Part of scaffold_77 (Scaffold)

For more information consult the page for scaffold_77 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SLX4 ENSTTRG00000016987 (Bottlenosed dolphin)

Gene Details

SLX4 structure-specific endonuclease subunit

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000016105, Bottlenosed dolphin)

Protein Percentage 87.24%
cDNA percentage 89.01%
Ka/Ks Ratio 0.50765 (Ka = 0.0276, Ks = 0.0544)

SLX4 ENSBTAG00000004509 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000005923, Cow)

Protein Percentage 77.04%
cDNA percentage 84.35%
Ka/Ks Ratio 0.39777 (Ka = 0.1343, Ks = 0.3375)

SLX4  (Minke Whale)

Gene Details

SLX4 structure-specific endonuclease subunit

External Links

Gene match (Identifier: BACU009167, Minke Whale)

Protein Percentage 97.52%
cDNA percentage 98.52%
Ka/Ks Ratio 0.55145 (Ka = 0.0121, Ks = 0.0219)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 5334 bp    Location:1468974..1446746   Strand:-
>bmy_02775
ATGATGGATGAGTCAGACGATGACTTTAAGGAACTCTGTGCCAGCTTTTTCCAAAGGGTGAAAAAGAATGGCCCCAAGGAAGTGTCGGGGGAAAGGAAGACACAAAAGGCCTCAAACAGCACCCAGATAAGAAGCAAACTGAAAAGGACCAAACCAACTGCTTCCAAGAGCAAAACCCTTCAAGGCCCCACTGAGAGGAAAACTCGCTCTGGCAGCCAGGTCCTGCGGACTCAAAAGCAAGGGGCACCCAAGTGGCCAGAGAGTGAACCAGCTCCCCCTGAAAATGGGGAGGGAGGCGTGCATGCTTCTGCTGTGCTCCAAGACAGTGCATGGAGCACCCAGACAGAGGCTGCTCCTGACAGCTGCTCCCAGCCCCCTCCTTCCTGTCTGACTGCGATGGTGCCCAGTCCCTCCAAACCCCGGGCGGCAGAGCTGGTGCTACAGCGAATGCAGCAGTTCAAGAGAGCAGACCCCGAGCGTTTGAAACACGGTTCAGAAGGGTGCTCCCTAGAGGCTGCACTTGAAGAAAACGTCCCAAAGGGCCCTCAAGAGATGATGGCGGGGAACGGGTCTGGGCCCAGGCTCCCTGCCACAGAGAGCGACGCTGCAGTGGCCTTGGCCCTCCAGCACGAGTTTGGGCCAGAACGGGCATCCGCACACAACGACAGCCTGGAGGAGAAGGGGTTGTTCTTTTGCCAGATCTGTCAAAAAAACCTCTCAGCTATGACCGTGACACGGAGGGAGCAGCACGTGAACCGGTGCTTGGACGAGGCTGAAAAGGCACTGAGACCTTCCGTGCCTCAGATCCCTGAATGCCCAATTTGCGGCAAGCCATTTCTCACCCCTAAGAGCAGAATCAGTCACTTGAAACAGTGTGCGGTGAAGATGGAGGTTGGCCCGCAGCTCCTGCTCCAGGCCGTGCGGCTGCAGACAGCTCAGCCCGAGGGGGCCTCTGGCACACTGGCATCGAGCCTCAGGGATCACGCTGGAGGTCTGAAGCGGAAGGGAGCCACTGCCAAGAAGGAGCCGCAGAAGAGGCGGAAGGTCGCCAAGCCCGAGGCGCCGTCCGAGGACCTGCTGGTGGCCATGGCTCTGTCCCGGTCCGAGATGGAGCAGGAGGCTGTGCCGGCGGCACTCAGGCTGGGAAACGCTTTTTCTGGGAGGACGAGACCGGGAGCAGCTCTGGAGAAGAAAAGTCGCAAGAAGAAAGCCCCCGTTACGCCCCCGCAGTTGTTAGTCCAGGACGCGGAGACCACAGGGAGACAGATGGAGGATCGCGTGGCCCAGCTCTTGGCAGAGGAGCTGGAGCTGTCTGGCACGCCACCGCTTCCTGCGAGCAGAATTTTTAAGGAAGAGCTGGAAAAGGGCAGGCGAGGTCTTCGACCACCTGGAGGAAAGCAGAACTTTCTGTGGGAGGGCAGCGCCCTGACCGGGGCCTGGGCTCTGGAATCCTTCTACACGGCCAGCCTGGTCCCTCCCCTGGTGCCCCAGCGGCCCACCGAGGGCCTCACACAGGAGCCCACGCTGCCACTGGAGCTGCCTGAGAAGCCAGAGCCTGGCGTGCAAACACCCCTTGCCGTCCATGGCACCCGCCCTGTGGGGCACAGCCCCCTGAGCCCAGCGCCCTCCGCCAGCCAGAGGGAGCATCAGGCCCTGCAGGACCTCCTGGACCTGGCAGGAGAGGGGCTGAGCGCCAGCCCGTGGCCCTGCAGCGGGGGCCCGGCCGGCTCAGGAGGGGCCACAGGAATGGACTTGTCGCCCAGCAGCCTTCCACTGACTGGGTTTGTCCTGCCAGCCAAGGAGAAGTGCCTGGAGAGGAGCAGCCAGGCTTCGCTCGCCCTCGGTTTGCTGGTGGCCGACTTCGGTGCCATGGTCAACAACCCACACCTCAGCGACGTCCAGTTTCAGATGGACGGCGGGGAGGTGCTTTATGCCCACAAGTTTGTGCTCTATGCCCGATGCCCACTTCTCATGCAGCACGTAAACAGTGAAGGCTTCTTTGCAATAGAAGATGGTGACATGAGGACCCAGCGCGTTCTGCTGAGTGACGTCAGCACTGAGGCYGCCCGGATGTTCCTGCGTTACCTCTATGCTGCGGACACTGCCCTTACTCCCCAGCTGGCCCCTGACCTGAGCTCTCTGGCCCACAGGTTTGGTGTGACTGAGCTTGTTCACCTGTGCGAACAGGTGCCTGTCCTGATGGATGCCGAGGGTGGACAGCAGAAGGAGCAGGAAGACGAGGATTGTGAAAGCAGAGTGGAGACTTTCCAAGAACTCCTGCGGTCAGTGTGGCGGGGGGAGGAGGAGGAAGCAGAGGCTCTGCCGAAATCCGAGGGCCGAGAAGAAGACAGAGAAAAGGTGAATGAGGCAGAGATGGAAGAAATTTATGAATTTGCAGCTACTCAGCGAAAGCTGCTCCAGGGGGAGAAAGCTCCAGCGATGGAGGAAGAAACTGACCAGCTCAGGGAGGACGGTCCAGTTTCTGGGAGAATCCTCACAAGCGTTCGCAATAAAGAACAGTCAGAAAATGCAGAGCAGATGGAATCATCTGGGCAAGGAAGAGATGAGGCCCCAGACAAATGGAAAAACATGAGACACTCCACGCTCCTGCCCCCCGGGGACCAGGGTTTGGACAGGGAGGAGAAAGCGGAGTCCCCAAAGGAAGCACTGGCTCTTCCCTACTCTTCCAGCCCTGCCCGGGCTCGGGCAGAGAAGCAGGAAAGCACCTTTTTGTGCTCAGTTGATGTTGATGATGATGAACAGTCCTTTTCATCGCCTCAAGCCGGATACCCTGAACCCTCCCAGATGACAAGTGATCGCAAGGAAGGAAACTGCACCATATGGGAAAGGGAGATAGAGAGTTCCCATCCCCCTGCTCACCAGCAGGCACCTCCCTCACACTCACCCTTCTTCCCATCACATCCCCATCAAGGCAGGAGTCCCTGCCAGCCACATCTTCGTTCTCGTCACACCAGTGACCTGTCCCTGCCAACACCCCAGCTGCAGGGCACGGCTTCCAGGGTAGCCTCCCAGAACTCATCACCAAAGCCAAAGAGGGCCAGAAGCCTTCCCATGTCACGTAAGGATCCAGGCCAGAAAGACAAGGAATGTAGTTCCATGTTGGAACACAGAGGTAAAGGGGTCCTGATCTCCCCAAAAAAGTCTCCACCCATGGATCTAACCCAGTCAGAACCTGGCTGCTTGAGTGCCAGGTCTCAGAACTCTCCATCCAGCGTGAACAGAGAAGATGAGGTGATCCTTTTATTGGATTCAGATGAAGAGCTGGAGCTGGAACAAATCAAAATAAAGTCAGTTTTGAATGGTCCCTCGGAAGAAAGGAAAGTTCTTGAAGTTAGCACCAAGTCCTCTGAGCTGTTTTCCATCATCGACCTCGATGCGGAGCAGGAACCTTCCCAAAGCCCACCAGGAAGAGAGCCCACGCTACAGCAGGAGGTGGAGGGACCGCTGGGGAACCGGGGCTCTGTTGGGGGCAGAGGGACCCCCCAGCTGTTCTGCGACCCCAAGATCAGTGGCGACGAGGACAGCACGACAGATACCTCGTGGCTGGTGCCCGCCACCCCACTGGCTAGCAGAAGCCGTGACTGTTCATCGCAGACCCAAATCACAGGCCTCAGGTCCAGGCCTTCAGCAGACCCACTGGCTCAGCCCAAGCCCAGGGCCCTGTTACAGAACAGGGACGAACCGGAAGCCATGAGTAAGTTTTCGGTCATCGTGCCTCAGACATCCTCACTCCTGGGCCCCATCTCTCCCGGAAGCCCTGACAGCAGAAGGCAGGTCTGCAGAAGCCCGTCCAGTCCCCACCCCAGATGCCACCAGTACTTTTCTCCTCTGGCTCCCCGTCCCAGCTCAGGAGGCCTTGCTGATCTCACTGGGCAGTTCCAGAGGCACCCACCGCCTGCGCTGAGCCCAGGGGTTCAGGCCACTGCGAGTGAAGTGGTGGAGGTTGAGGACAGTGAGGAGGAGCAGGAGGTGGCCTCCCGGAAGGCGAGCAACATCCCCCTGCCGGACAGTGACCCCCCGATGCCAGCCGACAATTGGTGTTGGCATGTGGAGCCCCTCTCACCAATTCCGATTGACCACCTGAACCTTGAGTGGACCGGCCCCCTGAGCACCAGTAGCCCTGGCGGTAGGGTGGAGGGGGCCCCGGACAGCGGTGACTGCTGCTCCCCAGCACTGCTGGGCACCACCCCCATCCGAGGAAGCCGCACTGGCCAGAGGAAGGCTCAAGAGGAATCCCCTGGGGCCGGCTCCCCTGGGAGCAGCAGGCTGAGCTTTCTGAACTCAGCTCTGTGGGACGATTGGGATGGAGAAGAACAGAAGTCCCCAGAGGCTCTTCCTCTGCCCCAGACACCGAGCGCGGATGGAGCCCAGAAATTGCAAGAGTTACAGACGCCAAAAGGTGCTAATCGGAAGAAGAACTTGCCCCCCGAAGTGCCCATAACCCCAATGCCAAGGTATTCCATCATGGAGACCCCGGTGCTGAAGAAAGAACTGGACAGGTTTGGGGTCCGCCCTCTGCCCAAACGCCAAATGGTCCTGAAACTGAAGGAGATATTCCAGTACACTCACCAGACACTGGAGTCAGACTCCGAGGAAGAGAGCCAGTCCTCACAGGTGCCCTTGGAGGCTCCTTGCAGCCAGACTTACACCACCAAGACCTCTAAGGCTTCAAGGGCAGCTGGCCGCACCCAGCTGGAGGCCACTTCTGGCCCCGTTCCCCAAAGGTCCAAGGGACCTGCTAAGACCAAGGGCCCCCAACATCAAAAGATGCAGCCTGGTGGAAGCATCCCTGCCCTGAGCACGTCACCAGCCAAGGAGGGGCCTCCAGGCCCTGATGGTGACACCCAGCTACCGGCCTCCCAGGAATCCATGGCCACCTCTGTAGACAGCAGTGACAGCTCCTGCAGCTCACAAAGTTCTTCCTGTGAGTTTGGAGCGGCCCTGGAGTCTGCAGGAGAAGATGAGGAGGACGAGGAGGGTGTCAGTGCTTCGCAGGCGGCCATCCAGGGAGCGGCCACAGAGGAGGCCGTGAGGCATTACATCTGCTCCAAGCCAGCCCTCTACCGCAAGGTCCTGCTGTACCAGCCCTTGGAGCTGGCAGAGCTACAGGCCGAGCTGAAGCAGCAAGGCATCCACGTGGCCACGGGGAAGCTGCTGGACTTCCTGGACACCCAGTGCATCACCTTCACCACAGCTGCCGCCCGCAAGGAGAAGCTTGAGAGGAAGAGACGGCAGCCCGTGGGCAAGAAGATGGGGGTCAGAATCCGCAGGCCTGTCCCCCGCCCCCAACCCCTGGCCATCAGCAGCCTGTGA

