Sequence detailsbmy_02655 (Coding sequence)

Part of scaffold_75 (SequenceType object (1))

For more information consult the page for scaffold_75 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

NCANENSTTRG00000007684 (Bottlenosed dolphin)

Gene Details

neurocan

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000007268, Bottlenosed dolphin)

Protein Percentage 96.13%
cDNA percentage 97.31%
Ka/Ks Ratio 0.39866 (Ka = 0.0199, Ks = 0.0498)

NCANENSBTAG00000001764 (Cow)

Gene Details

neurocan core protein precursor

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000002312, Cow)

Protein Percentage 87.65%
cDNA percentage 90.5%
Ka/Ks Ratio 0.29824 (Ka = 0.0665, Ks = 0.2228)

NCAN (Minke Whale)

Gene Details

neurocan

External Links

Gene match (Identifier: BACU016634, Minke Whale)

Protein Percentage 98.32%
cDNA percentage 98.72%
Ka/Ks Ratio 0.37618 (Ka = 0.009, Ks = 0.0238)

Additional orthologs identified in other species via the OPTIC pipeline.

NCAN (Human)   Ncan (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 3765 bp    Location:1945293..1963357   Strand:+
Raw sequence 
>bmy_02655
ATGCAGAAGGTGGGGTCTGGGTCGGTGCGGGCTGCGCTGGCAGAGCTGGTGGCCCTGCCCTGTCTCTTCACCCTGTGGCCACGGCCAGGTGCAGCCCGAGAAGCCCCTCGGATCAAGTGGACCAAGGTGCGGACTGCATCAGGCCAACGGCAGGACTTGCCCATCCTAGTGGCCAAGGACAACGTGGTTCGAGTGGCCAAGGGCTGGCAGGGACGTGTGTCACTACCTGCCTACCCCCGGCACCGGGTCAACGCCACATTGCTACTGGGGCCACTGAGGGCCAGCGACTCCGGGCTCTACCGCTGCCAGGTGGTGAGGGGCATCGAGGATGAGCAGGACCTGGTGCCCCTGGAAGTGACGGGTGTTGTGTTCCACTACCGAGCAGCCCAGGATCGCTACTCGCTGACCTTCGCTGAGGCCCAGGAGGCCTGCCGTCTCAACTCGGCCACCATTGCAGCCCCGCGGCACCTGCAGGCTGCCTTCGAGGATGGCTTTGACAACTGTGACGCCGGGTGGCTCTCTGACCGCACTGTTCGGTATCCTATCACCCAGTCCCGTCCTGGTTGCTACGGTGACCGTAGCAGCCTTCCAGGGGTGAGGAACTATGGGAGGCGAGACCCACGGGAACTCTACGATGTGTATTGCTTTGCCCGTGAGCTGGGGGGCGAGGTCTTCTACGTAGGCCTGGCCCGCCGCCTGACACTGGCCGGCGCGCGTGCCCAGTGCCGCCGCCAGGGCGCCGTGCTGGCCTCGGTAGGACAGCTGCACCTGGCCTGGCATGAGGGCCTGGACCAGTGCGACCCGGGCTGGCTGGCCGACGGCAGCGTGCGCTACCCGATCCAGACGCCGCGCCGGCGCTGCGGGGGCCCAGTCCCGGGCGTGCGCACCGTCTATAGCTTCGCCAACCGCACCCGCTTCCCGGCGCCGGGAGAGCGCTACGACGCCTACTGCTTCCGAGCTCATCACCCTACATCACTACATGGAAACTCAGAGATGCCGTCGTCTGGGGATGAGGGGGAGATTCTGTCAGCAGAAGGGCCCCCCGCCCAAGAACTGGAGCCCAGCCTGGAGGAGGAGGAGGTAGTCACCCCAGACTTCCAGGAGCCTCTGGTGTCCAGTGGGGAAGAAGAACCTCTGATCTTGGCAGAGAAACAGGAGTCTCGAGAGACCCCCAGTCCTGCCACTGGGGGCCTCACACTAGCCTCAAGGCCTGCTCTGGAGGCTGAGGAGGTGTGGCTGAGCACGGTGTCCCCCGCCCCCAGCAACGTGGAGGCAGGCACTGCGGTGGGCATGCACACAGAGGCAACCCCAGCCAGCACCATGCCCAGGAGGAGGGGGCGCTTTAAAGGGTTGAACGGGCGCCACTTCCAGCAACAGGAACCCCAGCGAGGGCTGAAGGGGGTGCTCCAGGCCAGCGTCCAGCCCCCCACCCCAGAGGTTGCTGGGAATTACGTGGAGCCTCCCCTGGCCACAGGAGCCACTGACGCCTTGGGGAGTGGCCGGAGCCAAAGCCCCTGGGCTGTGCTGACCAATGAGGTGGATGTGCCTGGAGCTGGTTCCCCTGGTGGCAGGAGCCCCCCAGAGCCCTGGCTGTGGCCCCCAACCATGGTCCCACCCATCACCCTTGGCCTGGAACTAGAGGAAGCCAAGGGCCCCAGTGTGAGGCCAGCCACCCCCGACCTGCCCTGGTCCTCCTCGGAGGCCACTGCCTTGGCTCCCAACCCCTTGAAGGGCCCCAGCACAGCCCGCTGGGAGGCTTCCCCCACAGTCATTTCTCCAGACCTCCCTGTCATGGCCATGCTTCGTGCCCCCAAACTGTGGCTCCTGTCACACCCTACGCCCCTCCCCACCGATGCCAGTGAGGTAAAGGGGTATAGTGAAGCCATGGCCGCTGCCCCACCCTCCCCTGCCTCAGAGATCGAGGCCAGCCCCCAGGATCCCATCCATCCAGAAGTGTATTCCCTGCCCTCCTCCTTGGGCCTGACGGGACAAGGTGGAGAGGCCACATCCCCGACACTCAGCAGCCATGGCGAAGGAAGTCCTACAGCTCCTTTGCAGGCAGCCACAGACACACAGGCTGGAGCTGGTCCTAACTCCTTCAGAGCAGACTTCGGAAAAACTGGGGGGGCCAGCCCTACTGGGCTCAGCAAAGCTGAGCACCCCAGATCCAACCCACAGGCTTCTGTGGATGGGAATGTGGTGGCAGCCATCACTCCCACTGAGACTGCCACTGAGCCCATGGGAGCCAGAGGCATCTTGGGGTCTGAGTCTGGGGTCTTCAACACAGCAGAGACCCCCACTTCCAGCTTGCAGGCCAACATGGACGAGGCACAGGGCATGTGGCCGTCACTGCACAGTGAAGGGCTAGACCCCCATTCCCCATCTGTGCTCTTGGGGGTCCCTGGGGTCTCCTTGATGCCCAAGGTCACCCCACATTTGGAGCCTTCGGCTGCTACAGATGGAGGAGCCACAGTGGGTCCCATGGATTCCATGGCCACACTAGACACCAGCGATGCTGGTGGGAATTGGGAACCTGGATCCCACGTGGTTGAGGGAGCTGAAAGCCCCACCTTGAGCCCTCAAATGGCTGTGGATACAAGTGTGGTGATGTCCCTCATGTCCCTGGACCTGGGGGACAAGGTTGGGGTCCTGGCCATGTCCACAATGGCCTCCTCAAGCTCCCAACCCCATCCAGAGCCGGAGGGCCAGATGGTGACCCAGGGCACCCTGAGAGGCTTGGAGCCTCCACATGAGGGCAGCCCCTCAGGGGAGCCCGCTCTTCCTCCTTGGACACCGACAGCAGCCAGCGAGGACAAGCCCATTTCAGTTTCCTCGGGGGAGCCTACAGTGCCATGGGACTCCCCCAGCACCCTGCTGCCTGCCTCCCTGGGCCCAGAGGAGTTTGAGCTGGAGGTCCTGGCGGGGAGCCCAGGTGTGGAGAGCTTCTGGGAGGAGGCAGCAAGTGGAGAGGAGCCAGCCCTGCCAGGAACCCCTGCAAATGGGAGTGCAGAGGAGGATATAGATGACTGCATCTCCAGCCCCTGTGAGAATGGAGGCACCTGCATCGACGAGGTCAACGCCTTTGTTTGCCTTTGCCTCCCCAGCTACGGGGGCAGCCTCTGTGAGAAAGACACAGAGGGCTGTGACCATGGCTGGCACAAGTTTCAGGGCCACTGCTACCGCTACTTCGCCCATCGGCGGGCATGGGAGGATGCCGAGAGGGACTGCCGCCGTCGAGCCGGCCACCTGACCAGCATCCACTCACCTGAAGAACACGGCTTCATTAACAGTTTTGGGCGTGAAAACACGTGGATCGGCCTAAACGACAGGATCGTGGAGAGGGATTTCCAGTGGACGGACAACACGGGGCTGAGCGGGCACTGGAATGATGTTCCCTGCAACTACAACCTCCCCTATGTGTGTAAGAAGGGCACAGTGCTGTGTGGTCCCCCTCCAGCAGTGGAGAATGCCTTGCCCATCGGTGCCCGCAAGGCCAAGTATAATGTCCACGCCACTGTACGCTACCAGTGCGACGAAGGATTTGCCCAGCACCATGTGGCCATCATCCGATGCCGGAGCAATGGCAAATGGGACCGGCCCCAAATCGTCTGCACCAAACCCAGACGATCCCATCGGATGCGGCGACACCATCACCACCACCAACACCACCACCAGCATCACCACCACAAATCCCGCAAGGAGCGCAGAAAACACAAGAAGCACCCAGCAGAGGACTGGGAGAAGGACGAAGGGAATTTCTGCTGA

