Part of scaffold_78 (Scaffold)

For more information consult the page for scaffold_78 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

RBM20 ENSBTAG00000023891 (Cow)

Gene Details

probable RNA-binding protein 20

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000043544, Cow)

Protein Percentage 71.05%
cDNA percentage 76.36%
Ka/Ks Ratio 0.44992 (Ka = 0.2374, Ks = 0.5277)

RBM20  (Minke Whale)

Gene Details

RNA binding motif protein 20

External Links

Gene match (Identifier: BACU004640, Minke Whale)

Protein Percentage 76.83%
cDNA percentage 81.49%
Ka/Ks Ratio 0.65375 (Ka = 0.1975, Ks = 0.3022)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 2394 bp    Location:1274429..1311598   Strand:+
>bmy_02808
ATGAGGACTTCTCAGGCTTTGGCCAGCAGCAGCCGTGGAGCAAAAGGTGAAAAGGCCATCAGACCCAGCGGCCGAATTCTTCTGTACCGTGACAGCGTCTCCCAAGATGAACCCGACATTTGGAGGCATTGCTGTACACCCATTGGAGGTGAAGAGGTCTCATCTGACTGGTTTTATCATTACAAGCTCTGCGATGCCTTGCTGGTCACTAACAGAGATATAAAAAATAGAAAATCTAACCCTGCAGAGAAAGCCAAAGGCATCAGTGTCTGCATACACATTGATGAGTGTGGATCAGATGACCTCCTGGTTTTAAGGTTCCGTGACTCTAAAGTTTACAGTAATATTGAAGTTGCTCGGCACATGAGCCACCCAAGACCCTTTGCGCAGTGGAAAACGGGTGCTGGCCGCGTGGTACACATCTGCAATCTGCCGGAGGGAAGCTGCACCGAGAATGACGTCATTAACCTGGGGCTGCCCTTTGGAAAGGTCACTAATTACATCCTCATGAAGTCTACTAATCAGAAACCTGGGAAAACCGTGGCTGCCATCATCCAGGACATCCATTCCCAGAGGGAGAGGGACATGTTCCGGGAAGCAGACAGATACGGCCCAGAAAGGCCGAGATCTCGAAGTCCGGTGAGCCGGTCATTGTCCCCGAGGTCCCACACTCCGAGCTTCACCTCCTGCAGCTCTTCTCACAGCCCCCTGGGCCCCTCTCGGGCCGACTGGGGCAACGGCCGGGACTCGTGGGAGCACTCTCCCTACTCCAGGAGGGAGGAAGAGCGAGGCCCGGTCCCCTGGAGGGAGAACGGAGAGGACAAGAGGGAGAGGACGGACACGTGGGCGCATGACCGCAAACAGTACCCCCGGCAGCTGGACAAGGCCGAGTTAGATGAGCGACTGGAAGGAGGGAGGGGCTACCGAGAAAGGCACCCGAGGTCTGGGTCCCCCAACCCGCTCCACTCCGCGTCGGGATACAAAAGCCGAGAAGACGGCTACTACCGCAAAGAGTCCAAGGGCAAATCGGACAGGTATCTGAAGCAGCAGCAGGATGTCCCTGGGAGGTCCAGGAGGAAAAATGAGGCCAGGCTGCGGGAAGGCAGACACCCCCCCGCTGACGACTCGGGCAGGGAAGACGGGCTGGAACCGAAGGGCACCAAGTCGAAGCAGAGTGAGAAAACCAGAACCAAGAGACCTGATAGAGACCAAGAAGGAGCTGATAGGAAAGAAAGCAGAATGGCAGAGAATGAGGCTGAAAAAGAGGAACAGGACAGCATGGAAGAGAGCCCCCTGCATCTGGGCAGGCAGGAGAAAGAAACAGAGTCCTTTGATGCAGAGAACACAAAGGCAAGGAAGGAGCAAGATTCGGAAAGTGGAAGTGAGGCAGAGGGGGAGAGCTGGTACCCCACGAACATGGAGGAGCTGGTTACAGTGGACGAGGTGGGGGAGGAAGAAGATTTTATCATGGAACCGGACATCCCAGAACTGGAGGAAATTGTGCCCATCGAACAGAAGGACAAAATCTGTCCAGAAATATGTCCCTGTGTGACGACCACCTTAGACCTGGACTTAGCCAAAGAGTTCACCAAGGAGGGAGTCAAGACCATAGGTAATGAGGCTGCGGAAATCAGCCTCAAGTTGCCCAAAGAACTGCCTTCTGCTTCCATGAGCTGTCCCAGTGACATGGACGTGGAAATGCCTGGCCTAAATCTGGATGTTGAGCGGAAGCCAGCTGAATGCGAGACGGGCCTCTCACTGGAGGGCTCAGATTGCTGCGAGAAGCAGGCAAAGGGAGCAGAGAGCTCAGATGTTCGTCTGGCCCCTACACTCCAGCAAATGTCTTCCCCCAAGCCAGCAGAGGAGAGGGCCTGGCAGCCTGGCCCCTTTCTTGATGACTGTAAGGCCAGGGGGACCCTGGAAGATGGGGCTGGTGAAGGCAGCCCCTTGGAGGAGAAAGCCAGCCCCCTCACCGAAACAGACCTCCAAAGCCAGGCTTGCCAAGGAGTGTCGACCCAGGATAACTCCAGGTACATGGAAATGAAATCTCTGGACGTGAGGTCACTGGAATATGCTGAAGTGGAGCTGAAACAGCCCCTTTCTTTGCCTTCCTGGGAACCTGAGGATGTGTTCAGAGAACTTAGCATTCCTCTAGGTGGTCACTGCAAGTCCTTTATTAACAAGTCAATTAGCCCCAGAGGGGCTAGTCAACATGGAGGCTCACCCTTTCCATCAAGTTTCCTTTTTTCCTTTTCATCTGCTTTTAAAAATTTCATACTTGTGCCATTTAGTCAGATTCGAAGAGCAAACTTTCTTTTTTTTAAAAGGATGAGTTTGCTGCATAGCGTCCAGTATGCTCTAGGACAAAAACTAAAAAAAGCAAATACACACTGA

