Part of scaffold_79 (Scaffold)

For more information consult the page for scaffold_79 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

FRMPD1 ENSTTRG00000011773 (Bottlenosed dolphin)

Gene Details

FERM and PDZ domain containing 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000011168, Bottlenosed dolphin)

Protein Percentage 71.55%
cDNA percentage 72.83%
Ka/Ks Ratio 0.55421 (Ka = 0.027, Ks = 0.0488)

FRMPD1 ENSBTAG00000046574 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000055152, Cow)

Protein Percentage 86.57%
cDNA percentage 90.12%
Ka/Ks Ratio 0.37193 (Ka = 0.0756, Ks = 0.2032)

FRMPD1  (Minke Whale)

Gene Details

FERM and PDZ domain containing 1

External Links

Gene match (Identifier: BACU017548, Minke Whale)

Protein Percentage 96.89%
cDNA percentage 98.1%
Ka/Ks Ratio 0.64879 (Ka = 0.0169, Ks = 0.026)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 4890 bp    Location:799426..714848   Strand:-
>bmy_02844
ATGGCAGAGTTGTGGCACGTAAATGGAAGTGCTGGAGACCAGTTTATTCCAGACACGGAAAGCACACAGAATAGAACAAATGGTGGCAAGATGGCTCCGGCGCTCCCGGGACAGCTCGGCCCGACTCCCCTCTCTGTCTTTTTTACACACTCCTTCTCTTCCAGGGCTAAAGATGCTGCAGCTGATGGACCCCCTGGGATCCCAACCCAGACCATCATCCCTGTGAAACACACAGTAAAAATAGACAAAGACAATCTCCTCCAGGACTATGGATTTCACATTTCTGAGACCCTTCCCCTCACAGTGGTGGCCGTCACAGCAGAAGGCTCCGCTCATGGCAAGCTTTTCCCTGGTGATCAGATCCTCCAGATGAACAACGAGCCTGCTGAAGACCTTTCCTGTGAACGAGCGGTCGATATTCTGAGGGAAGCTGAAGATTCTCTTTCAATCACAGTTGTTCGCTGCACATCGGGAGTCCCCAAGTCCTCCTTCCTAACGGAGGAGAAGCGAGCCAGGCTGAAGACYAACCCCGTGAAGGTGCACTTTGCAGAGGAAGTGCTCGTCAGCGGACACAGCCAGGGTAATTCTCTGCTGTGTATGCCCAACGTGCTCAAGGTGTACTTGGAGAATGGACAGACCAAAGCTTTCAAGTTTGAGGCACACACGACTGTGAAGGACATCATCCTCACGGTGAAGGAGAAGCTGTCGATCCGAAGTATGGAGTACTTTGCGCTGGCCCTGGAGGAGCAGTACAACATCTCACGGCTGCACCTGCTGCACGAGGAGGAGCTCATCCAGCAGGTGGTACAAAGGGAAGAGTCACATGACTACCGCTGCCTCTTCAGGGTGTGTTTTGTTCCCAAGGACCCCCTGGACCTCCTGAAAGAAGACCCCGTAGCCTTTGAATACCTCTATCTGCAGAGCTGCAGCGATGTGCTCCAGGAGCGCTTTGCCGTGGAAATGAAATGCAGCTCTGCGCTCCGGCTCGCGGCCCTGCACATCCAGGAGCGGATCTACGCATGTGCCCAGCCACAGAAGATCTCTTTGAAATACATAGAGAAGGATTGGGGAATAGAGAACTTTATATCTCCAACTTTGCTACGAAACATGAAAGGAAAAGACATCAAGAAAGCCATTAGCTTCCACATGAAGAGGAACCAGAATTTGCTGGAACCCAGACAGAAGCAACTTATTTCTGCTGCCCAGCTACGTTTAAATTACCTACAGATCCTTGGGGAACTCAAGACATACGGTGGGAAAATCTTTAATGCTACTTTAATGTTACAGGATAGAGAATCCTACATTGCCCTTCTAGTTGGAGCCAAGTATGGCATTAGCCACATTATCAACAGCAAACTCAACATCATGTCCATGTTGGCAGAGTTTGCAAACATCAGTCGTGTAGAGCTGACAGAAGAGTCTGAGAAAGTGAGCATGGTCAAAGTGCATCTTCAGGACATCAAGGTTCTGACTTTGCTGCTGGAATCCAACAGTGCAAAAGACCTAGCCTGCCTGATTGCTGGGTACTACAGGCTATATGTCGACCCAGTTACCTCCGTTTTCCTCTGGCCGGGAAACAAACAACAGGTGCACCGGGTATCCGCTGAAGAAGGCTACGAATCCAGGGCATGCAGTGACTCCGAGGAGTCCTCTGAAGTGGACTGCGTGTTGGAGCCCCTCTCTGACAGACACCTGCTGAAGCTGGGCCCCTGCAGACCACTTGTAGAAGAGGAGCAGCCTCCTGGGGACAGCTCCACGCCTGAGGTGGCCGGGAAAGGCCCAAGCGCCTGCGGGGCCAGCAGCAAAACAGACAGTGCTGAGTCGGAGGCATCGGACTCGGCCAACACTGAGAGCCGAGGCTGCAGAACCAGTGGCTCGAGCGAGTCCATGGATGCCCTGGAAGAGGATGACCTGGACGCCTGCTCCTCCAGCAGGTCCGGCTTCTTCCACCTGGGCTCAGTAGGCTTCCCAGAGAATCTTGATTCTGACAGCCAAGAGGAGAGAAGCAGGATCGAAACCAGTGGCTTTCTCTGTCTCCTGGACCTGGCTCAGAGAGCCAACCCTGAGTGCCAGAAGACAGAGTTTTCTGAGAGTCCCGCTCCTGAGACCTTCAGCTGGGGACCGGAACTGAGCGCGGTCAGGCTGGACCCCAGGATGTACGAGGGCAGCCAGATTGACTACTACAACCTGTGCACCAATGTCTCCCCCGCCAGCCACCGGAGCGACAGCTCGGACAGCACAGCTTCCCGGCAGGGTCGGGGCCTGGCAGCCTGGGCCCAGCAGGGCGGGCCTGAGGCCCAGCCCAGCTCCATGCTGCAAGCACTGGCCCCGTGCCTGCCGCTGGCCTTGGAGGATGGCAGTTCAGATGAGGAATACTATGATGCAGCTGACAAGCTCACACCCCCAGATGCCTTCTCAGGTGAGCCCTCCCTCGTAGATCTGCAGATTGTGCAGGCAGCTCCTCAGTACCCACTGGGGGCAGGGGCCAAGCTTGATGGGAAAACAGGGCTCAGAGCTGCTTCTGCTGCAGACACCAGTGCCACAAGCTCACAGAATAAGGCCAGCACTTGCAGCCCTGAGGACAGCCTGAATCCTGGGCCAGGTGGAAGAGAGCCAAGCAGAAGGGGAGGGGTGAAGAAGTATGCCAAGACCCTGAGGAAAAGAAGGTCTTTCCTACAGACCGACTACACCTGTCAGGTCTCATTTCCCCTGATGCCATCAGCCTCCCTGGAGAGCGTGGACGACGTGTGCTACTATGACCGGGAGCCCTACCTGGCCCTCAGTGCACCCTCCCCAACTGTGTCCTGTCTGCAAGATGTGCAGGGTGAGCCTGGCCTCCTGGAGACCAAGGCCCTGGGGCTGCTGGCTCCCCTGAGGGAGACCAAGAGCAAAAACCCAGCCTCCCGGGCCATGGAGATGGAGCCTGAGACCATGGAAACCAAGTCGGTCATCGACTCTCGAGTGTTTTCTATTTCTGCCATTCGCCTCCGGATTGACCCCAGCCATAAAGAGAATTCTGGGATTGCCCCTCTGACCGCCCGTGTTGCCAGTTCCCCAGCAAACACTCCTCACAGTCCCAACCCAGGCTCATCTGGCCCAGATACGGCTCAGCTAGGGCTTCCCCAGACCTCATCTCCATTTCAGGACTCGGATGGCAGTGCCCCCCGAGAACTTGCCATGGAGCTTGGGGACAGCACCTCCTCCCTCTCCAGTGCTGACTTGAACCCAGACAGAATCTGCCTGACCATCAGCCCAGGGCCACATAATATCTCTCAAGGAGACACACTAGAGCTGGGAGGAGTCCAGATAGAAAGAGGACTGGGATCTCTGTTTACAAATCATATGCAAGAAACTGTCCCCCAGGACACAGGGTCTCTGTTGTCTCCTCGAGACAGGCCTAGAAGTGGTGAATGTGGAATAAATTCAGAAGAGAAGATGGCTTCTTTCCCTACGAAGGAGGAGCAGCAAGGACAACTATCTTTGGAACATGATAGAGAAGTTACAAACAAAAATGGCACCAACGTATTTCGTGATGAATCTGAGAAGGATCCAGGTGACCCCAAGGGTGACGTGTTGAATGCTGTTCCACAGACTATTGGTGTCAGTGCTCCAGCTGGTGGCATGGTAGCCTCCCTCTCCTTGGAGACTCCTGTAACAAGGACTGAACAGACCCCACCACATTCCCCCAGAGACCCCCAAGGACAAAGCAGAGAAACCCCAGGCCAAGCCTGCCAGGCCCAAGAACAAAAACTATTGGCAGAGCTGGATTTAGACCCGGGTTTCTTGCTTAGGGACCAGACCATTTCATCAGCTTTCCCTCTGGAGGAGGTCAAGGCAGAGCCACCTAACCATGTGATAGGGGAAGATACCACCCCTAGGGACACTCCTCAGCAGGTCTGTTTGAATCCAGGGCCTTCTCTGCCAGAGCCACTACCGTGTTCCCAAGAGGAGCCCCACTTAGAAGGTTCAAATCATTGTTCACTGCCAGAAAGCAAAGACAAAAGCCCTAGCATGTGCCTTCCTAATGAGAAGTCTTTCCTGTGCTTTGCCCCAGAAAGCTATCCTAAAGTTTCTGCCAGTCTCAGGACGGCCACATCTTCGGGGTTTGCAGGCGTGAATGAGACTGTGGCCCCTAGGACTGGGATGGAGCAGTGCAGCTGCCAGTTCTCCTATGCCACGTGCTTCCGTGGCCTGCAGCCAGAGACGGAGGAGGAAGACAGGGGCCTGGAAGCACACCCCACAGCCCCCCTCACCTCGCCACCCTCTGCAGGAGGCCAGCTGGCCCTGCCCTGGAGGCCTGCCCGGGCCCACAGCTGCAGCACTGAGCCCCTGTCGAGGAACAGCCACATCTGGCCAGAGTACTGCGCCAGGGCTCTGAGACAGCTGAAAGCTGCCCCTGCCAGCACCCCCGAGGGCTTCGTCCAACTCACGGAGAGCTTGCTGGAATTACAGGACATTTTAGAAGCTTCCTGGGGAAATGGGAACACGCACCCTTCCGAGAAGTGCACCTGGCACTTTTCTGAAAGCCGGAGCCGCCTCTGCATGGGCTCCCAAAAGCTCCTGTTGAGCTGTCAGCACGTGATCAGAATGGACCAGTCCCCCGAGGAGATGCAGGGTGCTGTGCGCGACACCTTCCAGCACCTGGTCCAGCTGGCCGGCCTGTGCTTCCAGTTCACAGCCTGCAGCCGCTGCTCCGCCCGACACAGAGAGGCAGCGGGGAACCTGAGGGATGTGGTGTACACCTACCACCAGTTTGTGGAGGCCGCTAAGCTGACCTGCGAGAGAGGCTACCATGACCTGAGTGTGAAACTCTTGGCCCGTCAGTGTACGGCCCTCACAGCCGCTGTATTCTGTTTAACCCAGAAGTTCTGGGTCTCCACTGCCCTGTGA

