Part of scaffold_76 (Scaffold)

For more information consult the page for scaffold_76 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

NFKB1 ENSTTRG00000010852 (Bottlenosed dolphin)

Gene Details

nuclear factor of kappa light polypeptide gene enhancer in B-cells 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000010297, Bottlenosed dolphin)

Protein Percentage 88.36%
cDNA percentage 90.02%
Ka/Ks Ratio 0.5229 (Ka = 0.0618, Ks = 0.1182)

BT.60919 ENSBTAG00000020270 (Cow)

Gene Details

nuclear factor NF-kappa-B p105 subunit

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000027016, Cow)

Protein Percentage 89.55%
cDNA percentage 88.54%
Ka/Ks Ratio 0.23949 (Ka = 0.0711, Ks = 0.2967)

NFKB1  (Minke Whale)

Gene Details

nuclear factor of kappa light polypeptide gene enhancer in B-cells 1

External Links

Gene match (Identifier: BACU004537, Minke Whale)

Protein Percentage 97.57%
cDNA percentage 98.12%
Ka/Ks Ratio 0.3332 (Ka = 0.0119, Ks = 0.0356)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 2682 bp    Location:93868..154013   Strand:+
>bmy_02671
ATGGAAGATTCAGATTTAGGTTGTACCCTTGAAGAATGGATGGTTCAACACAGGGAAGAGAAGGAAGGGACACCCCCAGGTGTATCATCATCATCACTTCATGAGGAAAAACTCAGCAGAAAAGAACTACTTCATGTGTCACGTCTCATATTCATGTTGACTCTACCTTCTGCCAAAATCTGCAACTATGTGGGACCTGCAAAGGTCATTGTTCAGTTGGTCACGAATGGAAAAAACATCCACCTGCATGCACACAGCCTGGTGGGAAAACACTGTGAGGATGGCATCTGCACTGTAACTGCTGGACCCAAGGACATGGTGGTCGGCTTTGCAAACCTGGGTATCCTTCACGTGACAAAGAAAAAAGTATTTGAAACACTGGAAGCACGAATGACAGATGCATGTATAAGGGGCTATAATCCCGGACTTCTGGTGCATCCTGATCTTGCCTATTTACAAGCAGAAGGTGGAGGAGACCGGCAGCTCACAGAAGCCCCCAATGCCTCCAACTTGAAAATAGTAAGGATGGACAGGACAGCTGGATGCGTAACTGGAGGGGAAGAGATTTATCTTCTCTGTGACAAGGTTCAGAAAGATGACATCCAGATTCGATTTTATGAGGAGGAGGAAAATGGTGGAATCTGGGAAGGATTCGGAGATTTTTCCCCCACAGATGTTCATAGACAATTTGCCATCGTCTTCAAAACTCCAAAGTATAAAGATATCAACATTACAAAACCAGCCTCTGTGTTCGTCCAGCTTCGGAGGAAATCTGATTTGGAAACCAGTGAACCAAAACCTTTTCTCTACTATCCTGAAATTAAAGATAAAGAGGAAGTGCAGAGGAAACGGCAGAAGCTCATGCCCAATTTCTCGGATAGTTTCGGTGGCGGCAGTGGGGCGGGAGCTGGAGGTGGAGGCATGTTCGGCAGCAGCGGTGGAGGCGGCGGTGCTGGAAGTACCGGCCCAGGGTATGGCTTCCCGCACTATGGATTTCCTACATATGGTGGAATTACCTTCCACCCTGGAACCGCTAAATCTAATGCTGGGATGAAGCATGGAACCATAGACACCCCATCTAAAAATGACCCTGAAGGTTATGACAAGAGTGATGACAGAGAGGCCATAAATCTCTCTGGGCAGGCAGCAGAGAGCACCAAGCAAGATAAAGAGTCCTGCAGGCGGGGCGATGAGGCTGATCTGGCGTACTCGGTAGGAGTGCAGGAGGAGAATCGCAGTTCCCAGGATAACCTCTTTCTGGAGAAGGCTATGCAGCTTGCCAAGCAGCACGCGAATGCCCTTTTTGACTACGCAGTGACAGGAGATGTGAAGATGCTGCTGGCTGTCCAGCGCCACCTCACTGCGGTGCAGGACGAGAACGGGGACAGTGTCTTACACTTAGCAATCATCCACCTTCATGCTCAGCTTGTGAGAGATCTGCTAGAAGTCACATCTGGCTTGATTTCTGATGAAATTATCAACATGAGAAATGATCTCTACCAGACACCCTTGCACTTGGCAGTGATCACCAAGCAGGAGGCTGTGGTGGAGGACTTGCTGAGGGCTGGGGCCGACCTGAGCCTTCTGGACCGCTTGGGTAACTCTGTTTTGCACCTAGCTGCCAAAGAAGGACACGATAAAATTCTCAGTATTTTACTCAAGCACAAGAAGGCAGCACAACTTATCAACCACCCCAACGGGGAAGGTCTGAACGCCATTCACGTAGCCATGGTGACCAACAGCTTGCCGTGTCTGCTGCTGCTCCTGGCCGCGGGGGCTGACGTCAACGCTCAGGAGCGCAAGTCGGGGCGCACGGCRCTGCACCTGGCCGTGGAGCACGACAACATCTCCTTGGCTGGCTGCCTGCTCCTGGAGGGTGATGCCCATGTAGACAGCACCACCTATGATGGAACTACACCCCTGCACATAGCGGCTGGGAGAGGGTCCACGAGGCTGGCAGCTCTTCTCAAGGCAGCAGGAGCAGATCCCCTGGTGGAGAACTTTGAGCCTCTGTACGACCTGGATGACTCTTGGGACGAGGATGGAGAGGATGAAGGAGTCCTGCCAGGAACCACTCCTCTGGATATGGCCACCAGCTGGCAGGTATTTGACATATTAAATGGGAAACCCTATGAGCCAGAGTTTACATCTGATGATTTACTGGCACAGGGAGACATGAAACAGCTGACTGAAGATGCGAAGTTGCAGCTCTACAAGTTGCTAGAAATTCCTGATCCAGACAAAAACTGGGCTACTCTGGCACAGAAATTAGGTTTGGGGATACTAAATAATGCCTTCCGGCTGAGTCCTGCTCCTTCCAAAACTCTTATGGACAACTATGAGGTCTCTGGGGGGACCATAAAAGAGCTGGTGGAGGCCCTGAGGCAGATGGGCTATACCGAAGCCATTGAAGTGATCCAGGCGGCCTTCTGCACGTCGGGAAGCGCAGCCACCAGCCCGGTGGAGACCACCTCTCAGGCCCACTCGCTGCCCTTCTCGCCTGCCTCCACAGGGCAGCAAATAGACGAGTTCCGGGACGATAGCATCTGTGACAGCGGCGTAGAGACATCCTTCCGCAAACTCAGCTTCACAGAGTCTCTGACCAGCGGCAGCTCGTTGCTAACTATTAACAAAGTGCCCCACGACTACGGGCAGGAAGGACCTCTAGAAGGCAAAATTTAG

