Sequence detailsbmy_02720 (Coding sequence)

Part of scaffold_77 (SequenceType object (1))

For more information consult the page for scaffold_77 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

ABCA3ENSTTRG00000008223 (Bottlenosed dolphin)

Gene Details

ATP-binding cassette, sub-family A (ABC1), member 3

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000007787, Bottlenosed dolphin)

Protein Percentage 89.48%
cDNA percentage 89.56%
Ka/Ks Ratio 0.20111 (Ka = 0.0254, Ks = 0.1261)

ABCA3ENSBTAG00000014903 (Cow)

Gene Details

ATP-binding cassette sub-family A member 3

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000019840, Cow)

Protein Percentage 93.96%
cDNA percentage 91.67%
Ka/Ks Ratio 0.05432 (Ka = 0.0268, Ks = 0.4931)

Additional orthologs identified in other species via the OPTIC pipeline.

ABCA3 (Human)   Abca3 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 4971 bp    Location:356839..312004   Strand:-
Raw sequence 
>bmy_02720
ATGGCGGTGCTCAGGCAGCTGGCGCTCCTGCTCTGGAAGAACTACACTTTGCAGAAGCGGAAGGTCTTGGTGACCATCTTGGAGCTCTTCCTGCCCTTGCTGTTTTCCGGGATCCTGATTTGGCTTCGCCTGAAGATCCAGTCAGAGAACGTGCCCAATGCCACCCTCTACCCTGGCCAGTCCATCCGGGAGCTGCCACTGTTCTTCAGCTTCCCTCCACCGGGAGCCACCTGGGAGCTCGCCTACGTCCCATCCCAGAGTGACGCCGTGAGGACCGTCGTGGAGACGGTGAGGAAGACGCTGGTGATCAACATGAGAGCTCGCGGCTTCCCCTCCGAAAAGGACTTTGAGGACTACGTCAGGTACGACAACCGCTCCGCCAACGTGCTGGCCGCCGTGGTGTTCGAGCATGCCTTCAACCACAGCAGGGATCCCCTGCCGCTGGCGGTGAAATATCACTTACGGTTCAGTTACACGCGAAGAAATTACATGTGGACCCAGACAGGCTCCTTTTTCCTGAAAGAGACAGAAGGCTGGCACACCACTTCCCTTTTTCCACTCTTCCCCAGCCCAGGACCAAGGGAACCCACGTCCCCTGACGGTGGAGAACCTGGGTATATCCGTGAGGGCTTCCTGGCCGTGCAGCATGCCGTGGACAGGGCTGTCATGCAGTACCACGCCAACGCCTCCACGCACCAGCTGTTTGAGAAGCTCACCGTGATCGCCAAGAGGTTCCCTTACCCGCCTTTTATCTCGGACCCCTTCCTCGTCGCCATCCAGTACCAGCTTCCCCTGCTGCTCATGCTGAGCTTCACTTACACCTCACTCAGCATCATCCAGGCTGTCGTGCAGGAGAAAGAGAGGAAACTGAAGGAGTACATGCGCATGATGGGGCTCAGCAGCTGGCTGCACTGGACTGCGTGGTTCCTCCTGTTCTTCCTCTTCCTCCTCGTCACTGTCTCCTTCATGACCCTGCTCTTCTGCATCAAGGTGAAGAAGAACGTGGCAGTGCTCGCGCAAAGTGACCCCTCGCTGGTGCTGGTCTTTCTGGCCTGCTTTGCTGTCTCCTCCATCTCCTTCAGCTTCATGGTCAGCACTTTCTTCAGCAAAGCCAACATGGCAGCAGCCATCGGGGGCTTCCTCTACTTCTTCACGTACATCCCTTACTTCTTCGTTGCCCCTCGATACAACTGGATGACGCTTAGCCAGAAGCTATTCTCCTGCCTCCTGTCCAATGTTGCCATGGCAATGGGAGCCCAGCTCATAGGAAAATTTGAAGCAAAAGGCCAGTTCGGCGTGCCCCAGCCCTGGTATTTCTTCATCCTGCCCTCGTATTGGTGCGGGCACCCGAGGACAGTTCTAGGGAAAGAGGAGGAAGACGACGACCCTGAGAAAGTGCTTAGGACCGAGTACTTTGAAGCTGAGCCAGAGGACCTGGTAGCCGGGATCAAGATCAAGCATGTGTCCAAGGTGTTCAGAGTGGGGAACAAGGGCAAGGCAGCTGTCAGAGACCTGAACCTGAACCTGTATGAGGGCCAGATCACTGTCCTGCTGGGCCACAACGGCGCGGGGAAGACCACCACCCTCTCCATGCTCACCGGTCTCTTTCCCCCGACCAGTGGACGGGCGTATATCAGTGGGTACGAAATCTCCCAAGACATGGCTCAGATCCGGAAGAGCTTGGGCCTGTGCCCGCAGCATGACGTCTTGTTTGACAACCTGACTGTTGCAGAACACCTGTATTTCTATGCTCAGCTGAAAGGCTTGTCGCGCCAGAAGTGCCCTGAAGAAGTCAAACGCATGCTGCACATCCTCAGTCTGGAGGACAAGCGGGACTCCCGGAGCAGGTTCCTGAGCGGGGGAATGAGGCGCAAGCTCTCTATCGGCATTGCCCTCATCGCAGGCTCCAAGGTGCTGATGCTGGACGAGCCCACCTCGGGCATGGACGCCATCTCCAGGAGGGCCATCTGGGACCTTCTTCAGCAGCACAAAAGTGACCACACCATCCTGCTGACCACCCACTTCATGGATGAGGCCGACCTACTGGGGGACCGCATCGCCATCATGGCCAAGGGAGAGCTGCAGTGCTGCGGATCATCTCTGTTCCTGAAGCAGAAATATGGCGCAGGCTACCACATGACGCTGGTGAAGGAGCCTCACTGCAACCCCGAGGGCATCTCCCGGCTGGTCCACCACCATGTCCCCAACGCCACCCTGGAGAGCAGTGCCGGAGCAGAGCTGTCGTTCATTCTTCCCAAGGAGAGCACACACAGGTTTGAAAGTCTTTTTGCTAAACTGGAGAAGAAGCAGAAGGAGCTGGGCATCGCCAGCTTCGGGGCCTCTGTCACCACCATGGAGGAAGTCTTCCTGCGGGTCGGTAAGCTGGTGGACACCAGCATGGACATCCAAGCCATCCAGCTCCCTGCCCTGCAGTACCAGCACGAGAGGCGGGCAAGCGACTGGGCCGTGGACAGCCACCTGTGCGGGACGATGGACCCAACTGACGGCGTCGGCACCCTGATCGAGGAGAACACTGCCGTCAGGCTCAACACTGGGCTGGCCCTCCACTGCCAGCAGTTCTGGGCCATGTTCCTGAAGAAGGCCGCATACAGCTGGCGGGAGTGGAAGATGGTAGCGGCCCAGGTCCTGGTCCCTCTGACATGCATCACCCTGGCCCTCCTGGCCATCAACTACTCCTCCGAGATCTTCGATGACCCCCTCCTGAAGCTGACCTTGGCCGAGTATGGCAGAACCATCGTGCCCTTCTCAATTCCCGGGACCTCTCGGCTGGATCAGCAGCTGTCAGAGCATTTGAAAGACATGCTGCAGGCTGAGGGCCAGGAACCTCGAGAGGTGCTGGGTGACCTGGAGGAGTTCCTGATTTTCAGGGCCTCGGTGGAGGGGGGCGGCTTTAACGAGCGGTGCCTGGTGGCGGCATCCTTCAGAGACGTGGGCGAGCGCACGGTTGTCACTGCCCTGTTCAACAACCAGGCGTACCACTCGCCGGCCACCGCGCTGGCCATCGTGGACAACCTTCTGTTCAAGCTGCTGTGCGGCCCTCAGGCCTCCATCACAGTCTCCAACTACCCTCAGCCCCGGAGTGCCCTGCAGGCCGCCAAGGATCAGTTCAACGAGAGCCGGAAGGGATTCGACATCGCCCTCAACTTGCTCTTCGCCATGGCGTTCTTGTCCAGCACATTCTCCATCCTGGCGGTCAGCGAGAGGGCCGTCCAGGCCAAGCACGTGCAGTTTGTGAGCGGAGTCCACGTGGCTACTTTCTGGCTCTCGGCTCTGCTGTGGGACCTCATGTCCTTCCTCGTCCCCAGTCTGCTGCTGCTGGTGGTGTTCAAAGCCTTCGACGTGCACGCCTTCGCGCAGGACGGCCACGTGGCCGACGCCCTGCTGCTGCTCATGCTCTATGGCTGGGCCATCATCCCCCTCATGTACCTGATGAGCTTCTTTTTCTCGGGGGCGGCCACTGCCTACACGAGGCTGACCATATTCAACATCTTGTCGGGCATCGCCACTTTCCTCATGGTCACCATCATGCGCATCCCAGCGGTCAAGTTAGAAGAACTTTCCAGAACCCTGGACCGCGTGTTCCTGGTGCTGCCCAACCACTGTTTGGGGATGGCAGTCAGCAGTTTCTACGAGAACTACGAGACAAGGAGGTACTGCACCTCCTCCGAGGTGGCAGCCCACTACTGCCGGAAACACAACATCCAGTACCAGGAGAACTTCTATGCATGGAGCGCTCCGGGGGTTGGCAGGTTCGTGACCTCCATGGCCACCTCAGGGTTTGCCTACCTCACCCTGCTGTTCCTCATTGAGACCGATCTGCTGTGGAGGCTGAAGGCCTGCCTGTGTGCCTTCCGGAGGAGGCGAGCGCTGACAGAAGTGTACACCCGGACGTCAGCGCTTCCTGAAGACCAGGACGTGGTGGATGAAAGGAACCGCATCCTGGCCCCCAGCCTGGACTCCCTGCTGGACACGCCTCTGATTATCAAGGAGCTCTCCAAGGTGTATGAGCAGCGGGCGCCCCTCCTCGCCGTGGACAAGGTCTCCCTCGCAGTCCAGAAAGGGGAGTGCTTTGGCCTGCTGGGTTTCAACGGAGCCGGCAAAACCACGACTTTCAAAATGCTGACTGGGGAGGAGACCATTACTTCTGGGGACGCCTTTGTTGGGGGCTACAGCATCAGCTCTGACATCGGGAAGATGCGGCAGCGGATTGGCTACTGCCCCCAGTTTGATGCCCTGCTGGACCACATGACGGGCCGGGAGACACTGGTCATGTACGCCCGGCTCCGGGGCGTCCCCGAGTGCTACATCGGCGCCTGCGTGGAGAACACGCTGCGGGGCCTGCTCCTGGAGCCGCACGCCAACAAGCTGGTCAGGACGTACAGCGGCGGCAACAAGCGGAAGCTCAGCACCGGCATTGCCCTGCTTGGAGAGCCAGCAGTCATCTTCCTGGACGAGCCGTCCACTGGCATGGACCCCGTGGCCCGGCGCCTGCTCTGGGACACCGTGGCAAGGGCCCGCGAGTCCGGAAAGGCCATCGTCATCACCTCCCACAGCATGGAGGAGTGTGAGGCCTTGTGCACCCGGCTGGCCATCATGGTGCAGGGTCAGTTCAAGTGCCTGGGCAGCCCACAGCACCTCAAGAGCAAGTTTGGCAGTGGCTACTCCCTACGGGCCAAGATCCGGAGCGACAGGCAGCAGGAAGCCCTGGAAGAGTTCAAGGCATTCGTGGACCTGACCTTCCCAGGCAGCATCCTGGAAGATGAGCACCAAGGGATGGTCCATTACCACCTGCCTGGCAATGACCTCAGCTGGGCAAAGGTGTTTGGTGTTCTGGAGAAGGCCAAGGAGAAGTATGGCATGGACGACTACTCTGTGAGCCAGATCTCGCTGGAGCAGGTCTTCCTGAGCTTCGCCCACCTGCAGCCACCTGTCGAGGATGAGGGGCCGTGA

