Sequence details bmy_02520 (Coding sequence)

Part of scaffold_72 (Scaffold)

For more information consult the page for scaffold_72 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TSHZ1 ENSTTRG00000017219 (Bottlenosed dolphin)

Gene Details

teashirt zinc finger homeobox 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000016319, Bottlenosed dolphin)

Protein Percentage 95.54%
cDNA percentage 97.16%
Ka/Ks Ratio 0.13936 (Ka = 0.0176, Ks = 0.1266)

TSHZ1 ENSBTAG00000000422 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000054438, Cow)

Protein Percentage 91.21%
cDNA percentage 90.25%
Ka/Ks Ratio 0.05878 (Ka = 0.0404, Ks = 0.6869)

Additional orthologs identified in other species via the OPTIC pipeline.

TSHZ1 (Human)   Tshz1 (Mouse)  

Genome Location

Sequence Coding sequence

Length: 3561 bp    Location:1543205..1503534   Strand:-
Raw sequence 
>bmy_02520
ATGGATGCGCGTGCAGGGCTGTCTCACTGCACGGCCTGCGAGAGCGTGACCGATGTGTGGTGGCTGTTCATAGTTCATGCTGAGTCTTTAAAGACCAGAACTCAGACTGATAACGGTGTTGCAGGTCTAGTCACAGCAGACAAGGTGGTTCCTATTCGCCGTCAGCTGCGAGGGCCTTCAGAACTTCGGAGGAATTGCCGTGTTGTCGACAACTGCAGGGGTGTGCCCTGCACTGTTCCCATCCACACCCCAATCCCCAAAGACTTGATGTTTCCTTCTCTCTTCTTTTATCCTGCACATTTACGAGAATGGGCTGCTGGATTTGAACTTGGAGACATGTGTCTGAGACCTTACGTTCCTGAGGAAGAACTGAAGGCAGCAGAAATAGATGAAGAAAACGTGGAGGAGGATGGGCTGCCTTTGGACGTTCAGGAAAGCGACTTCGTGTGCAATGAGGAAGCGGAGCTCAAGGAGGCCCAGAGCTACCAGAACTCCCCCATCAGCACCGCGACTAATCAGGACGCCGGCTACGGGTCGCCGTTCAGCGAAAACAGCGACCCGCCAGCCCATTTCAAGAGCTCTTCCTCCAAGGAAGAGAAAGAGGAGCCCCAGGGTCGGGAGGGCGTCTCCTACCCCCAGGACAGCTTGGCCCAGATCAAGGCCGTGTATGCAAACCTGTTCTCGGAGTCCTGCTGGTCCAGCTTGGCTCTGGATTTGAAGAAGTCCGGTTCGACCACCAGCAACAGCGATGCCGGCCAGAAGGAGGGCTCCCCCCCCGCCCCCATGCCCCCCACCAGTACCGCGGGGGCCACCGGGACCACGGCGAGCACCCCCAGCTCGGGCTCCAGCTCCAGCACCAGCACCAGCACCAGCGCCAGCGGCGGCCCCGGCTATGACTGGCACCAGGCCGCCCTGGCCAAGACGCTGCAGCAGACGTCCTCGTACGGGCTGCTGCCCGAGCCCAGCCTCTTCAGCACCGTGCAGCTCTACCGGCAGAGCAACAAGCTGTACGGCTCCGTGTTCACGGGCGCCAGCAAGTTCCGCTGCAAAGACTGCAGCGCCGCGTACGACACGCTGGTGGAGCTGACGGTGCACATGAACGAGACGGGGCACTACCGCGACGACAACAGAGACAAGGACGCCGAGAAGACCAAGCGGTGGTCCAAGCCCAGGAAGCGCTCCCTGATGGAGATGGAGGGGAAGGAGGACGCCCAGAAGGTGCTCAAGTGCATGTACTGCGGCCACTCCTTTGAGTCTCTGCAGGACCTGAGCGTGCACATGATCAAGACAAAGCATTACCAGAAAGTGCCTCTCAAGGAGCCGGTGCCGGCCATCACCAAGCTGGTCCCTTCCACCAAAAAGCGGGCGCTGCAGGACTTGGCGTCCCCCTGCTCCCCCGAACCGGCGGGCATCGCGGCCGAAGTGGCGCTGGGCGAGTCGGCCAAGGACCAGAAGTCGGCCAACCCGTACGTGACGCCCAACAACCGCTACGGCTACCAGAACGGGGCCAGCTACACCTGGCAGTTCGAGGCCCGCAAGGCCCAGATCCTCAAGTGCATGGAATGCGGCAGCTCCCACGACACCCTGCAGCAGCTCACCGCCCACATGATGGTCACCGGCCACTTCTTGAAAGTGACCACCTCTGCCTCCAAGAAAGGGAAGCAGCTGGTGCTGGACCCCATGGTGGAGGAGAAGATCCAGTCCATTCCTCTGCCCCCCACCACGCACACGCGGCTGCCCGCCGCCCACGTCAAAAAGCAGCCCGACTCTCCCTCGGGGTCCGCGGCCCCGGAGGAAAAGAAGGAGCCCGAGAAGGAGAAGGCGCCGCCGGCGGTGGCCGGGGACGCAGACAAGCAGATCAAGGAGGAGGGCGAGGACGCCTCCGACAAGCTCGAGCCCACCACCCTCTACCAGTACCTCCGCGAGGAGGACCTGGACGACAGCCCCAGGGGCGGGGTGGACATCCTGAAGTCCCTGGAGAACACGGTCTCCACGGCCATCAGCAAAGCCCAGAACGGCGCGCCCTCGTGGGGCGGCTACCCCAGCATCCACGCCGCCTACCAGCTGCCGGGCGCCGTGAAGCCGCTGCCGCCCGTGCAGAGCGTGCAGATGCAGCCGTCCTACGCCAGCAGCGTGAAGGCGCTGTCCTCGGAGCACAGCGCGCTCCTGCACTCCCCGGGGAGCCTCACGCCGCCGCCCCACAAGAGCAACGTGTCGGCCATGGAGGAGCTGGTGGAGAAGGTCACGGGCAAGGTCAGCGTGAAGAAGGAGGAGAGGCCGGCGGAGAAGGACAAGGGCTCGCCGGCCAAGGCCGCGTCCCCCGCGGCCAAGGAGAATAAAGACTTCCCCAGGGCCGAGGACCTCGGCGGCGGCGGCGGCGGCGGCGGCAAGCCCCAGCAGAAGAAGGGCCCCGAAGCCGATGCGGGGAAGACCAAGAAGGAGGGTGCGGTGGACGCCCACACCCCGAACGGCACGGAGCCCCTCAAGGCCAAAGTCACCAACGGCTGTAACAACCTGGGCATCATCACGGACCACTCGCCCGAGCCCTCCTTCATCAACCCGCTGAGCGCCCTGCAGTCCATCATGAACACCCACCTGGGCAAAGTGTCCAGGCCCGTGAGCCCCTCGCTGGACCCGCTGGCCATGCTCTACAAGATCAGCACCAGCATGCTGGACAAGCCGGCCTTCCCCGCCCCGCCCGCCAAGCCGCCCGGCGCCGTGGACCGCTACTACTACGAGGGCAGCGACCAGCCCATCGACCTGACCAAGTCCAAGAGCAAGCCCCTGGTCCCGGGCGCCGCCGACGGTGTGTCCTCGCCGCTCCGGGAGAGCGCGCTCATGGACATCTCGGACATGGTGAAGAACCTCACGGGCCGGCTGACCCCCAAGTCCTCCACGCCCTCCACCGTGTCGGAGAAGTCGGACGCCGACGGCAGCAGCTTCGAGGAGGCGGTGGACGAACTGTCTCCCGTTCACAAGAGGAAGGGGCGGCAATCCAACTGGAACCCGCAGCACCTGCTTATCCTGCAGGCCCAGTTCGCCTCGAGCCTGCGGGAGACCCCGGAGGGTAAGTACATCATGTCGGACCTGGGCCCTCAGGAGCGGGTGCACATCTCCAAGTTCACCGGGCTCTCCATGACCACCATCAGCCACTGGCTGGCCAACGTCAAGTACCAGTTGCGGAGGACAGGGGGGACCAAGTTCCTGAAGAACCTGGACACAGGGCATCCTGTTTTCTTTTGCAACGATTGTGCCTCTCAGTTCAGAACTGCTTCCACGTACATCAATCATCTAGAGACACACTTAGGCTTCAGCTTGAAGGATCTCTCCAAGCTGCCACTAAATCAGATTCAAGAACAGCAGAACGTTTCCAAAGTCCTGGCGAACAAAGCGTTGGGCCCGGTGGGAGCCGCCGAGGACGATCTGGGCTCCCCATTCCAGTGCAAGCTCTGCAACCGGACTTTCGCGAGCAAGCACGCAGTCAAGCTGCACCTTAGTAAGACCCACGGCAAGTCCCCCGAGGACCACCTGATCTACGTGACGGAGCTGGAGAAACAGTAG

