Sequence detailsbmy_02825 (Coding sequence)

Part of scaffold_81 (SequenceType object (1))

For more information consult the page for scaffold_81 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SEC23IPENSTTRG00000009476 (Bottlenosed dolphin)

Gene Details

SEC23 interacting protein

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000008983, Bottlenosed dolphin)

Protein Percentage 73.15%
cDNA percentage 74.3%
Ka/Ks Ratio 0.46943 (Ka = 0.0226, Ks = 0.0482)

SEC23IPENSBTAG00000007441 (Cow)

Gene Details

SEC23-interacting protein

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000009785, Cow)

Protein Percentage 92.39%
cDNA percentage 92.73%
Ka/Ks Ratio 0.20095 (Ka = 0.0386, Ks = 0.1919)

SEC23IP (Minke Whale)

Gene Details

SEC23 interacting protein

External Links

Gene match (Identifier: BACU004709, Minke Whale)

Protein Percentage 97.37%
cDNA percentage 97.94%
Ka/Ks Ratio 0.40284 (Ka = 0.0149, Ks = 0.0371)

Additional orthologs identified in other species via the OPTIC pipeline.

SEC23IP (Human)   Sec23ip (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 3141 bp    Location:1792671..1749438   Strand:-
Raw sequence 
>bmy_02825
ATGGCTGAGAGGAAACCTAACGGTGGCGGAGGCGCCGCTTCCACCTCCTCGTCGGGCACTAACTTACTTTTCTCCTCCTCGGCCACGGAGTTCAGCTTCAACGTGCCCTTTATCCCAGTCACCCAGGCTGCCGCTGCCTCGGCCTCCCTGCTCTTGCCCGGAGGTAGTAAGGAGATGAGGATCCGGTGGGGCAAGTGTGTGCGGGGAGAGGATTCCACAGATGTGGGTGAGGAGGACAGCTTCCTTGGTCAGACTTCTGCTCACACGTCTACCCCACAGACATTTAATTACTTCTCTCAGGTATCAAGCAGTAGTGATCCTTTTGGGAATATTGGACAGTCACCGTTAACAACTGCAGCAACATCCGCTGGACAATCAGCATTCTCCAAGCCCCCAGCTGCTCTTCCTTTTACAACCGGATCCCAAGATATGTCGAATGCGTTTTCACCATCCATTTCGAAGGCTCAATATGGTGCTCCAGCTGCTTCACAAATGGGAATAAATACTTATCTGCCTTCTCAGCCTAGTAGCCTCCCTCCTTCAAATTTTGGGAGCCCACCCCAAGGAACGCCCCAACAGGGATACAATCCATATCGCCACACAGCTGTAAGCAGCAGGGCTAATCCTTATATTGCACCACCACAGCTGCAGCAGTGCCAAACACCGGCCCATCCTACCCATCCCCCGCCCTCTGGACCCCCTGTTCAGATGTACCAGATGCCTCCAGGATCTTTGCCATCGATTCCTCCTTCAGTGCAGCCAGGGTTGTCCCCTCCAACCCAGCAGCAGGCACCTGCTAGACCTGCGGGTCCCTCTGTGCAAGCGTCATCTCCTTTTCTACTTCAAAACCAATATGAACCTGTCCAACCCCACTGGTTTTACTGCAAGGAGRTAGAATACAGACAACTATGGATGCCTTTCAGTGTGTTTGACTCTTTGAATCTTGAAGAAATCTATAACTCAGTCCAGCCAGACCCTGAGAGTGTGGTTCTAGGCACTGATGGAGGGCGCTACGACGTTTACCTCTATGACCGGATGAGGAAAGCCGTGTACTGGGAAGAGGAGCCAGCTGAAGTGAGACGCTGTGCTTGGTTTTACAAAGGGGACACAGACAGTAGATTTATTCCCTATACAGAGGAGTTCAGTGAAAAACTGGAGGCTGAATATAAAAAAGCTGTAACCACGAATCAGTGGCACCGCAGATTAGAGTTTCCGAGTGGGGAGACAATTGTTATGCACAATCCAAAGGTTATTGTTCAGTTCCAGCCCTCATCAGTGCCAGATGAATGGGGGACCACACAAGATGGACAGACAAGGCCCAGGGTTGTAAAGCGTGGAGTTGATGATAACCTTGATGAAATTCCTGATGGGGAAATGCCTCAGGTTGACCATTTGGTGTTCATAGTGCATGGCATTGGACCTGTGTGTGACTTGCGCTTTAGAAGCATTATTGAATGTGTGGATGATTTTAGGGTGGTTTCTCTCAAATTGCTGCAGACACATTTCAAGAAATCTTTAGATGATCGGAAAGTAAGCAGAGTGGAATTCCTTCCGGTTCATTGGCATAGTTCCTTGGGTGGGGATGCCACAGGTGTTGACAGGAATATTAAGAAAATCACTTTACCAAGTATTGGTCGGTTTCGTCACTTTACTAATGAAACCTTGCTAGACATTTTATTTTACAATAGCCCCATCTACTGTCAGAGGATTGTGGAGAAAGTGGGATTGGAGATGAACCGTCTGTATGCACTCTTCATGAGTTCTTTAATATTGTTTGACATCCTGTCTAATCAAAAAGATTTGAATTTATCAAAGTCTCCTGGGCCTTTAGCTGTTGCTAATGGAGTTGTGAAGCAGCCACATTTTCAGGAAAAGCAGATACCTGAAGAGCCAAAGCTGACGTTGGATGAGTCTTGTGACCTTGATGTTGAAAGTGAAGAAGTCCTGACTTTGCAAGAAACTCTGGAAGCACTTAGCCTCTCTGAATACGTTAGCACTTTTGAAAAGGAAAAGATTGATATGGAATCTCTGCTTATGTGTACAGTGGATGACCTGAAGGAAATGGGGATACCCCTTGGACCCAGGAAGAAGATAGCTAACTTCGTAAAACATAAAGCAGTCAAACTGGAACAGAAAAAAGCATCAGAAAAGAAGGCAGTGAYGGCTGCTTCGACAAAAGGACAAGAGGAAAGTGCTCAGAAAGCTAAAGAAATGGCTTCTTCTCCCTCAGAATCTGAGTCCAAGAGGAAACTCCCACTCGGAGTTTATGTTTCTTCTGTGCACGTTGATTATGAGTCTTTTGAAGTTGGCACTGGACAGGTTTCTGTTGTTTACAACTCCTTAGACTTTGAACCAGAGATTTTCTTTGCCTTGGGATCTCCAATTGGTATGTTTCTCACTATTCGAGGAGTGGATAGGATAGATGAGAACTACAGGCTTCCTACCTGCAAAGGGTTCTTCAATATTTATCATCCACTTGATCCAGTGGCATATAGATTAGAACCTATGATTGTACCAGATTTGGACCTAAAAGCAGTTCTCATTCCACATCACAAAGGCAGAAAAAGACTTCATTTAGAGTTGAAAGAAAGTCTCTCTCGTATGGGATCTGATTTGAAGCAGGGTTTCATTAGCTCTCTGAAAAGTGCTTGGCAGACATTAAATGAGTTTGCCCGTGCTCATACCTCTTCAACTCAGCTGCAAGAAGAATTGGAGAAGGTAGCCAATCAAATCAAAGAAGAAGAAGAAAAGCAAGTAGTTGAAGCAGAAAAGACTGTTGAAAGTCCAGATTTTTCCAAGGATGAGGACTACTTAGGAAAGGTTGGAATGTTAAACGGAGGCCGCCGAATTGACTATGTTCTTCAAGAAAAGCCAATAGAGAGTTTTAATGAATATCTTTTCGCTCTTCAGAGTCACTTATGCTATTGGAACGACAGTGCGTTATTGTGTTATTACTATAAGTTTGTAAAGCTGACCGAGGATTCTTTTTCTTCTTTTAAAGACATTCTTGTCTTTACAGAAAGTTGCAGTATAAATTACATTGCTGAGAAAATCCTCAGAGGACATCCCCAGTCTGCTCCTGTGATGGATGACAGAAATGTGATTCACCGACAGTTACTCTGCTGTAATTCTGAGATGTAG