Related Sequences

bmy_02720T0 SequenceType object (3)

Length: 1657 aa      View alignments
>bmy_02720T0
MAVLRQLALLLWKNYTLQKRKVLVTILELFLPLLFSGILIWLRLKIQSENVPNATLYPGQSIRELPLFFSFPPPGATWELAYVPSQSDAVRTVVETVRKTLVINMRARGFPSEKDFEDYVRYDNRSANVLAAVVFEHAFNHSRDPLPLAVKYHLRFSYTRRNYMWTQTGSFFLKETEGWHTTSLFPLFPSPGPREPTSPDGGEPGYIREGFLAVQHAVDRAVMQYHANASTHQLFEKLTVIAKRFPYPPFISDPFLVAIQYQLPLLLMLSFTYTSLSIIQAVVQEKERKLKEYMRMMGLSSWLHWTAWFLLFFLFLLVTVSFMTLLFCIKVKKNVAVLAQSDPSLVLVFLACFAVSSISFSFMVSTFFSKANMAAAIGGFLYFFTYIPYFFVAPRYNWMTLSQKLFSCLLSNVAMAMGAQLIGKFEAKGQFGVPQPWYFFILPSYWCGHPRTVLGKEEEDDDPEKVLRTEYFEAEPEDLVAGIKIKHVSKVFRVGNKGKAAVRDLNLNLYEGQITVLLGHNGAGKTTTLSMLTGLFPPTSGRAYISGYEISQDMAQIRKSLGLCPQHDVLFDNLTVAEHLYFYAQLKGLSRQKCPEEVKRMLHILSLEDKRDSRSRFLSGGMRRKLSIGIALIAGSKVLMLDEPTSGMDAISRRAIWDLLQQHKSDHTILLTTHFMDEADLLGDRIAIMAKGELQCCGSSLFLKQKYGAGYHMTLVKEPHCNPEGISRLVHHHVPNATLESSAGAELSFILPKESTHRFESLFAKLEKKQKELGIASFGASVTTMEEVFLRVGKLVDTSMDIQAIQLPALQYQHERRASDWAVDSHLCGTMDPTDGVGTLIEENTAVRLNTGLALHCQQFWAMFLKKAAYSWREWKMVAAQVLVPLTCITLALLAINYSSEIFDDPLLKLTLAEYGRTIVPFSIPGTSRLDQQLSEHLKDMLQAEGQEPREVLGDLEEFLIFRASVEGGGFNERCLVAASFRDVGERTVVTALFNNQAYHSPATALAIVDNLLFKLLCGPQASITVSNYPQPRSALQAAKDQFNESRKGFDIALNLLFAMAFLSSTFSILAVSERAVQAKHVQFVSGVHVATFWLSALLWDLMSFLVPSLLLLVVFKAFDVHAFAQDGHVADALLLLMLYGWAIIPLMYLMSFFFSGAATAYTRLTIFNILSGIATFLMVTIMRIPAVKLEELSRTLDRVFLVLPNHCLGMAVSSFYENYETRRYCTSSEVAAHYCRKHNIQYQENFYAWSAPGVGRFVTSMATSGFAYLTLLFLIETDLLWRLKACLCAFRRRRALTEVYTRTSALPEDQDVVDERNRILAPSLDSLLDTPLIIKELSKVYEQRAPLLAVDKVSLAVQKGECFGLLGFNGAGKTTTFKMLTGEETITSGDAFVGGYSISSDIGKMRQRIGYCPQFDALLDHMTGRETLVMYARLRGVPECYIGACVENTLRGLLLEPHANKLVRTYSGGNKRKLSTGIALLGEPAVIFLDEPSTGMDPVARRLLWDTVARARESGKAIVITSHSMEECEALCTRLAIMVQGQFKCLGSPQHLKSKFGSGYSLRAKIRSDRQQEALEEFKAFVDLTFPGSILEDEHQGMVHYHLPGNDLSWAKVFGVLEKAKEKYGMDDYSVSQISLEQVFLSFAHLQPPVEDEGP*