Part of scaffold_75 (Scaffold)

For more information consult the page for scaffold_75 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

PLVAP ENSTTRG00000003142 (Bottlenosed dolphin)

Gene Details

plasmalemma vesicle associated protein

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000002945, Bottlenosed dolphin)

Protein Percentage 90.08%
cDNA percentage 93.04%
Ka/Ks Ratio 0.27546 (Ka = 0.0524, Ks = 0.19)

PLVAP ENSBTAG00000005434 (Cow)

Gene Details

plasmalemma vesicle-associated protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000050022, Cow)

Protein Percentage 79.63%
cDNA percentage 84.42%
Ka/Ks Ratio 0.18828 (Ka = 0.1144, Ks = 0.6076)

PLVAP  (Minke Whale)

Gene Details

plasmalemma vesicle associated protein

External Links

Gene match (Identifier: BACU016687, Minke Whale)

Protein Percentage 98.44%
cDNA percentage 98.26%
Ka/Ks Ratio 0.09202 (Ka = 0.0065, Ks = 0.0704)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1155 bp    Location:493039..479327   Strand:-
>bmy_02593
ATGGGCTTGGCGATGGAGCACGGGGGGTCCTATTCACGGGCAGGGGGCAGCCCGAGGGGCTGCTGGTACTATCTGCGCTATTTTTTCCTCTTTGTCTCGCTCATCCAGTTCCTCATCATCCTGGGCCTTGTCCTCTTTATGGTCTACGGCAACGCGCACGTGAGTACCGAATCCAACCTGCAGGCCACCGAGCGCCGGGCTGACGGCCTCTACGGCCAGGTGGTGATCTACATGAATAACCAGCGATACATGGCTGCCATCATCTTGAGCGAGAAACAATGCCAAGAACACCTCAAGGAAACTAACAAGAGCTGCGATGCTTTGGCCCTCACACTGAACCAGAAAGCCAAGACACTGGAGGTGGAGCTGGCAAAGGAGAAGGTGGTATGTACCAAAGACAAGGATGGTCTGGGGTTGGGCAAGCGAGTGATGGAGGAACAGCTGGCCGAGTGCAGCAAAGCCCGGGAGCAGCAACGGCAGGAGAGACAGCTGGCCGAGAACCGGCTGCAGAAGGTGCAGGACCTCTGCCTCCCGCTGGACAAGGACAAGTTCGAGATGGAGCTGCGCAACCTCTGGAGGGACTCCATCATCCCGCGCTCCCTGGACAGCCTGGGCTACAATATGTTCCATCCCATCGGCTCAGAACTGGCCTCCATCCGGAGAATCTGCGACCACATGCCCACCCTCATGAGCTCCAAGGTGGAGGAGCTGGCCCGGAGCTTGCGGGCTGGCATCGAGCGCGTGACCCGGGAGAACTCGGACCTCCAGCGCCAGAAGCTGGAGGCCGAACAGGGTCTGCGCGCCAGTCAGGAGGCCAAGGAGAAGGTGGAGAAGGAGGCCCAGGCCCGGGAGGTCAAGCTCCAGGCTGAATGTGCCCGGCAGACCCAGCTGGCCCTGGAGGAGAAAGCGGTGCTGCGGAAGGAGCGTGACAACCTGGCCAAGGAGCTGGAGGAGAAGAAGCGGGAGGCTGAACAGCTCAAGATGCAGCTGGCGGTCAGCAACTCGGCCCTGGACACCTGCATCAAGGCGAAGTCGCAGCCAATACCAGTGCCAAGACCTGCAGGCCCTGCCCCCAATCCCCCGCCCATTGTGGCTGAGGAGGCTCTAGGCCCCGAGGACCGAGGGGTGGCCCCGACTCACCGGTCTGGAGACTAG

Related Sequences

bmy_02593T0 Protein

Length: 385 aa      View alignments
>bmy_02593T0
MGLAMEHGGSYSRAGGSPRGCWYYLRYFFLFVSLIQFLIILGLVLFMVYGNAHVSTESNLQATERRADGLYGQVVIYMNNQRYMAAIILSEKQCQEHLKETNKSCDALALTLNQKAKTLEVELAKEKVVCTKDKDGLGLGKRVMEEQLAECSKAREQQRQERQLAENRLQKVQDLCLPLDKDKFEMELRNLWRDSIIPRSLDSLGYNMFHPIGSELASIRRICDHMPTLMSSKVEELARSLRAGIERVTRENSDLQRQKLEAEQGLRASQEAKEKVEKEAQAREVKLQAECARQTQLALEEKAVLRKERDNLAKELEEKKREAEQLKMQLAVSNSALDTCIKAKSQPIPVPRPAGPAPNPPPIVAEEALGPEDRGVAPTHRSGD*