Part of scaffold_77 (Scaffold)

For more information consult the page for scaffold_77 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

MMP25 ENSTTRG00000004017 (Bottlenosed dolphin)

Gene Details

matrix metallopeptidase 25

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000003775, Bottlenosed dolphin)

Protein Percentage 97.15%
cDNA percentage 97.97%
Ka/Ks Ratio 0.20777 (Ka = 0.0121, Ks = 0.0581)

MMP25 ENSBTAG00000016424 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000021843, Cow)

Protein Percentage 93.28%
cDNA percentage 91.04%
Ka/Ks Ratio 0.0717 (Ka = 0.0342, Ks = 0.477)

MMP25  (Minke Whale)

Gene Details

matrix metallopeptidase 25

External Links

Gene match (Identifier: BACU009180, Minke Whale)

Protein Percentage 98.36%
cDNA percentage 98.7%
Ka/Ks Ratio 0.20721 (Ka = 0.0077, Ks = 0.0373)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1479 bp    Location:947927..957263   Strand:+
>bmy_02751
ATGCTCCGGCTCCTGGCGCTGTTGCTCCCGCTGCTGCCGCCGCCCGCGCGCGCCCGGGAGCCCTCCGCGCAGGACGTGAGCCTGGGCGTGGACTGGCTGACCCGCTATGGCTACCTGCCGCCACCTCACCCTGCCCAGGCCCAGCTGCAGAGCCCTGCAAAGCTTCGGGATGCGATCAAGGTCATGCAGAGGTTTGCGGGTCTGCCGGAGACAGGCGTCTTGGTGGCCACCATGCATAAGCCCCGCTGCTCCCTGCCTGATGTGCTGGGGGCGGCGGGGCTGGTCAGGCGGCGCCGCCGGTATGCTCTGAGTGGCAGCGTGTGGAAGAAGCGAACCCTGACGTGGAGGGTAAACTCCTTCCCCCAGGGCTCAGTGCTGAGCCAGGAGACAGTGCGGACCCTCATGCACCATGCCTTGACCACCTGGGGTGTTGAGTCAGGCCTCGAATTCCAGGAAGTGGGTTCTCAGGGCCTGATGGAGCCTGACATCCTCATCGACTTTGCGCGGGCCTATCACCAGGACAGTTACCCCTTCGACGGGCAGGGGGGCACCCTCGCCCATGCCTTCTTCCCTGGGGAGCACTCCATCTCTGGGGACACTCACTTCGATGATGAGGAGACCTGGACTTTTGGGTCAAAAGATGGCGAGGGGACGGACCTGTTTGCCGTGGCTGTTCATGAGTTTGGCCACGCCTTGGGCCTGGGCCACTCCTCAGCGCCCGACTCCATCATGAGGCCCTTTTACCAGGGCCCGGTGGGCAACCCCACCGAGTACCGCCTGTCCCAGGACGACCTCGAAGGCCTGCAACAGCTCTACGGCCCATGGTTCTGGCGCCTCCAGCCCTCGGGACAGCTGGTGTCCCCCCGGCCCGCCCGGCTCCACCGCTTCTGGGAGGGGCTGCCGGCCCAGGTGAAGGTCATCCAGGCCGCCTACGCCCGGCATCCGGACGGCCGGATCCTTCTCTTCAGCGGTCCGCAGTTCTGGGTGTTCCAGGACCGGCAGCTGGAGGGCGCCGCGCGGCCGCTCACGGAGCTGGGGCTGCCCCCGGGGGAGGAGGTGGACGCCGTGTTTTCTTGGCCGCTGAACGGGAAGACCTACCTGATCCGGGGCAGGCGGTACTGGCGGTACGACGAGGCGGCAGCGCGCCCGGACCCCGGCTACCCGCGCGACCTGAGCCTCTGGGAGGGGGCACCGCACGCCCCCGACGACGTCACCGTCAGCAACACAGGTGACACCTACTTCTTCAAGGGCGCCCACTACTGGCGCTTCCGCAAGGGCAGCGTCAAAGCCGAGCAGGACTCCCCCCAACCAATGGGCCCTAAGTTTCTGGACTGCCCCGCCCCCAGACCCCCCAAAGCGACCCTTAAGCCAGGAGCCTGCGACTGTCAGTGCGAGATCAGTCAGGCGGCAGGGCGGCCGTCCGTGCCCCCCTTGCTGTCCCTGCTGCCCCTGCTGGTGGGGGGCTTCGCCTCCCGCTGA

Related Sequences

bmy_02751T0 Protein

Length: 493 aa      View alignments
>bmy_02751T0
MLRLLALLLPLLPPPARAREPSAQDVSLGVDWLTRYGYLPPPHPAQAQLQSPAKLRDAIKVMQRFAGLPETGVLVATMHKPRCSLPDVLGAAGLVRRRRRYALSGSVWKKRTLTWRVNSFPQGSVLSQETVRTLMHHALTTWGVESGLEFQEVGSQGLMEPDILIDFARAYHQDSYPFDGQGGTLAHAFFPGEHSISGDTHFDDEETWTFGSKDGEGTDLFAVAVHEFGHALGLGHSSAPDSIMRPFYQGPVGNPTEYRLSQDDLEGLQQLYGPWFWRLQPSGQLVSPRPARLHRFWEGLPAQVKVIQAAYARHPDGRILLFSGPQFWVFQDRQLEGAARPLTELGLPPGEEVDAVFSWPLNGKTYLIRGRRYWRYDEAAARPDPGYPRDLSLWEGAPHAPDDVTVSNTGDTYFFKGAHYWRFRKGSVKAEQDSPQPMGPKFLDCPAPRPPKATLKPGACDCQCEISQAAGRPSVPPLLSLLPLLVGGFASR*