Part of scaffold_77 (Scaffold)

For more information consult the page for scaffold_77 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TRAP1 ENSTTRG00000016990 (Bottlenosed dolphin)

Gene Details

TNF receptor-associated protein 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000016107, Bottlenosed dolphin)

Protein Percentage 93.59%
cDNA percentage 94.16%
Ka/Ks Ratio 0.2123 (Ka = 0.0106, Ks = 0.05)

TRAP1 ENSBTAG00000020109 (Cow)

Gene Details

Heat shock protein 75 kDa, mitochondrial

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000026786, Cow)

Protein Percentage 90.88%
cDNA percentage 91.07%
Ka/Ks Ratio 0.11474 (Ka = 0.0423, Ks = 0.3688)

TRAP1  (Minke Whale)

Gene Details

TNF receptor-associated protein 1

External Links

Gene match (Identifier: BACU020519, Minke Whale)

Protein Percentage 99.26%
cDNA percentage 98.72%
Ka/Ks Ratio 0.06939 (Ka = 0.0033, Ks = 0.0472)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 2109 bp    Location:1549738..1496887   Strand:-
>bmy_02778
ATGGCTCGCGAGCTGCGGACGCTGCTGATGTGGGGCTGCCGCCTGCGGGCCCCGGCGCTGGCGGTCGCCCGGGGAGGAAAACCAGTTCTGTGTCCTTGGAGGCCCCCAGCCCAGTCCTGGAGTCCCAGGCAAAGCCTGGCTTCAAGCTCCCACGTTGGACGACCGTTCAGCTCCCAGGCTGCTGAGGACCGGAAGGAGGAGCCCCTGCACTCCATCATCAGCAGCTCAGAGACCGTGCAGGGTTCTGTTTCCAAACATGAGTTCCAGGCTGAGACAAAGAAGCTTCTGGACATCGTTGCCCGTTCCTTGTACTCAGGAAAAGAGGTGTTCATACGGGAGCTGATCTCCAATGCTAGCGACGCCTTGGAAAAGCTGCGTCATAAGCTGGTGTCTGAAGGCCAGACGCTGCCAGAAATGGAGATTCACTTGCAGACTGACGCCGAGAAAGGCACCATCACGATCCAGGACACTGGCATCGGGATGACACAGGAGGAGCTGGTGTCCAACCTGGGAACCATTGCCAGGTCGGGGTCGAAGGCCTTTCTGGATGCGCTCCAGAGCCAGGCGGAGGCCAGCAGCAAGATCATTGGCCAGTTTGGAGTGGGTTTCTACTCGGCCTTCATGGTGGCTGACAGAGTCGAGGTCTATTCTCGCTCGGTGGACGCAGGCAGCCCTGGGTACCAGTGGCTTTCAGACGGCTCTGGGGTGTTTGAAATCGCCGAAGCCTCAGGAGTTAGAACCGGGACCAAAATCATCATCCACCTCAGGGCAGACAGCAGAGAGTTCACCAGCGAGGCTCGGGTTCGAGACGTGGTGACAAAGTACAGCAAATTTGTCAGCTTCCCCTTGTACCTGAACGGAAGGCGCATTAATACCCTGCAGGCCATCTGGATGATGGACCCCAAGGATGTGGGCGAGGGTCAGCACGAGGAATTCTACCGCTACATCGCTCAGGCCCATGACAAGCCCCGCTACACCCTGCACTACAAGACGGACGCACCTCTCAACATCCGCAGCCTCTTCTACGTGCCGGAAACGAAACCAACCATGTTTGACATGAGCCGGGAGCTGGGCTCCAGTGTCTCGCTGTACAGCCGCAAGGTCCTCATCCAGACCAAGGCCACCAACATCCTGCCCACGTGGCTGCGCTTCATTCGAGGTGTGGTGGACAGCGAGGACGTCCCCCTGAACCTCAGCCGGGAGCTCCTCCAGGAGAGCGCGCTGATCAGGAAACTCCAGGGCGTTCTACAGCAGAGGCTAATAAAATTCTTCATTGACCAGAGTAAAAAAGATGCTGAGAAATATGCCAAGTTTTTTGAAGATTACGGCTTGTTCATGAGGGAGGGCATCGTGACCACGGCTGAGCAGGAGGTCAAGGAGGATATCGCAAAGCTGCTGCGGTACGAGTCGTCAGCACTGCCTGCCGGGCAGCTGACCAGCCTCCCAGACTACGCCAGCCGCATGCAGGCTGGCACCCGCAGCATCTACTACCTGTGTGCCCCCAACCGGCACCTGGCGGAGCACTCGCCCTACTATGAGGCCATGAAGTGGAAAAACACAGAGGTTCTCTTCTGCTACGAGCAGTTTGATGAGCTGACCTTGCTCCACCTTCGTGAGTTTGACAAGAAGAAGCTGATGTCTGTGGAAACGGACATCGTTGTTGACCACTACAAGGAGGAGAAGTTTGAGGACAGCTCCCCAGCTGGCGACCGTCTGTCAGAGAAGGAGACAGAGGACCTGATGGCCTGGATGAGAAACGCGCTAGGGTCCCGTGTCACCAATGTGAAGGTTACTCTTCGGCTGGACACCCACCCTGCTATGATCACGGTGCTGGAGATGGGGGCCGCCCGGCACTTCCTGCGCATGCAGCAGCTGGCCAAGACCCAGGAGGAGCGTGCTCAGCTGCTGCAGCCTACGCTGGAGATCAACCCCAGGCACACACTCATCAAGAAGCTCAGTCAGCTGAGAGACAGCGAGCCTGACCTGGCCCAGCTGCTGGTGGATCAGATCTACGAGAATGCCATGATCACAGCAGGGCTCATCGACGACCCCCGACCCATGGTCAGCCGCCTGAACCACCTGCTCATCAAGGTCCTGGACCGACACTGA

Related Sequences

bmy_02778T0 Protein

Length: 703 aa      View alignments
>bmy_02778T0
MARELRTLLMWGCRLRAPALAVARGGKPVLCPWRPPAQSWSPRQSLASSSHVGRPFSSQAAEDRKEEPLHSIISSSETVQGSVSKHEFQAETKKLLDIVARSLYSGKEVFIRELISNASDALEKLRHKLVSEGQTLPEMEIHLQTDAEKGTITIQDTGIGMTQEELVSNLGTIARSGSKAFLDALQSQAEASSKIIGQFGVGFYSAFMVADRVEVYSRSVDAGSPGYQWLSDGSGVFEIAEASGVRTGTKIIIHLRADSREFTSEARVRDVVTKYSKFVSFPLYLNGRRINTLQAIWMMDPKDVGEGQHEEFYRYIAQAHDKPRYTLHYKTDAPLNIRSLFYVPETKPTMFDMSRELGSSVSLYSRKVLIQTKATNILPTWLRFIRGVVDSEDVPLNLSRELLQESALIRKLQGVLQQRLIKFFIDQSKKDAEKYAKFFEDYGLFMREGIVTTAEQEVKEDIAKLLRYESSALPAGQLTSLPDYASRMQAGTRSIYYLCAPNRHLAEHSPYYEAMKWKNTEVLFCYEQFDELTLLHLREFDKKKLMSVETDIVVDHYKEEKFEDSSPAGDRLSEKETEDLMAWMRNALGSRVTNVKVTLRLDTHPAMITVLEMGAARHFLRMQQLAKTQEERAQLLQPTLEINPRHTLIKKLSQLRDSEPDLAQLLVDQIYENAMITAGLIDDPRPMVSRLNHLLIKVLDRH*