Related Sequences

bmy_02825T0 SequenceType object (3)

Length: 1047 aa      View alignments
>bmy_02825T0
MAERKPNGGGGAASTSSSGTNLLFSSSATEFSFNVPFIPVTQAAAASASLLLPGGSKEMRIRWGKCVRGEDSTDVGEEDSFLGQTSAHTSTPQTFNYFSQVSSSSDPFGNIGQSPLTTAATSAGQSAFSKPPAALPFTTGSQDMSNAFSPSISKAQYGAPAASQMGINTYLPSQPSSLPPSNFGSPPQGTPQQGYNPYRHTAVSSRANPYIAPPQLQQCQTPAHPTHPPPSGPPVQMYQMPPGSLPSIPPSVQPGLSPPTQQQAPARPAGPSVQASSPFLLQNQYEPVQPHWFYCKEXEYRQLWMPFSVFDSLNLEEIYNSVQPDPESVVLGTDGGRYDVYLYDRMRKAVYWEEEPAEVRRCAWFYKGDTDSRFIPYTEEFSEKLEAEYKKAVTTNQWHRRLEFPSGETIVMHNPKVIVQFQPSSVPDEWGTTQDGQTRPRVVKRGVDDNLDEIPDGEMPQVDHLVFIVHGIGPVCDLRFRSIIECVDDFRVVSLKLLQTHFKKSLDDRKVSRVEFLPVHWHSSLGGDATGVDRNIKKITLPSIGRFRHFTNETLLDILFYNSPIYCQRIVEKVGLEMNRLYALFMSSLILFDILSNQKDLNLSKSPGPLAVANGVVKQPHFQEKQIPEEPKLTLDESCDLDVESEEVLTLQETLEALSLSEYVSTFEKEKIDMESLLMCTVDDLKEMGIPLGPRKKIANFVKHKAVKLEQKKASEKKAVXAASTKGQEESAQKAKEMASSPSESESKRKLPLGVYVSSVHVDYESFEVGTGQVSVVYNSLDFEPEIFFALGSPIGMFLTIRGVDRIDENYRLPTCKGFFNIYHPLDPVAYRLEPMIVPDLDLKAVLIPHHKGRKRLHLELKESLSRMGSDLKQGFISSLKSAWQTLNEFARAHTSSTQLQEELEKVANQIKEEEEKQVVEAEKTVESPDFSKDEDYLGKVGMLNGGRRIDYVLQEKPIESFNEYLFALQSHLCYWNDSALLCYYYKFVKLTEDSFSSFKDILVFTESCSINYIAEKILRGHPQSAPVMDDRNVIHRQLLCCNSEM*