Part of scaffold_75 (Scaffold)

For more information consult the page for scaffold_75 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

COLGALT1 ENSTTRG00000002501 (Bottlenosed dolphin)

Gene Details

collagen beta(1-O)galactosyltransferase 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000002344, Bottlenosed dolphin)

Protein Percentage 81.27%
cDNA percentage 82.36%
Ka/Ks Ratio 0.28602 (Ka = 0.0402, Ks = 0.1405)

GLT25D1 ENSBTAG00000012678 (Cow)

Gene Details

Procollagen galactosyltransferase 1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000016841, Cow)

Protein Percentage 92.02%
cDNA percentage 90.55%
Ka/Ks Ratio 0.10507 (Ka = 0.0454, Ks = 0.4321)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1845 bp    Location:635992..655383   Strand:+
>bmy_02601
ATGGCGGCAACCCCACGCGCATGCCGGGGGCACGGGCGGCCCCTCCCGGTGCTGCTGCTGCTGCTGCTGTTGGCGCTGCCGCCTTTGGAGGGCCCGCCAGGCGCCGCCGCCTACTTCCCAGAGGAGCGCTGGAGCCCCGAGTCGCCGCTGCAGGCGCCGCGCGTTCTCGTCGCGCTGCTGGCGCGCAACGCGGCCCACGCGCTGCCTGCCACGCTGGGCGCGCTCGAGCGGCTGCGGCACCCCCGGGACCGCACAGCTCTGTGGGTGGCCACGGACCACAACTCAGACAACACGTCAGCCGTGCTTCGGGAATGGCTGGTGGCCATGAAGAGTTTGTACCACTCTGTGGAGTGGCGGCCGGCAGAGGAGCCCAAGGCTCCGGCCTCTACCCCAGCTGTTCCAAGCTGTGGCCTAGCCCGGCTCACTCTGGCGGCCCACACTGATGCCATGTCGGGTGTTTTGCAGTTTGTGGACGCGGACAACCTGATTCTCAACCCTGACACACTGACCCTGCTCATCGCTGAGAACAAGACGGTGGTGGCCCCCATGCTGGATTCCCGGGCTGCGTACTCCAACTTCTGGTGTGGGATGACCTCCCAGGGCTACTACAAGCGCACGCCTGCCTACATCCCCATCCGCAAGCGGGACCGCCGGGGCTGCTTTGCAGTCCCCATGGTGCACTCGACCTTCCTGATTGACCTGAGGAAGGCGGCATCCAGGAACTTGGCATTCTACCCTCCCCACCCCGACTATACCTGGTCCTTCGACGACATCATTGTTTTTGCCTTCTCCTGCAAACAGGCAGAGGTCCAGATGTACGTCTGCAACAAGGAGGTGTATGGCTTTCTGCCGGTGCCACTGCGGGCACACAGCACCCTCCAGGATGAGGCCGAGAGCTTCATGCATGTGCAGCTGGAGGTCATGGTGAAGCACCCACCCGCGGAGCCCTCGCGGTTCATCTCGGTGCCCAGCAAGACGCCAGACAAGATGGGCTTTGACGAGGTCTTCATGATCAACCTGAAGCGGCGTCAGGACCGACGGGAACGTATGCTGCGCGCGCTGCAGGAGCAGGAGATCGAGTGCCGGCTGGTGGAGGCTGTGGACGGCAAAGCCATGAACACCAGCCAGGTAGAGGCACTGGGCATCCAGATGCTGCCCGGCTACCAGGATCCTTACCACGGGCGGCCCCTCACCAAGGGCGAACTGGGCTGCTTCCTCAGCCACTATAACATCTGGAAAGAGGTTGTGGACCGCAGGCTGCAGAAATCACTCGTGTTCGAGGACGACCTGCGCTTCGAGATCTTCTTCAAGAGGCGCCTAATGAACCTTATGCAGGATGTGGAGCGGGAGGGTCTGGACTGGGACCTCATCTACGTGGGCCGGAAGCGGATGCAGGTGGAGCACCCCGAAAAGGCTGTGCCCCGCGTGAGGAACCTGGTGGAGGCCGACTACTCGTACTGGACGCTGGCCTACGTGGTCTCCCTGCCAGGCGCCCGCAAGCTGCTGGCTGCCCGGCCACTCTCCAAGATGCTGCCCGTGGACGAGTTCTTGCCGGTCATGTTCGACAAGCACCCAGTGTCTGAATACAAGGCCCACTTCTCCCCTCGGGACCTGCGCGCCTTCTCCGTGGAGCCCCTGCTCGTCTACCCGACACACTACACAGGGGACGACGGGTACGTGAGCGACACGGAGACCTCGGTCGTGTGGAACAACGAGCACGTCAAGACCGACTGGGACCGGGCCAAATCCCAGAAGATGCGCGAGCAGCAGGTCCTGAGCCGCGAGGCCAAGAACTCTGACGTGCTGCAGTCCCCGCTGGACAGCGCTGCCCGGGATGAGCTCTGA

Related Sequences

bmy_02601T0 Protein

Length: 615 aa      View alignments
>bmy_02601T0
MAATPRACRGHGRPLPVLLLLLLLALPPLEGPPGAAAYFPEERWSPESPLQAPRVLVALLARNAAHALPATLGALERLRHPRDRTALWVATDHNSDNTSAVLREWLVAMKSLYHSVEWRPAEEPKAPASTPAVPSCGLARLTLAAHTDAMSGVLQFVDADNLILNPDTLTLLIAENKTVVAPMLDSRAAYSNFWCGMTSQGYYKRTPAYIPIRKRDRRGCFAVPMVHSTFLIDLRKAASRNLAFYPPHPDYTWSFDDIIVFAFSCKQAEVQMYVCNKEVYGFLPVPLRAHSTLQDEAESFMHVQLEVMVKHPPAEPSRFISVPSKTPDKMGFDEVFMINLKRRQDRRERMLRALQEQEIECRLVEAVDGKAMNTSQVEALGIQMLPGYQDPYHGRPLTKGELGCFLSHYNIWKEVVDRRLQKSLVFEDDLRFEIFFKRRLMNLMQDVEREGLDWDLIYVGRKRMQVEHPEKAVPRVRNLVEADYSYWTLAYVVSLPGARKLLAARPLSKMLPVDEFLPVMFDKHPVSEYKAHFSPRDLRAFSVEPLLVYPTHYTGDDGYVSDTETSVVWNNEHVKTDWDRAKSQKMREQQVLSREAKNSDVLQSPLDSAARDEL*