYIQRSGDEYREELKPDERIIKTEYGLLIRSLQKKDSGMYYCKAQEHTFIHTIVKLTLNVIENEQMENTQRAEHEEGRVKDLLAESRLRYKDYIQILSSPNFSLDQYCEQMWHREKRRQRNKGGPKWKHMQEMKKKRNRRHHRDLEELPRAVAT*