Part of scaffold_75 (Scaffold)

For more information consult the page for scaffold_75 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

NCAN ENSTTRG00000007684 (Bottlenosed dolphin)

Gene Details

neurocan

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000007268, Bottlenosed dolphin)

Protein Percentage 96.13%
cDNA percentage 97.31%
Ka/Ks Ratio 0.39866 (Ka = 0.0199, Ks = 0.0498)

NCAN ENSBTAG00000001764 (Cow)

Gene Details

neurocan core protein precursor

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000002312, Cow)

Protein Percentage 87.65%
cDNA percentage 90.5%
Ka/Ks Ratio 0.29824 (Ka = 0.0665, Ks = 0.2228)

NCAN  (Minke Whale)

Gene Details

neurocan

External Links

Gene match (Identifier: BACU016634, Minke Whale)

Protein Percentage 98.32%
cDNA percentage 98.72%
Ka/Ks Ratio 0.37618 (Ka = 0.009, Ks = 0.0238)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 3765 bp    Location:1945293..1963357   Strand:+
>bmy_02655
ATGCAGAAGGTGGGGTCTGGGTCGGTGCGGGCTGCGCTGGCAGAGCTGGTGGCCCTGCCCTGTCTCTTCACCCTGTGGCCACGGCCAGGTGCAGCCCGAGAAGCCCCTCGGATCAAGTGGACCAAGGTGCGGACTGCATCAGGCCAACGGCAGGACTTGCCCATCCTAGTGGCCAAGGACAACGTGGTTCGAGTGGCCAAGGGCTGGCAGGGACGTGTGTCACTACCTGCCTACCCCCGGCACCGGGTCAACGCCACATTGCTACTGGGGCCACTGAGGGCCAGCGACTCCGGGCTCTACCGCTGCCAGGTGGTGAGGGGCATCGAGGATGAGCAGGACCTGGTGCCCCTGGAAGTGACGGGTGTTGTGTTCCACTACCGAGCAGCCCAGGATCGCTACTCGCTGACCTTCGCTGAGGCCCAGGAGGCCTGCCGTCTCAACTCGGCCACCATTGCAGCCCCGCGGCACCTGCAGGCTGCCTTCGAGGATGGCTTTGACAACTGTGACGCCGGGTGGCTCTCTGACCGCACTGTTCGGTATCCTATCACCCAGTCCCGTCCTGGTTGCTACGGTGACCGTAGCAGCCTTCCAGGGGTGAGGAACTATGGGAGGCGAGACCCACGGGAACTCTACGATGTGTATTGCTTTGCCCGTGAGCTGGGGGGCGAGGTCTTCTACGTAGGCCTGGCCCGCCGCCTGACACTGGCCGGCGCGCGTGCCCAGTGCCGCCGCCAGGGCGCCGTGCTGGCCTCGGTAGGACAGCTGCACCTGGCCTGGCATGAGGGCCTGGACCAGTGCGACCCGGGCTGGCTGGCCGACGGCAGCGTGCGCTACCCGATCCAGACGCCGCGCCGGCGCTGCGGGGGCCCAGTCCCGGGCGTGCGCACCGTCTATAGCTTCGCCAACCGCACCCGCTTCCCGGCGCCGGGAGAGCGCTACGACGCCTACTGCTTCCGAGCTCATCACCCTACATCACTACATGGAAACTCAGAGATGCCGTCGTCTGGGGATGAGGGGGAGATTCTGTCAGCAGAAGGGCCCCCCGCCCAAGAACTGGAGCCCAGCCTGGAGGAGGAGGAGGTAGTCACCCCAGACTTCCAGGAGCCTCTGGTGTCCAGTGGGGAAGAAGAACCTCTGATCTTGGCAGAGAAACAGGAGTCTCGAGAGACCCCCAGTCCTGCCACTGGGGGCCTCACACTAGCCTCAAGGCCTGCTCTGGAGGCTGAGGAGGTGTGGCTGAGCACGGTGTCCCCCGCCCCCAGCAACGTGGAGGCAGGCACTGCGGTGGGCATGCACACAGAGGCAACCCCAGCCAGCACCATGCCCAGGAGGAGGGGGCGCTTTAAAGGGTTGAACGGGCGCCACTTCCAGCAACAGGAACCCCAGCGAGGGCTGAAGGGGGTGCTCCAGGCCAGCGTCCAGCCCCCCACCCCAGAGGTTGCTGGGAATTACGTGGAGCCTCCCCTGGCCACAGGAGCCACTGACGCCTTGGGGAGTGGCCGGAGCCAAAGCCCCTGGGCTGTGCTGACCAATGAGGTGGATGTGCCTGGAGCTGGTTCCCCTGGTGGCAGGAGCCCCCCAGAGCCCTGGCTGTGGCCCCCAACCATGGTCCCACCCATCACCCTTGGCCTGGAACTAGAGGAAGCCAAGGGCCCCAGTGTGAGGCCAGCCACCCCCGACCTGCCCTGGTCCTCCTCGGAGGCCACTGCCTTGGCTCCCAACCCCTTGAAGGGCCCCAGCACAGCCCGCTGGGAGGCTTCCCCCACAGTCATTTCTCCAGACCTCCCTGTCATGGCCATGCTTCGTGCCCCCAAACTGTGGCTCCTGTCACACCCTACGCCCCTCCCCACCGATGCCAGTGAGGTAAAGGGGTATAGTGAAGCCATGGCCGCTGCCCCACCCTCCCCTGCCTCAGAGATCGAGGCCAGCCCCCAGGATCCCATCCATCCAGAAGTGTATTCCCTGCCCTCCTCCTTGGGCCTGACGGGACAAGGTGGAGAGGCCACATCCCCGACACTCAGCAGCCATGGCGAAGGAAGTCCTACAGCTCCTTTGCAGGCAGCCACAGACACACAGGCTGGAGCTGGTCCTAACTCCTTCAGAGCAGACTTCGGAAAAACTGGGGGGGCCAGCCCTACTGGGCTCAGCAAAGCTGAGCACCCCAGATCCAACCCACAGGCTTCTGTGGATGGGAATGTGGTGGCAGCCATCACTCCCACTGAGACTGCCACTGAGCCCATGGGAGCCAGAGGCATCTTGGGGTCTGAGTCTGGGGTCTTCAACACAGCAGAGACCCCCACTTCCAGCTTGCAGGCCAACATGGACGAGGCACAGGGCATGTGGCCGTCACTGCACAGTGAAGGGCTAGACCCCCATTCCCCATCTGTGCTCTTGGGGGTCCCTGGGGTCTCCTTGATGCCCAAGGTCACCCCACATTTGGAGCCTTCGGCTGCTACAGATGGAGGAGCCACAGTGGGTCCCATGGATTCCATGGCCACACTAGACACCAGCGATGCTGGTGGGAATTGGGAACCTGGATCCCACGTGGTTGAGGGAGCTGAAAGCCCCACCTTGAGCCCTCAAATGGCTGTGGATACAAGTGTGGTGATGTCCCTCATGTCCCTGGACCTGGGGGACAAGGTTGGGGTCCTGGCCATGTCCACAATGGCCTCCTCAAGCTCCCAACCCCATCCAGAGCCGGAGGGCCAGATGGTGACCCAGGGCACCCTGAGAGGCTTGGAGCCTCCACATGAGGGCAGCCCCTCAGGGGAGCCCGCTCTTCCTCCTTGGACACCGACAGCAGCCAGCGAGGACAAGCCCATTTCAGTTTCCTCGGGGGAGCCTACAGTGCCATGGGACTCCCCCAGCACCCTGCTGCCTGCCTCCCTGGGCCCAGAGGAGTTTGAGCTGGAGGTCCTGGCGGGGAGCCCAGGTGTGGAGAGCTTCTGGGAGGAGGCAGCAAGTGGAGAGGAGCCAGCCCTGCCAGGAACCCCTGCAAATGGGAGTGCAGAGGAGGATATAGATGACTGCATCTCCAGCCCCTGTGAGAATGGAGGCACCTGCATCGACGAGGTCAACGCCTTTGTTTGCCTTTGCCTCCCCAGCTACGGGGGCAGCCTCTGTGAGAAAGACACAGAGGGCTGTGACCATGGCTGGCACAAGTTTCAGGGCCACTGCTACCGCTACTTCGCCCATCGGCGGGCATGGGAGGATGCCGAGAGGGACTGCCGCCGTCGAGCCGGCCACCTGACCAGCATCCACTCACCTGAAGAACACGGCTTCATTAACAGTTTTGGGCGTGAAAACACGTGGATCGGCCTAAACGACAGGATCGTGGAGAGGGATTTCCAGTGGACGGACAACACGGGGCTGAGCGGGCACTGGAATGATGTTCCCTGCAACTACAACCTCCCCTATGTGTGTAAGAAGGGCACAGTGCTGTGTGGTCCCCCTCCAGCAGTGGAGAATGCCTTGCCCATCGGTGCCCGCAAGGCCAAGTATAATGTCCACGCCACTGTACGCTACCAGTGCGACGAAGGATTTGCCCAGCACCATGTGGCCATCATCCGATGCCGGAGCAATGGCAAATGGGACCGGCCCCAAATCGTCTGCACCAAACCCAGACGATCCCATCGGATGCGGCGACACCATCACCACCACCAACACCACCACCAGCATCACCACCACAAATCCCGCAAGGAGCGCAGAAAACACAAGAAGCACCCAGCAGAGGACTGGGAGAAGGACGAAGGGAATTTCTGCTGA

