Sequence detailsbmy_02871 (Coding sequence)

Part of scaffold_80 (SequenceType object (1))

For more information consult the page for scaffold_80 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

C17orf78ENSTTRG00000008913 (Bottlenosed dolphin)

Gene Details

chromosome 17 open reading frame 78

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000008454, Bottlenosed dolphin)

Protein Percentage 65.29%
cDNA percentage 71.18%
Ka/Ks Ratio 0.52962 (Ka = 0.3138, Ks = 0.5926)

C19H17orf78ENSBTAG00000025242 (Cow)

Gene Details

Uncharacterized protein C17orf78 homolog

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000035278, Cow)

Protein Percentage 64.71%
cDNA percentage 73.33%
Ka/Ks Ratio 0.62439 (Ka = 0.2967, Ks = 0.4752)

Additional orthologs identified in other species via the OPTIC pipeline.

C17orf78 (Human)   Gm11437 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 513 bp    Location:634956..645892   Strand:+
Raw sequence 
>bmy_02871
ATGTCTGATCTCCCCAAGTGCAAGTTTTATGAGAAGGAACTGCATTCTTCTGTATCTCCCTCTCCAGTGCCCAGAATTCTCAAGACTTTTTTACCAGGGATCTCCCAGTGTCTATCCAGTGATGGGGGCTTCATCAGAGACTTTTCCCACCACTACCACCTTCGTAACTCCTGGGAAAAAGGAGAGAAAACTACAAGGATTGATGATTTTTCTAGTCCTCTGAAACAAGACACAGATGAGGACCTAGAGAAGAGGCAGAAATGGAGCATTGTGGTCAAATTTCTGATTGCAGTCACCTTGTTGTTCAGTGGAATTGCCATTACAGTGTTCGTCATTTTTGAAGTCCCATGCCCTAGTCAATGCCTAGGAGCCAGAGAGCTATGCCAATGCCAGAGGTTGTGGAGAAGGCAAAGAAAGGAAGGCCAGCAACCTGGTGTTGGACAAGATGCTCCCAAATCATCAAGCCCCAAGAAAGCTGCAGAGATCACTGTGGTCCAYGAGACATACTTCTGA

Related Sequences

bmy_02871T0 SequenceType object (3)

Length: 171 aa      View alignments
>bmy_02871T0
MSDLPKCKFYEKELHSSVSPSPVPRILKTFLPGISQCLSSDGGFIRDFSHHYHLRNSWEKGEKTTRIDDFSSPLKQDTDEDLEKRQKWSIVVKFLIAVTLLFSGIAITVFVIFEVPCPSQCLGARELCQCQRLWRRQRKEGQQPGVGQDAPKSSSPKKAAEITVVHETYF*