Related Sequences

bmy_02671T0 Protein

Length: 894 aa      View alignments
>bmy_02671T0
MEDSDLGCTLEEWMVQHREEKEGTPPGVSSSSLHEEKLSRKELLHVSRLIFMLTLPSAKICNYVGPAKVIVQLVTNGKNIHLHAHSLVGKHCEDGICTVTAGPKDMVVGFANLGILHVTKKKVFETLEARMTDACIRGYNPGLLVHPDLAYLQAEGGGDRQLTEAPNASNLKIVRMDRTAGCVTGGEEIYLLCDKVQKDDIQIRFYEEEENGGIWEGFGDFSPTDVHRQFAIVFKTPKYKDINITKPASVFVQLRRKSDLETSEPKPFLYYPEIKDKEEVQRKRQKLMPNFSDSFGGGSGAGAGGGGMFGSSGGGGGAGSTGPGYGFPHYGFPTYGGITFHPGTAKSNAGMKHGTIDTPSKNDPEGYDKSDDREAINLSGQAAESTKQDKESCRRGDEADLAYSVGVQEENRSSQDNLFLEKAMQLAKQHANALFDYAVTGDVKMLLAVQRHLTAVQDENGDSVLHLAIIHLHAQLVRDLLEVTSGLISDEIINMRNDLYQTPLHLAVITKQEAVVEDLLRAGADLSLLDRLGNSVLHLAAKEGHDKILSILLKHKKAAQLINHPNGEGLNAIHVAMVTNSLPCLLLLLAAGADVNAQERKSGRTALHLAVEHDNISLAGCLLLEGDAHVDSTTYDGTTPLHIAAGRGSTRLAALLKAAGADPLVENFEPLYDLDDSWDEDGEDEGVLPGTTPLDMATSWQVFDILNGKPYEPEFTSDDLLAQGDMKQLTEDAKLQLYKLLEIPDPDKNWATLAQKLGLGILNNAFRLSPAPSKTLMDNYEVSGGTIKELVEALRQMGYTEAIEVIQAAFCTSGSAATSPVETTSQAHSLPFSPASTGQQIDEFRDDSICDSGVETSFRKLSFTESLTSGSSLLTINKVPHDYGQEGPLEGKI*