Related Sequences

bmy_02775T0 Protein

Length: 1778 aa      View alignments
>bmy_02775T0
MMDESDDDFKELCASFFQRVKKNGPKEVSGERKTQKASNSTQIRSKLKRTKPTASKSKTLQGPTERKTRSGSQVLRTQKQGAPKWPESEPAPPENGEGGVHASAVLQDSAWSTQTEAAPDSCSQPPPSCLTAMVPSPSKPRAAELVLQRMQQFKRADPERLKHGSEGCSLEAALEENVPKGPQEMMAGNGSGPRLPATESDAAVALALQHEFGPERASAHNDSLEEKGLFFCQICQKNLSAMTVTRREQHVNRCLDEAEKALRPSVPQIPECPICGKPFLTPKSRISHLKQCAVKMEVGPQLLLQAVRLQTAQPEGASGTLASSLRDHAGGLKRKGATAKKEPQKRRKVAKPEAPSEDLLVAMALSRSEMEQEAVPAALRLGNAFSGRTRPGAALEKKSRKKKAPVTPPQLLVQDAETTGRQMEDRVAQLLAEELELSGTPPLPASRIFKEELEKGRRGLRPPGGKQNFLWEGSALTGAWALESFYTASLVPPLVPQRPTEGLTQEPTLPLELPEKPEPGVQTPLAVHGTRPVGHSPLSPAPSASQREHQALQDLLDLAGEGLSASPWPCSGGPAGSGGATGMDLSPSSLPLTGFVLPAKEKCLERSSQASLALGLLVADFGAMVNNPHLSDVQFQMDGGEVLYAHKFVLYARCPLLMQHVNSEGFFAIEDGDMRTQRVLLSDVSTEAARMFLRYLYAADTALTPQLAPDLSSLAHRFGVTELVHLCEQVPVLMDAEGGQQKEQEDEDCESRVETFQELLRSVWRGEEEEAEALPKSEGREEDREKVNEAEMEEIYEFAATQRKLLQGEKAPAMEEETDQLREDGPVSGRILTSVRNKEQSENAEQMESSGQGRDEAPDKWKNMRHSTLLPPGDQGLDREEKAESPKEALALPYSSSPARARAEKQESTFLCSVDVDDDEQSFSSPQAGYPEPSQMTSDRKEGNCTIWEREIESSHPPAHQQAPPSHSPFFPSHPHQGRSPCQPHLRSRHTSDLSLPTPQLQGTASRVASQNSSPKPKRARSLPMSRKDPGQKDKECSSMLEHRGKGVLISPKKSPPMDLTQSEPGCLSARSQNSPSSVNREDEVILLLDSDEELELEQIKIKSVLNGPSEERKVLEVSTKSSELFSIIDLDAEQEPSQSPPGREPTLQQEVEGPLGNRGSVGGRGTPQLFCDPKISGDEDSTTDTSWLVPATPLASRSRDCSSQTQITGLRSRPSADPLAQPKPRALLQNRDEPEAMSKFSVIVPQTSSLLGPISPGSPDSRRQVCRSPSSPHPRCHQYFSPLAPRPSSGGLADLTGQFQRHPPPALSPGVQATASEVVEVEDSEEEQEVASRKASNIPLPDSDPPMPADNWCWHVEPLSPIPIDHLNLEWTGPLSTSSPGGRVEGAPDSGDCCSPALLGTTPIRGSRTGQRKAQEESPGAGSPGSSRLSFLNSALWDDWDGEEQKSPEALPLPQTPSADGAQKLQELQTPKGANRKKNLPPEVPITPMPRYSIMETPVLKKELDRFGVRPLPKRQMVLKLKEIFQYTHQTLESDSEEESQSSQVPLEAPCSQTYTTKTSKASRAAGRTQLEATSGPVPQRSKGPAKTKGPQHQKMQPGGSIPALSTSPAKEGPPGPDGDTQLPASQESMATSVDSSDSSCSSQSSSCEFGAALESAGEDEEDEEGVSASQAAIQGAATEEAVRHYICSKPALYRKVLLYQPLELAELQAELKQQGIHVATGKLLDFLDTQCITFTTAAARKEKLERKRRQPVGKKMGVRIRRPVPRPQPLAISSL*