Related Sequences

bmy_02844T0 Protein

Length: 1630 aa      View alignments
>bmy_02844T0
MAELWHVNGSAGDQFIPDTESTQNRTNGGKMAPALPGQLGPTPLSVFFTHSFSSRAKDAAADGPPGIPTQTIIPVKHTVKIDKDNLLQDYGFHISETLPLTVVAVTAEGSAHGKLFPGDQILQMNNEPAEDLSCERAVDILREAEDSLSITVVRCTSGVPKSSFLTEEKRARLKTNPVKVHFAEEVLVSGHSQGNSLLCMPNVLKVYLENGQTKAFKFEAHTTVKDIILTVKEKLSIRSMEYFALALEEQYNISRLHLLHEEELIQQVVQREESHDYRCLFRVCFVPKDPLDLLKEDPVAFEYLYLQSCSDVLQERFAVEMKCSSALRLAALHIQERIYACAQPQKISLKYIEKDWGIENFISPTLLRNMKGKDIKKAISFHMKRNQNLLEPRQKQLISAAQLRLNYLQILGELKTYGGKIFNATLMLQDRESYIALLVGAKYGISHIINSKLNIMSMLAEFANISRVELTEESEKVSMVKVHLQDIKVLTLLLESNSAKDLACLIAGYYRLYVDPVTSVFLWPGNKQQVHRVSAEEGYESRACSDSEESSEVDCVLEPLSDRHLLKLGPCRPLVEEEQPPGDSSTPEVAGKGPSACGASSKTDSAESEASDSANTESRGCRTSGSSESMDALEEDDLDACSSSRSGFFHLGSVGFPENLDSDSQEERSRIETSGFLCLLDLAQRANPECQKTEFSESPAPETFSWGPELSAVRLDPRMYEGSQIDYYNLCTNVSPASHRSDSSDSTASRQGRGLAAWAQQGGPEAQPSSMLQALAPCLPLALEDGSSDEEYYDAADKLTPPDAFSGEPSLVDLQIVQAAPQYPLGAGAKLDGKTGLRAASAADTSATSSQNKASTCSPEDSLNPGPGGREPSRRGGVKKYAKTLRKRRSFLQTDYTCQVSFPLMPSASLESVDDVCYYDREPYLALSAPSPTVSCLQDVQGEPGLLETKALGLLAPLRETKSKNPASRAMEMEPETMETKSVIDSRVFSISAIRLRIDPSHKENSGIAPLTARVASSPANTPHSPNPGSSGPDTAQLGLPQTSSPFQDSDGSAPRELAMELGDSTSSLSSADLNPDRICLTISPGPHNISQGDTLELGGVQIERGLGSLFTNHMQETVPQDTGSLLSPRDRPRSGECGINSEEKMASFPTKEEQQGQLSLEHDREVTNKNGTNVFRDESEKDPGDPKGDVLNAVPQTIGVSAPAGGMVASLSLETPVTRTEQTPPHSPRDPQGQSRETPGQACQAQEQKLLAELDLDPGFLLRDQTISSAFPLEEVKAEPPNHVIGEDTTPRDTPQQVCLNPGPSLPEPLPCSQEEPHLEGSNHCSLPESKDKSPSMCLPNEKSFLCFAPESYPKVSASLRTATSSGFAGVNETVAPRTGMEQCSCQFSYATCFRGLQPETEEEDRGLEAHPTAPLTSPPSAGGQLALPWRPARAHSCSTEPLSRNSHIWPEYCARALRQLKAAPASTPEGFVQLTESLLELQDILEASWGNGNTHPSEKCTWHFSESRSRLCMGSQKLLLSCQHVIRMDQSPEEMQGAVRDTFQHLVQLAGLCFQFTACSRCSARHREAAGNLRDVVYTYHQFVEAAKLTCERGYHDLSVKLLARQCTALTAAVFCLTQKFWVSTAL*