Related Sequences

bmy_02808T0 Protein

Length: 798 aa      View alignments
>bmy_02808T0
MRTSQALASSSRGAKGEKAIRPSGRILLYRDSVSQDEPDIWRHCCTPIGGEEVSSDWFYHYKLCDALLVTNRDIKNRKSNPAEKAKGISVCIHIDECGSDDLLVLRFRDSKVYSNIEVARHMSHPRPFAQWKTGAGRVVHICNLPEGSCTENDVINLGLPFGKVTNYILMKSTNQKPGKTVAAIIQDIHSQRERDMFREADRYGPERPRSRSPVSRSLSPRSHTPSFTSCSSSHSPLGPSRADWGNGRDSWEHSPYSRREEERGPVPWRENGEDKRERTDTWAHDRKQYPRQLDKAELDERLEGGRGYRERHPRSGSPNPLHSASGYKSREDGYYRKESKGKSDRYLKQQQDVPGRSRRKNEARLREGRHPPADDSGREDGLEPKGTKSKQSEKTRTKRPDRDQEGADRKESRMAENEAEKEEQDSMEESPLHLGRQEKETESFDAENTKARKEQDSESGSEAEGESWYPTNMEELVTVDEVGEEEDFIMEPDIPELEEIVPIEQKDKICPEICPCVTTTLDLDLAKEFTKEGVKTIGNEAAEISLKLPKELPSASMSCPSDMDVEMPGLNLDVERKPAECETGLSLEGSDCCEKQAKGAESSDVRLAPTLQQMSSPKPAEERAWQPGPFLDDCKARGTLEDGAGEGSPLEEKASPLTETDLQSQACQGVSTQDNSRYMEMKSLDVRSLEYAEVELKQPLSLPSWEPEDVFRELSIPLGGHCKSFINKSISPRGASQHGGSPFPSSFLFSFSSAFKNFILVPFSQIRRANFLFFKRMSLLHSVQYALGQKLKKANTH*