Sequence detailsbmy_02711 (Coding sequence)

Part of scaffold_77 (SequenceType object (1))

For more information consult the page for scaffold_77 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TRAF7ENSTTRG00000008169 (Bottlenosed dolphin)

Gene Details

TNF receptor-associated factor 7, E3 ubiquitin protein ligase

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000007739, Bottlenosed dolphin)

Protein Percentage 95.97%
cDNA percentage 94.93%
Ka/Ks Ratio 0.02414 (Ka = 0.0025, Ks = 0.1043)

TRAF7ENSBTAG00000019073 (Cow)

Gene Details

E3 ubiquitin-protein ligase TRAF7

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000025393, Cow)

Protein Percentage 98.8%
cDNA percentage 94.32%
Ka/Ks Ratio 0.01113 (Ka = 0.0054, Ks = 0.4815)

Additional orthologs identified in other species via the OPTIC pipeline.

TRAF7 (Human)   Traf7 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 2097 bp    Location:213487..230122   Strand:+
Raw sequence 
>bmy_02711
ATGAGCTCGGGCAAGAGCGCCCGCTACAACCGCTTCTCCGGGGGGCCTAGCAACCTTCCTACCCCAGACGCCGCCACCGGGACCAGAATGGAAACGACCTTCGGGCCCGCCTTTTCGGCTGTCACCACCATCACAAAAGCCGATGGGACGAGCACATACAAACAGCACCGCAGGACGCCCTCTTCCTCCAGCTCCCTCGCCTACTCCCCGCGGGACGAGGAGGACAGCATGCCCCCCATCAGCACCCCGCGCCGCTCTGACTCGGCCATCTCTGTCCGCTCCCTGCACTCGGAGTCCAGCATGTCCCTGCGCTCCACGTTCTCTCTGCCCGAGGAGGAGGAGGAGCCGGAGCCGCTGGTGTTTGCCGAGCAGCCCTCGGTGAAGCTCTGCTGCCAGCTCTGCTGCAGTGTGTTCAAGGACCCTGTGATCACCACGTGTGGGCACACCTTCTGTCGAAGATGCGCCTTGAAGTCAGAGAAGTGTCCCGTGGACAATGCCAAGCTGACGGTGGTGGTGAACAACATCGCGGTGGCTGAGCAGATTGGCGAGCTCTTCATCCACTGCAGGCACGGTTGTCGGGCAGTGGGGGGCGGGAAGCCCACTGTCTTTGAGGTGGACCCCCGAGGGTGTCCCTTCACCATCAAGCTCAGCGCCCGGAAGGACCACGAGGGCAGCTGTGACTACAGGCCTGTGCGGTGCCCCAACAACCCCAGCTGCCCGCCCCTTCTCAAGATGAACTTGGAGGCACACCTCAAGGAGTGCGAGCACATCAAGTGTCCCCACTCCAAGTACGGGTGCACGTTCATCGGAAACCAGGACACGTATGAGACGCACTTGGAGACCTGCCGCTTCGAGGGCCTGAAGGAGTTCCTGCAGCAGACGGATGACCGCTTCCACGAGATGCACGTGGCGCTGGCCCAGAAGGACCAGGAGATCGCCTTCCTGCGCTCCATGCTGGGCAAGCTCTCAGAGAAGATCGACCAGCTGGAGAAGAGCCTGGAGCTCAAGTTCGATGTCCTGGATGAAAACCAGAGCAAGCTCAGCGAGGACCTCATGGAGTTCCGGAGGGACGCGTCCATGTTGAATGACGAGCTGTCCCACATCAATGCACGGCTGAATATGGGCATCCTAGGATCCTACGACCCGCAGCAGATCTTCAAGTGCAAAGGAACTTTTGTGGGTCACCAGGGCCCCGTCTGGTGTCTCTGCGTCTACTCAATGGGGGACCTGCTCTTCAGCGGCTCCTCTGACAAGACCATCAAGGTGTGGGACACGTGTACCACCTACAAGTGTCAGAAGACGCTGGAGGGCCATGATGGCATTGTGCTGGCACTCTGCATCCAGGGGTGCAAGCTTTACAGCGGCTCAGCCGACTGCACCATCATCGTTTGGGACATCCAGAACCTGCAGAAGGTGAACACGATCCGGGCCCACGACAACCCGGTGTGCACGCTGGTCTCCTCACACAACATGCTCTTCAGCGGCTCCCTGAAGGCCATCAAGGTGTGGGACATTGTGGGCACCGAGCTGAAGCTGAAGAAGGAGCTCACCGGCCTCAACCACTGGGTGCGGGCCCTGGTGGCCGCCCAGAGCTACCTGTACAGCGGCTCCTACCAGACAATCAAGATCTGGGACATCCGGACCCTCGACTGCATCCACGTCCTGCAGACATCTGGCGGCAGCGTCTACTCTATTGCCGTGACGAATCACCACATTGTCTGTGGCACCTACGAGAACCTCATCCACGTGTGGGACATTGAGTCTAAGGAGCAGGTGCGGACCCTGACAGGACACGTTGGCACTGTGTACGCCCTGGCGGTCATCTCAACGCCAGACCAGACCAAAGTCTTCAGCGCATCCTACGACCGGTCTCTCAGGGTCTGGAGTATGGACAACATGATCTGCACGCAGACTCTGCTGCGTCACCAGGGCAGTGTGACTGCGCTGGCTGTGTCCCGGGGCCGGCTCTTCTCAGGAGCCGTGGACAGCACCGTGAAGACTGTATATAAATTTGATTACTTCCTGATTGAAATAAAAGCTGCACAGACTGTGGCTTTGAGTGGGGATGGTCCTCAGGGGGAGGAAGAGGCCACCTGA

Related Sequences

bmy_02711T0 SequenceType object (3)

Length: 699 aa      View alignments
>bmy_02711T0
MSSGKSARYNRFSGGPSNLPTPDAATGTRMETTFGPAFSAVTTITKADGTSTYKQHRRTPSSSSSLAYSPRDEEDSMPPISTPRRSDSAISVRSLHSESSMSLRSTFSLPEEEEEPEPLVFAEQPSVKLCCQLCCSVFKDPVITTCGHTFCRRCALKSEKCPVDNAKLTVVVNNIAVAEQIGELFIHCRHGCRAVGGGKPTVFEVDPRGCPFTIKLSARKDHEGSCDYRPVRCPNNPSCPPLLKMNLEAHLKECEHIKCPHSKYGCTFIGNQDTYETHLETCRFEGLKEFLQQTDDRFHEMHVALAQKDQEIAFLRSMLGKLSEKIDQLEKSLELKFDVLDENQSKLSEDLMEFRRDASMLNDELSHINARLNMGILGSYDPQQIFKCKGTFVGHQGPVWCLCVYSMGDLLFSGSSDKTIKVWDTCTTYKCQKTLEGHDGIVLALCIQGCKLYSGSADCTIIVWDIQNLQKVNTIRAHDNPVCTLVSSHNMLFSGSLKAIKVWDIVGTELKLKKELTGLNHWVRALVAAQSYLYSGSYQTIKIWDIRTLDCIHVLQTSGGSVYSIAVTNHHIVCGTYENLIHVWDIESKEQVRTLTGHVGTVYALAVISTPDQTKVFSASYDRSLRVWSMDNMICTQTLLRHQGSVTALAVSRGRLFSGAVDSTVKTVYKFDYFLIEIKAAQTVALSGDGPQGEEEAT*