Related Sequences

bmy_02655T0 Protein

Length: 1255 aa      View alignments
>bmy_02655T0
MQKVGSGSVRAALAELVALPCLFTLWPRPGAAREAPRIKWTKVRTASGQRQDLPILVAKDNVVRVAKGWQGRVSLPAYPRHRVNATLLLGPLRASDSGLYRCQVVRGIEDEQDLVPLEVTGVVFHYRAAQDRYSLTFAEAQEACRLNSATIAAPRHLQAAFEDGFDNCDAGWLSDRTVRYPITQSRPGCYGDRSSLPGVRNYGRRDPRELYDVYCFARELGGEVFYVGLARRLTLAGARAQCRRQGAVLASVGQLHLAWHEGLDQCDPGWLADGSVRYPIQTPRRRCGGPVPGVRTVYSFANRTRFPAPGERYDAYCFRAHHPTSLHGNSEMPSSGDEGEILSAEGPPAQELEPSLEEEEVVTPDFQEPLVSSGEEEPLILAEKQESRETPSPATGGLTLASRPALEAEEVWLSTVSPAPSNVEAGTAVGMHTEATPASTMPRRRGRFKGLNGRHFQQQEPQRGLKGVLQASVQPPTPEVAGNYVEPPLATGATDALGSGRSQSPWAVLTNEVDVPGAGSPGGRSPPEPWLWPPTMVPPITLGLELEEAKGPSVRPATPDLPWSSSEATALAPNPLKGPSTARWEASPTVISPDLPVMAMLRAPKLWLLSHPTPLPTDASEVKGYSEAMAAAPPSPASEIEASPQDPIHPEVYSLPSSLGLTGQGGEATSPTLSSHGEGSPTAPLQAATDTQAGAGPNSFRADFGKTGGASPTGLSKAEHPRSNPQASVDGNVVAAITPTETATEPMGARGILGSESGVFNTAETPTSSLQANMDEAQGMWPSLHSEGLDPHSPSVLLGVPGVSLMPKVTPHLEPSAATDGGATVGPMDSMATLDTSDAGGNWEPGSHVVEGAESPTLSPQMAVDTSVVMSLMSLDLGDKVGVLAMSTMASSSSQPHPEPEGQMVTQGTLRGLEPPHEGSPSGEPALPPWTPTAASEDKPISVSSGEPTVPWDSPSTLLPASLGPEEFELEVLAGSPGVESFWEEAASGEEPALPGTPANGSAEEDIDDCISSPCENGGTCIDEVNAFVCLCLPSYGGSLCEKDTEGCDHGWHKFQGHCYRYFAHRRAWEDAERDCRRRAGHLTSIHSPEEHGFINSFGRENTWIGLNDRIVERDFQWTDNTGLSGHWNDVPCNYNLPYVCKKGTVLCGPPPAVENALPIGARKAKYNVHATVRYQCDEGFAQHHVAIIRCRSNGKWDRPQIVCTKPRRSHRMRRHHHHHQHHHQHHHHKSRKERRKHKKHPAEDWEKDEGNFC*