Part of scaffold_76 (Scaffold)

For more information consult the page for scaffold_76 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

UCP1 ENSBTAG00000004647 (Cow)

Gene Details

mitochondrial brown fat uncoupling protein 1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000006097, Cow)

Protein Percentage 84.08%
cDNA percentage 89.39%
Ka/Ks Ratio 0.44797 (Ka = 0.0886, Ks = 0.1979)

UCP1  (Minke Whale)

Gene Details

uncoupling protein 1 (mitochondrial, proton carrier)

External Links

Gene match (Identifier: BACU019018, Minke Whale)

Protein Percentage 92.04%
cDNA percentage 96.85%
Ka/Ks Ratio 6.78042 (Ka = 0.0438, Ks = 0.0065)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 606 bp    Location:1740707..1737483   Strand:-
>bmy_02687
ATGGTGGCACTCACAGCCTCAGACGTGCCCCCGACCATGGCGGTCACGATCTTCTCGGCTGGAGTGGCGGCCGGCGTGGCGGATGTGATCACCTTCCCGCTGGACACGGCCAAAGTCCGGCTACAGATCCAATGCGAATGCCAGATCTCCAGTGCTGTTAGGTATAAAAGTGTCCTGGGAACAATCACCACTCTGGCAAAAACAAGAGGGCCAATGAAACTCTACAGCGGGCTGCCTGCTGGCCTCCAGAGACAAATAAGCTTTGCCTCTCTTAGGATCAGCATCTATGAAAGCATCCAGGAGTTCTTCACCACAGGGAAAGAAAGAAGCAGGGTCTCAGCGGGCCTAACGAATGGCGGCGTGGCCGTGTTCATTGGGCAACCCACAGAGGTAGTGAAGGTCAGACTTCAAGTGCCAAGCGGTCTACATGGTCCCAAACCTCGCTACACTGGGACTTACAATGCTTATAGAATTATAGCAACAACAGAAGGCTTGACGGGGCTTTGGAAAGGTTCTACTCCGAATCTGACAAGAATTGTCATCATCAGCTGTACAGAGCTAGTAACGTATGACCTAATGAAGGAGACCCTTGTGAAAAACAATTAA

Related Sequences

bmy_02687T0 Protein

Length: 202 aa      View alignments
>bmy_02687T0
MVALTASDVPPTMAVTIFSAGVAAGVADVITFPLDTAKVRLQIQCECQISSAVRYKSVLGTITTLAKTRGPMKLYSGLPAGLQRQISFASLRISIYESIQEFFTTGKERSRVSAGLTNGGVAVFIGQPTEVVKVRLQVPSGLHGPKPRYTGTYNAYRIIATTEGLTGLWKGSTPNLTRIVIISCTELVTYDLMKETLVKNN*