Part of scaffold_74 (Scaffold)

For more information consult the page for scaffold_74 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

KATNA1 ENSTTRG00000006025 (Bottlenosed dolphin)

Gene Details

katanin p60 (ATPase containing) subunit A 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000005695, Bottlenosed dolphin)

Protein Percentage 75.62%
cDNA percentage 75.41%
Ka/Ks Ratio 0.06701 (Ka = 0.002, Ks = 0.0292)

BT.41985 ENSBTAG00000032024 (Cow)

Gene Details

katanin p60 ATPase-containing subunit A1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000001172, Cow)

Protein Percentage 99.38%
cDNA percentage 96.6%
Ka/Ks Ratio 0.02057 (Ka = 0.0028, Ks = 0.1382)

KATNA1  (Minke Whale)

Gene Details

katanin p60 (ATPase containing) subunit A 1

External Links

Gene match (Identifier: BACU019099, Minke Whale)

Protein Percentage 100.0%
cDNA percentage 99.59%
Ka/Ks Ratio 0.001 (Ka = 0.0, Ks = 0.0171)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 975 bp    Location:1464643..1454439   Strand:-
>bmy_02562
AACAAATCACCTGCTGCAGTTACAGAACCAGAGACAAATAAATTTGATAGTACTGGATACGATAAGGACTTAGTAGAAGCTTTGGAAAGAGATATAATTTCTCAGAATCCCAATGTTCGATGGGATGATATTGCTGATTTGGTAGAAGCTAAAAAGTTGCTTAAGGAAGCTGTGGTGTTACCAATGTGGATGCCAGAATTCTTCAAAGGCATTAGGAGACCATGGAAAGGAGTGTTGATGGTTGGCCCACCTGGCACAGGAAAGACCCTCCTTGCTAAAGCAGTAGCTACTGAATGCAAGACAACGTTCTTCAACGTCTCTTCATCAACTCTGACTTCCAAATACAGAGGAGAGTCTGAGAAGCTTGTTCGTCTTCTGTTCGAAATGGCTCGATTTTACTCTCCAGCCACCATATTTATCGATGAGATAGATTCCATTTGTAGCCGCAGAGGGACTTCCGAAGAGCACGAGGCAAGCAGAAGGGTGAAAGCCGAGCTGCTGATTCAGATGGACGGTGTTGGAGGTGCTTCTGAAAATGATGACCCTTCCAAAATGGTTATGGTTCTGGCAGCTACTAATTTTCCCTGGGATATTGATGAGGCTTTAAGACGACGTCTTGAAAAAAGAATCTATATTCCATTACCATCAGCAAAAGGCAGGGAGGAGCTATTACGAATAAGTCTACGTGAGCTGGAATTGGCTGATGATGTTGACCTTGCAAGTATAGCAGAAAACATGGAAGGTTATTCAGGTGCGGACATTACCAACGTGTGCAGGGATGCATCCTTGATGGCAATGAGAAGGCGTATTGAAGGTTTGACCCCAGAAGAAATCAGAAATCTTTCAAGAGAAGAAATGCACATGCCTACAACTATGGAGGATTTTGAAATGGCTTTAAAAAAGGTTTCTAAGTCAGTATCTGCTGCAGACATTGAAAGATATGAGAAGTGGATATTTGAGTTTGGATCATGCTAA

Related Sequences

bmy_02562T0 Protein

Length: 325 aa      View alignments
>bmy_02562T0
NKSPAAVTEPETNKFDSTGYDKDLVEALERDIISQNPNVRWDDIADLVEAKKLLKEAVVLPMWMPEFFKGIRRPWKGVLMVGPPGTGKTLLAKAVATECKTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFYSPATIFIDEIDSICSRRGTSEEHEASRRVKAELLIQMDGVGGASENDDPSKMVMVLAATNFPWDIDEALRRRLEKRIYIPLPSAKGREELLRISLRELELADDVDLASIAENMEGYSGADITNVCRDASLMAMRRRIEGLTPEEIRNLSREEMHMPTTMEDFEMALKKVSKSVSAADIERYEKWIFEFGSC*