Part of scaffold_77 (Scaffold)

For more information consult the page for scaffold_77 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CLDN6 ENSTTRG00000011213 (Bottlenosed dolphin)

Gene Details

claudin 6

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000010632, Bottlenosed dolphin)

Protein Percentage 99.55%
cDNA percentage 98.19%
Ka/Ks Ratio 0.02552 (Ka = 0.002, Ks = 0.0784)

CLDN6 ENSBTAG00000045901 (Cow)

Gene Details

claudin-6

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000055297, Cow)

Protein Percentage 96.38%
cDNA percentage 94.12%
Ka/Ks Ratio 0.05629 (Ka = 0.016, Ks = 0.2847)

CLDN6  (Minke Whale)

Gene Details

claudin 6

External Links

Gene match (Identifier: BACU009184, Minke Whale)

Protein Percentage 96.62%
cDNA percentage 97.33%
Ka/Ks Ratio 0.32103 (Ka = 0.0191, Ks = 0.0594)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 717 bp    Location:918146..915167   Strand:-
>bmy_02746
ATGCAGATCTGGCCCTGCCTTCTCGTGCAGCTCCTCAACCTCAACCTCGCCATGGCCTCCACTGGTCTGCAGATCCTGGGGATCGTCCTGACGCTGCTTGGCTGGGTGAATGCCCTGGTGTCCTGCGCCCTACCCCTGTGGAAGGTGACCGCCTTCATCGGCAACAGCATTGTGGTGGCCCAGGTGGTGTGGGAGGGGCTGTGGATGTCCTGCGTGGTGCAGAGCACCGGCCAGATGCAGTGCAAGGTGTACGACTCGCTGCTGGCGCTGCCCCAGGACCTGCAGGCTGCCCGAGCCCTCTGTGTCATCACTCTCCTAGTGGTCCTGCTCGGCCTGCTGGTCTACCTCGCAGGGGCCAAGTGCACCACCTGTGTGGAGGACAAGGACTCCAAGGCCCGTCTGGTGCTCATCTCTGGGATCATCTTTGTCATCTCCGGAGTCCTGACCCTGATCCCCGTGTGCTGGACGGCCCACACCATCATCCAGGACTTCTACAACCCCCTGGTGGCCGAGGCCCAAAAGCGGGAGCTGGGAGCCTCCCTCTACCTGGGCTGGGCAGCTTCTGGCCTTTTGTTGCTGGGTGGGGGGCTACTGTGCTGCACCTGCCCCTCTGGGGGGTCCCGGGGCTCCAGCCATTATATGGCCCGATACTCGGCATCAGCCCCGCATACTGCCTCTCGGGGTCCCTCTGAGTACCCCACTAAGAATTACGTCTAA

Related Sequences

bmy_02746T0 Protein

Length: 239 aa      View alignments
>bmy_02746T0
MQIWPCLLVQLLNLNLAMASTGLQILGIVLTLLGWVNALVSCALPLWKVTAFIGNSIVVAQVVWEGLWMSCVVQSTGQMQCKVYDSLLALPQDLQAARALCVITLLVVLLGLLVYLAGAKCTTCVEDKDSKARLVLISGIIFVISGVLTLIPVCWTAHTIIQDFYNPLVAEAQKRELGASLYLGWAASGLLLLGGGLLCCTCPSGGSRGSSHYMARYSASAPHTASRGPSEYPTKNYV*