Related Sequences

bmy_02655T0 SequenceType object (3)

Length: 1255 aa      View alignments
>bmy_02655T0
MQKVGSGSVRAALAELVALPCLFTLWPRPGAAREAPRIKWTKVRTASGQRQDLPILVAKDNVVRVAKGWQGRVSLPAYPRHRVNATLLLGPLRASDSGLYRCQVVRGIEDEQDLVPLEVTGVVFHYRAAQDRYSLTFAEAQEACRLNSATIAAPRHLQAAFEDGFDNCDAGWLSDRTVRYPITQSRPGCYGDRSSLPGVRNYGRRDPRELYDVYCFARELGGEVFYVGLARRLTLAGARAQCRRQGAVLASVGQLHLAWHEGLDQCDPGWLADGSVRYPIQTPRRRCGGPVPGVRTVYSFANRTRFPAPGERYDAYCFRAHHPTSLHGNSEMPSSGDEGEILSAEGPPAQELEPSLEEEEVVTPDFQEPLVSSGEEEPLILAEKQESRETPSPATGGLTLASRPALEAEEVWLSTVSPAPSNVEAGTAVGMHTEATPASTMPRRRGRFKGLNGRHFQQQEPQRGLKGVLQASVQPPTPEVAGNYVEPPLATGATDALGSGRSQSPWAVLTNEVDVPGAGSPGGRSPPEPWLWPPTMVPPITLGLELEEAKGPSVRPATPDLPWSSSEATALAPNPLKGPSTARWEASPTVISPDLPVMAMLRAPKLWLLSHPTPLPTDASEVKGYSEAMAAAPPSPASEIEASPQDPIHPEVYSLPSSLGLTGQGGEATSPTLSSHGEGSPTAPLQAATDTQAGAGPNSFRADFGKTGGASPTGLSKAEHPRSNPQASVDGNVVAAITPTETATEPMGARGILGSESGVFNTAETPTSSLQANMDEAQGMWPSLHSEGLDPHSPSVLLGVPGVSLMPKVTPHLEPSAATDGGATVGPMDSMATLDTSDAGGNWEPGSHVVEGAESPTLSPQMAVDTSVVMSLMSLDLGDKVGVLAMSTMASSSSQPHPEPEGQMVTQGTLRGLEPPHEGSPSGEPALPPWTPTAASEDKPISVSSGEPTVPWDSPSTLLPASLGPEEFELEVLAGSPGVESFWEEAASGEEPALPGTPANGSAEEDIDDCISSPCENGGTCIDEVNAFVCLCLPSYGGSLCEKDTEGCDHGWHKFQGHCYRYFAHRRAWEDAERDCRRRAGHLTSIHSPEEHGFINSFGRENTWIGLNDRIVERDFQWTDNTGLSGHWNDVPCNYNLPYVCKKGTVLCGPPPAVENALPIGARKAKYNVHATVRYQCDEGFAQHHVAIIRCRSNGKWDRPQIVCTKPRRSHRMRRHHHHHQHHHQHHHHKSRKERRKHKKHPAEDWEKDEGNFC*