Part of scaffold_79 (Scaffold)

For more information consult the page for scaffold_79 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

RNF38 ENSTTRG00000006033 (Bottlenosed dolphin)

Gene Details

ring finger protein 38

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000005706, Bottlenosed dolphin)

Protein Percentage 95.06%
cDNA percentage 96.19%
Ka/Ks Ratio 0.67007 (Ka = 0.0338, Ks = 0.0505)

RNF38 ENSBTAG00000005519 (Cow)

Gene Details

RING finger protein 38

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000007260, Cow)

Protein Percentage 93.9%
cDNA percentage 93.51%
Ka/Ks Ratio 0.33309 (Ka = 0.0439, Ks = 0.1317)

RNF38  (Minke Whale)

Gene Details

ring finger protein 38

External Links

Gene match (Identifier: BACU019101, Minke Whale)

Protein Percentage 94.67%
cDNA percentage 95.92%
Ka/Ks Ratio 0.59063 (Ka = 0.035, Ks = 0.0592)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1035 bp    Location:1902121..1916648   Strand:+
>bmy_02856
ATGGAGAATGATGTGGGAGAACACGTTATTAATATTGATTTCTTCCAGATAGGTAGGCTCCATCAGGGCACCGTTCCTGTTTCTTACACAGTAACAACAGTGGCACCACATGGGATTCCCCTCTGCACAGGCCAGCACATCCCTGCTTGCAGTACACAGCAGGTCCCAGGATGCTCTGTGGTTTTCAGTGGACAGCACCTCCCTGTCTGTAGTGTGCCTCCTCCAATGCTTCAAGCATGTTCAGTTCAGCACTTACCAGTACCATACGCTGCGTTTCCACCCCTTATTTCTAGCGATCCATTTCTTTTACATCCTCCTCACCTTTCTCCCCATCATCCTCCTCATTTGCCACCTCCAGGCCAGTTTGTCCCTTTTCAAACACAGCAGTCACGATCGCCTCTGCAAAGGATAGAAAACGAAGTGGAACTCTTAGGAGAMCATCTTCCTGTAGGAGGTTTTACTTACCCACCATCAGCCCATCCCCCAACATTGCCTCCATCAGCTCCTTTGCAGTTCTTAACACATGATCCTTTGCATCAGGAGGTTTCCTTTGGAGTATCTTATCCTCCATTTATGCCTCGGAGGCTCACAGGACGTAGTAGATATCGATCCCAGCAGCCAATACCACCTCCCCCTTATCATCCCAGCTTACTGCCATATGTGTTATCAATGCTTCCAGTGCCACCTGCAGTGGGCCCAACTTTCAGTTTTGAATTGGATGTGGAAGATGGAGAAGTAGAAAATTACGAGGCCCTGTTAAACCTAGCAGAGCGACTGGGAGAGGCCAAGCCTCGAGGACTGACTAAAGCAGATATTGAACAACTTCCTTCTTACCGGTTCAATCCTAACAACCACCAGTCAGAACAGACTTTGTGTGTAGTATGCATGTGTGATTTTGAGTCAAGGCAGCTACTTAGAGTTTTACCCTGTAACCACGAGTTCCATGCCAAGTGTGTCGACAAATGGCTTAAGGCAAATCGTACTTGCCCAATCTGCCGAGCTGATGCTTCAGAAGTGCATCGGGATTCAGAATGA

Related Sequences

bmy_02856T0 Protein

Length: 345 aa      View alignments
>bmy_02856T0
MENDVGEHVINIDFFQIGRLHQGTVPVSYTVTTVAPHGIPLCTGQHIPACSTQQVPGCSVVFSGQHLPVCSVPPPMLQACSVQHLPVPYAAFPPLISSDPFLLHPPHLSPHHPPHLPPPGQFVPFQTQQSRSPLQRIENEVELLGXHLPVGGFTYPPSAHPPTLPPSAPLQFLTHDPLHQEVSFGVSYPPFMPRRLTGRSRYRSQQPIPPPPYHPSLLPYVLSMLPVPPAVGPTFSFELDVEDGEVENYEALLNLAERLGEAKPRGLTKADIEQLPSYRFNPNNHQSEQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICRADASEVHRDSE*