Sequence details bmy_02511 (Coding sequence)

Part of scaffold_71 (Scaffold)

For more information consult the page for scaffold_71 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SEMA3E ENSTTRG00000005209 (Bottlenosed dolphin)

Gene Details

sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3E

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000004910, Bottlenosed dolphin)

Protein Percentage 75.6%
cDNA percentage 75.92%
Ka/Ks Ratio 0.26424 (Ka = 0.0257, Ks = 0.0972)

SEMA3E ENSBTAG00000014920 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000019866, Cow)

Protein Percentage 95.9%
cDNA percentage 94.21%
Ka/Ks Ratio 0.1116 (Ka = 0.0206, Ks = 0.1844)

SEMA3E  (Minke Whale)

Gene Details

sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3E

External Links

Gene match (Identifier: BACU018989, Minke Whale)

Protein Percentage 90.48%
cDNA percentage 93.04%
Ka/Ks Ratio 0.79877 (Ka = 0.0698, Ks = 0.0873)

Additional orthologs identified in other species via the OPTIC pipeline.

SEMA3E (Human)   Sema3e (Mouse)  

Genome Location

Sequence Coding sequence

Length: 2607 bp    Location:2031924..2195631   Strand:+
Raw sequence 
>bmy_02511
ATGAAGGGCTTATCGGTAGGATTTCTGGTAGCGCATACGGGCGCCCGGGCCTCCGAACTTTTTGAATTAGCTGCGACAGGGATCAGCCACCAGCAGAGTTCGGTCTTACTGAATGAGGATGTCTTTGATCTTCTTGGAAGCCTCATCCACGAATTCCTGGTACTAGGCCACCAGGGCTTTGGAGATGGACTGGCTGATTGGGTAAATCTGGGTCACGAGACCACTACCGTTTACGCCGACACGCACGACCACGCACGACCACGCCCCCGAATCGCTCTTTCAGAAGCAGAAGCGGTTCGGGTCGTTGCCTTGCGGCTGCCTGTTTCACCTCGAAAGTCAGAACCTGCACCTGGCAGAGACTGGTTTCCAAGGCACTACAGGAAAGACTGTGATGTGAAAAGAAAATGTTCCTTGGCAAGGACACTACAGCTCTTGGATCTAAACAGAACGTCAGTCTTTCATAGCCCTTTTGGATTTCTTGATCTCCAGACAATGCTGCTGGATGAATATCAAGAGAGACTCTTCGTGGGAGGCAAGGATCTTGTGTATTCCCTCAGCTTAGAACACATCAGCAGTGACTATAGAGAGATACACTGGCCAAGTACAGCAGTAAAAACAGAAGAATGCATAATGAAAGGAAAAGATGCCAGTGAGTGTGCAAATTATGTTCGGGTTTTGCATCACTATAATAGGACGCACCTTCTGACCTGCGGTACTGGAGCTTTTGACCCACTTTGTGCCTTCATCAGAGTTGGATACCATTTAGAGCGTTTGGGTAGTGAATTGTTTGCTGGACTCTACAGTGACTACTGGGGCAGAGACGCTGCCATTTTCAGGAGCCTGGGGCGACTGGCTCATATCCGCACTGAGCACGATGACGAGCGCCTGTTGAAAGAGCCAAAATTTGTAGGTTCGTACATGATCCCTGACAATGAAGACCGAGATGACAACAAAGTGTATTTCTTTTTTACGGAGAAGGCCCTGGAGGCAGAAAACAATGCCCAGGCAATTTACACCAGAGTGGGGCGACTCTGCGTGAACGATGTAGGAGGACAGAGAATACTAGTGAACAAGTGGAGCACTTTCCTGAAAGCTAGACTGGTTTGCTCAGTACCAGGAATGAATGGAATTGATACATATTTTGATGAATTAGAGGATGTTTTTTTGCTGCATACCAGAGATCATAAGAACCCAGTGATATTTGGACTCTTCAACACTACCAGTAATATATTTAGAGGGCATGCTATATGTGTCTATCACATGTCCAGTATCCGGGCAGCCTTTAATGGACCATATGCACATAAGGAAGGACCTGAATACCACTGGTCACTCTATGAAGGAAAAGTCCCTTATCCAAGACCTGGTTCTTGTGCCAGCAAAGTGAATGGAGGGAGGTACGGAACCACCAAAGACTACCCYGATGATGCCATCAGATTTGCAAGAAGCCATCCACTTCTGTACCAGCCCATAAAACCTGCCCATAAAAAACCAATACTGGTGAAAACAGATGGAAAGTATAACCTGAAGCAAATAGCAGTGGATCGAGTGGAAGCCGAGGATGGCCAATATGATGTTTTGTTCATTGGGACAGATAATGGAATCGTGCTGAAAGTAATCACGATTTATAACCAAGAAACAGAATCAATGGAAGAAGTAATTCTAGAAGAACTTCAGATATTCAAGGATCCAGTTCCTATTATTTCTATGGAGATTTCATCAAAGAGACAACAGCTCTATATTGGATCTGCTTCTGCCGTGGCCCAAGTCAGATTCCATCAGTGTGACATGTATGGAAGTGCTTGTGCAGACTGCTGCCTGGCTCGAGACCCTTACTGCGCCTGGGATGGCATATCCTGCTCCCGGTATTACCCAACAGGCACACATGCAAAACGGCGATTCCGCAGACAAGATGTTCGGCATGGAAATGCAGCTCAGCAGTGCTTTGGACAGCAGTTTGTCGGGGATGTTTTGGATAAGACTGAGGAGCGATTGGCCTATGGCATAGAGAACAACAGTACTTTGCTGGAATGTACCCCGCGATCTTTACAAGCAAAAGTTATCTGGTTTGTGCAGAAAGGACACGACACAAGAAAAGAGGAGGTAATTCATAGCTGCACATTCACACCGTGGTGTCTTGCATACAGTGTGCCATCAGTGAAGACAGATGACAGAATGGTTAAGATGGACCTCGGTTTACTCTTCCTAAGGGTACGCAAAGTGGATGCCGGGACCTATTTTTGCCAGACAGTAGAACATAGTTTTGTCCATACAATCCGTAAAATCACCCTGGAGGTTGTGGAAGAGGAGAGAGTGGAGGAAATGTTTAACAAAGACTACGAAGAGGACGGGCCTCACAAGATGCCTTGTCCTGCTCAGAGCAGCACCCCATATGGAACAAAACCCTGGTACAAGGAATTCTTGCAGCTGATTGGTTATAGCAACTTCCAGAGAGTAGAAGAATACTGTGAAAAGGTATGGTGCACAGATAAAAAGAGAAGAAAGCTTAAAATGTCCCCTTCCAAGTGGAAGTATGCCAACCCCCAGGAAAAGAAGCTCCGTCCCAAAGCCGAGCACTATCGCCTGCCTAGGCATGTGCTGGACTCCTGA

Related Sequences

bmy_02511T0 Protein

Length: 869 aa      View alignments
>bmy_02511T0
MKGLSVGFLVAHTGARASELFELAATGISHQQSSVLLNEDVFDLLGSLIHEFLVLGHQGFGDGLADWVNLGHETTTVYADTHDHARPRPRIALSEAEAVRVVALRLPVSPRKSEPAPGRDWFPRHYRKDCDVKRKCSLARTLQLLDLNRTSVFHSPFGFLDLQTMLLDEYQERLFVGGKDLVYSLSLEHISSDYREIHWPSTAVKTEECIMKGKDASECANYVRVLHHYNRTHLLTCGTGAFDPLCAFIRVGYHLERLGSELFAGLYSDYWGRDAAIFRSLGRLAHIRTEHDDERLLKEPKFVGSYMIPDNEDRDDNKVYFFFTEKALEAENNAQAIYTRVGRLCVNDVGGQRILVNKWSTFLKARLVCSVPGMNGIDTYFDELEDVFLLHTRDHKNPVIFGLFNTTSNIFRGHAICVYHMSSIRAAFNGPYAHKEGPEYHWSLYEGKVPYPRPGSCASKVNGGRYGTTKDYPDDAIRFARSHPLLYQPIKPAHKKPILVKTDGKYNLKQIAVDRVEAEDGQYDVLFIGTDNGIVLKVITIYNQETESMEEVILEELQIFKDPVPIISMEISSKRQQLYIGSASAVAQVRFHQCDMYGSACADCCLARDPYCAWDGISCSRYYPTGTHAKRRFRRQDVRHGNAAQQCFGQQFVGDVLDKTEERLAYGIENNSTLLECTPRSLQAKVIWFVQKGHDTRKEEVIHSCTFTPWCLAYSVPSVKTDDRMVKMDLGLLFLRVRKVDAGTYFCQTVEHSFVHTIRKITLEVVEEERVEEMFNKDYEEDGPHKMPCPAQSSTPYGTKPWYKEFLQLIGYSNFQRVEEYCEKVWCTDKKRRKLKMSPSKWKYANPQEKKLRPKAEHYRLPRHVLDS*