Part of scaffold_75 (Scaffold)

For more information consult the page for scaffold_75 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

OCEL1 ENSTTRG00000003130 (Bottlenosed dolphin)

Gene Details

occludin/ELL domain containing 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000002933, Bottlenosed dolphin)

Protein Percentage 91.75%
cDNA percentage 94.01%
Ka/Ks Ratio 0.35374 (Ka = 0.0414, Ks = 0.1169)

OCEL1 ENSBTAG00000011135 (Cow)

Gene Details

occludin/ELL domain-containing protein 1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000044623, Cow)

Protein Percentage 86.11%
cDNA percentage 89.63%
Ka/Ks Ratio 0.28893 (Ka = 0.0682, Ks = 0.2362)

OCEL1  (Minke Whale)

Gene Details

occludin/ELL domain containing 1

External Links

Gene match (Identifier: BACU016696, Minke Whale)

Protein Percentage 77.78%
cDNA percentage 80.56%
Ka/Ks Ratio 0.64578 (Ka = 0.1175, Ks = 0.182)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 645 bp    Location:396532..398037   Strand:+
>bmy_02583
CAGTCCGCCCGCCGACCACCCCCGCCACGCGCGGGCCACGACTACCCCCGCAGGACCCGCCCACCGGTGCGGGGACGCCCGAGCGGCACCACCCCGAAGCCGATGCCCACCCGGGAGGCCCCGCAGAGCCGCGGCTCCCGGGGGAACTTGCAAACCCGCCCGCCTGGCCCTGGTCCCCCGCGACTGGTGCCTGGAGGCCTCGAACCCAGCGCGGCCCGCCCTCTGTGCCAGCCTCAGCCCGGAGCACACGGGACAAGGCCCAAGAAGATTGTATTCGAGGATGAGCTGCCCTCCCGGACCCTCCTGGGCTCCAAGAAGTCTATTAGAGCCGTCCCCGGGGRRCATGTGCCTAGGACCCACCCCGTGCCTGACTATGAGCTTAAGTACCCACCAGTGAGCAACGAGAAGGATCGGAGCCGCTACGCTGCAGTGTTCCAGGACCAGTACCCAGAGTTCTTGGAGCTCCAGCAGGAGGTGGGCTCTGCACAGGCAAAGCTGCAGCAGCTGGAGGCCCTGCTGAACTCACTGCCCCCACCCCGAAGCCAGGCTCGCTGCCACTACCTGAAGGGCAAACTAAGGCACCTCAAGACGCAGATCCAGAAATTCGATGACCAGGGAGACAGCGAGGGCTCTGTGTACTTYTGA

Related Sequences

bmy_02583T0 Protein

Length: 215 aa     
>bmy_02583T0
QSARRPPPPRAGHDYPRRTRPPVRGRPSGTTPKPMPTREAPQSRGSRGNLQTRPPGPGPPRLVPGGLEPSAARPLCQPQPGAHGTRPKKIVFEDELPSRTLLGSKKSIRAVPGXHVPRTHPVPDYELKYPPVSNEKDRSRYAAVFQDQYPEFLELQQEVGSAQAKLQQLEALLNSLPPPRSQARCHYLKGKLRHLKTQIQKFDDQGDSEGSVYF*