Related Sequences

bmy_02520T0 Protein

Length: 1187 aa      View alignments
>bmy_02520T0
MDARAGLSHCTACESVTDVWWLFIVHAESLKTRTQTDNGVAGLVTADKVVPIRRQLRGPSELRRNCRVVDNCRGVPCTVPIHTPIPKDLMFPSLFFYPAHLREWAAGFELGDMCLRPYVPEEELKAAEIDEENVEEDGLPLDVQESDFVCNEEAELKEAQSYQNSPISTATNQDAGYGSPFSENSDPPAHFKSSSSKEEKEEPQGREGVSYPQDSLAQIKAVYANLFSESCWSSLALDLKKSGSTTSNSDAGQKEGSPPAPMPPTSTAGATGTTASTPSSGSSSSTSTSTSASGGPGYDWHQAALAKTLQQTSSYGLLPEPSLFSTVQLYRQSNKLYGSVFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNRDKDAEKTKRWSKPRKRSLMEMEGKEDAQKVLKCMYCGHSFESLQDLSVHMIKTKHYQKVPLKEPVPAITKLVPSTKKRALQDLASPCSPEPAGIAAEVALGESAKDQKSANPYVTPNNRYGYQNGASYTWQFEARKAQILKCMECGSSHDTLQQLTAHMMVTGHFLKVTTSASKKGKQLVLDPMVEEKIQSIPLPPTTHTRLPAAHVKKQPDSPSGSAAPEEKKEPEKEKAPPAVAGDADKQIKEEGEDASDKLEPTTLYQYLREEDLDDSPRGGVDILKSLENTVSTAISKAQNGAPSWGGYPSIHAAYQLPGAVKPLPPVQSVQMQPSYASSVKALSSEHSALLHSPGSLTPPPHKSNVSAMEELVEKVTGKVSVKKEERPAEKDKGSPAKAASPAAKENKDFPRAEDLGGGGGGGGKPQQKKGPEADAGKTKKEGAVDAHTPNGTEPLKAKVTNGCNNLGIITDHSPEPSFINPLSALQSIMNTHLGKVSRPVSPSLDPLAMLYKISTSMLDKPAFPAPPAKPPGAVDRYYYEGSDQPIDLTKSKSKPLVPGAADGVSSPLRESALMDISDMVKNLTGRLTPKSSTPSTVSEKSDADGSSFEEAVDELSPVHKRKGRQSNWNPQHLLILQAQFASSLRETPEGKYIMSDLGPQERVHISKFTGLSMTTISHWLANVKYQLRRTGGTKFLKNLDTGHPVFFCNDCASQFRTASTYINHLETHLGFSLKDLSKLPLNQIQEQQNVSKVLANKALGPVGAAEDDLGSPFQCKLCNRTFASKHAVKLHLSKTHGKSPEDHLIYVTELEKQ*