Sequence detailsbmy_02822 (Coding sequence)

Part of scaffold_81 (SequenceType object (1))

For more information consult the page for scaffold_81 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

ABATENSTTRG00000014824 (Bottlenosed dolphin)

Gene Details

4-aminobutyrate aminotransferase

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000014053, Bottlenosed dolphin)

Protein Percentage 90.93%
cDNA percentage 92.06%
Ka/Ks Ratio 0.23187 (Ka = 0.0552, Ks = 0.2379)

BT.93332ENSBTAG00000004038 (Cow)

Gene Details

4-aminobutyrate aminotransferase, mitochondrial precursor

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000005280, Cow)

Protein Percentage 91.94%
cDNA percentage 90.85%
Ka/Ks Ratio 0.11468 (Ka = 0.0457, Ks = 0.3988)

ABAT (Minke Whale)

Gene Details

4-aminobutyrate aminotransferase

External Links

Gene match (Identifier: BACU012977, Minke Whale)

Protein Percentage 94.21%
cDNA percentage 95.13%
Ka/Ks Ratio 0.27688 (Ka = 0.0359, Ks = 0.1297)

Additional orthologs identified in other species via the OPTIC pipeline.

ABAT (Human)   Abat (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 1308 bp    Location:1254762..1211859   Strand:-
Raw sequence 
>bmy_02822
ATGGCCTCCATGTTGCTCACCCGGCGGCTGGCCTGCAGCTTCCAGCACAACTACCGCCTGCTGGTGCCCGAAGCTGTGCACTTTTTCTGCAATTACGAAGAGAGCCGAGGCAATTACCTGGTGGACGTGGATGGCAACCGGATGTTGGATCTTTATTCCCAGATCTCCTCTGTCCCCATAGGATCCAGACACATCAGTCAGGCCGCAGCCAAAGTCGACATTGAATTTGATTATGATGGGCCTTTGATGAAGACGGAAGTCCCAGGGCCTAGATCTCTGCATCGCTGGTGGGCGGGAGCTGGGTCAGGTGGAGAAGTCACTGCTGGTCTCCTGGCTTTTTTGCAGAGCACATTCATCAACAGACCTGCCCTCGGAATCCTTCCTCCTGAGAACTTTGTGGAGAAGCTCCGGGAGTCCCTGCTCTCAGTGGCTCCTAAAGGGATGTCCCAGCTCATCACGATGGCCTGCGGCTCCTGCTCCAACGAAAACGCCTTCAAGACCATCTTCATGTGGTACCGGAGCAAGGAAAGGGGCCAATCGGGTTTCTCCAAAGAGGAGCTGGAGACGTGCATGATCAACCAGCCTCCACGAGCCCTTGTCATGTCCCCCTTTGGAATCCAGGTGGAGGACCTGATCGTGAAATACCGGAAGAAGAAGAAGACGGTGGCCGGGATCATAGTGGAGCCCATCCAGTCTGAGGGTGGAGACAACCACGCGTCGGACGACTTCTTCCGGAAGCTGAGGGACATCTCCAGGAAGCACGGCTGTGCCTTCTTGGTGGATGAGGTCCAGACTGGAGGAGGCTGCACCGGCAAGTTCTGGGCCCACGAGCACTGGGGCTTGGATGACCCAGCGGACGTGATGACCTTCAGCAAGAAGATGATGACCGGGGGCTTCTTCCACAAGGAGGAGTTGAGGCCCAACGCTCCTTACCGGATCTTCAACACGTGGCTGGGGGACCCGTCCAAGAACCTGCTGCTGGCCGAGGTGATCAATATCATCAAGCGGGAGGACCTGCTGAATAACGCGGCCCATGCTGGGAAGGTCCTGCTCACGGGACTGCTGGGCCTCCAGGCCCGGTACCCCCAGCTCATCAGCAGAGTGAGAGGACGAGGCACCTTCTGCTCCTTCGACACACCAGATGAATCCATACGGAATAAACTCATTTCCATAGCCAGAAACAAAGGCCTGATGCTGGGGGGCTGCGGCGACAAATCCATCCGCTTCCGTCCCACTCTGGTCTTCAGGGACCACCACGCACACCTGTTCCTCAATATTTTCAGCGACATCTTAGCCGACTTCAAGTAA

Related Sequences

bmy_02822T0 SequenceType object (3)

Length: 436 aa      View alignments
>bmy_02822T0
MASMLLTRRLACSFQHNYRLLVPEAVHFFCNYEESRGNYLVDVDGNRMLDLYSQISSVPIGSRHISQAAAKVDIEFDYDGPLMKTEVPGPRSLHRWWAGAGSGGEVTAGLLAFLQSTFINRPALGILPPENFVEKLRESLLSVAPKGMSQLITMACGSCSNENAFKTIFMWYRSKERGQSGFSKEELETCMINQPPRALVMSPFGIQVEDLIVKYRKKKKTVAGIIVEPIQSEGGDNHASDDFFRKLRDISRKHGCAFLVDEVQTGGGCTGKFWAHEHWGLDDPADVMTFSKKMMTGGFFHKEELRPNAPYRIFNTWLGDPSKNLLLAEVINIIKREDLLNNAAHAGKVLLTGLLGLQARYPQLISRVRGRGTFCSFDTPDESIRNKLISIARNKGLMLGGCGDKSIRFRPTLVFRDHHAHLFLNIFSDILADFK*