Part of scaffold_80 (Scaffold)

For more information consult the page for scaffold_80 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

DDX52 ENSTTRG00000008917 (Bottlenosed dolphin)

Gene Details

DEAD (Asp-Glu-Ala-Asp) box polypeptide 52

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000008458, Bottlenosed dolphin)

Protein Percentage 96.06%
cDNA percentage 96.72%
Ka/Ks Ratio 0.41398 (Ka = 0.0254, Ks = 0.0613)

DDX52 ENSBTAG00000010313 (Cow)

Gene Details

Probable ATP-dependent RNA helicase DDX52

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000013622, Cow)

Protein Percentage 94.27%
cDNA percentage 94.09%
Ka/Ks Ratio 0.21268 (Ka = 0.0344, Ks = 0.1618)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1947 bp    Location:867004..830765   Strand:-
>bmy_02876
ATGGATGCTCATGACCTGTTTCGCCGGCTCGGCGCGGGGGCCAAATTCGACGTGAGACGCTTCTCGGCGGACGCTGCCCGATTCAAGATAGGAAAAAGGAAATATGACTTTGATTCTTCGGAGGTGCTACAGGGACTGGACTTTTTTGGAAACAAGAAGTCTGTCCCAGAAATTACTTCTCAAGAAGTTTCTACTATACAGTGGATATCATCTGTGGAAGCAAAGATTGAAGATAAAAAAGTTAAAAGAGAAAATAAACTAACTTCAGGAAAGTTGGAGCAGCTCAGAAAAGAAAAGATAAACTTCTTCCGGAATAAACATAAAATTCATGTCCAAGGAACTGATCTTCCTGACCCAATTGCTACATTTCAGCAACTTGACCAGGAATTTAAAATCAGTTCTCGACTGCTTCAGAACATTCTAGATGCAGGCTTCCAGATACCTACGCCAATCCAAATGCAAGCCATTCCAGTTATGCTGCATGGTCGAGAACTTCTGGCTTCTGCTCCTACTGGATCTGGAAAGACTTTGGCTTTTAGCATTCCTATTTTAATGCAGCTGAAACAACCCACAAACAAAGGCTTCAGAGCCCTGATTATATCACCAACACGAGAACTTGCCAGCCAGATTCACCGAGAGTTAATAAAAATATCTGAGGGAACAGGATTCAGGATACACATGATCCACAAAGCAGCAGTTGCAGCCAAGAAATTTGGACCTAAATCATCTAAGAAATTTGATATTCTTGTGACTACTCCAAATCGACTTATCTATTTATTAAAGCAAGATCCTCCAGGAATAGACTTAACAAGTGTTGAATGGCTGGTAGTTGATGAATCAGATAAACTGTTTGAAGATGGCAAAACTGGGTTCAGAGACCAGCTGGCTACCATTTTCTTGGCCTGCACATCCCACAAGGTCAAAAGAGCTATGTTCAGTGCAACTTTTGCCTATGATGTTGAGCAGTGGTGCAGACTCAACTTGGATAATGTCATTACTGTTTCCATTGGAGCAAGAATTAAAGGGGGGAAACAAAAATCGGCTCTTGCAAACTACAAGGGATGTTTTCTTCTTAGGAATTCTGCAGTRGAGACTGTAGAACAAGAGCTTCTCTTCGTTGGGTCTGAGACTGGAAAACTTCTGGCCATGAGAGAACTTGTTAAAAAGGGTTTCAATCCACCTGTTCTTGTTTTTGTTCAGTCCATTGAAAGGGCTAAAGAACTTTTTCATGAGCTCATATATGAAGGTATTAATGTGGATGTTATTCATGCAGACAGAACTCAGCAACAGAGTGGTACTAAAACATTTAATGTGTGTTCTGTTAACCAGAGAGATAACACAGTCCATAGCTTCAGAGCAGGAAAAATCTGGGTTCTTATTTGTACAGCCTTGCTAGCCAGAGGGATCGATTTTAAAGGTGTGAACTTGGTCATCAACTATGACTTTCCAACCAGCTCAGTGGAATATATCCACAGGATAGGTCGAACTGGAAGAGCCGGGCATAAAGGACAAGCTGTTACATTTTTCACTGAAGATGATAAACCATTATTAAGAAGAGGGTTTATGTACATAAACATCAGTTTGACAAGATACAAATTTACGTTTATGGGTACCTTTTTCAGTGTTGCCAATGTTATCCAGCAGGCCGGATGTCCTGTCCCAGAATACATAAAAGGTTTCCAAAAACTACTAAGTAAACAAAAGAAAAAGATGATTAAGAAGCCTTTGGAAAGGGAGAGCATTAGTACAACTCCAAAATATTTCTTAGAAAAAGCTAAGGATAAACGCTTCATGTTTCCAGTTGCAGGTGGAATAAGACCCCCTCAAGGTCTGATGCCGATGCAGCAACAAGGATTTCCTATGGTCTCCGTCATGCAGCCTAATATGCAAGGCATGATAGGAATGAATTACAGCTCTCAGATGTCCCAGGGACCTATTGCTATGCAG

Related Sequences

bmy_02876T0 Protein

Length: 649 aa      View alignments
>bmy_02876T0
MDAHDLFRRLGAGAKFDVRRFSADAARFKIGKRKYDFDSSEVLQGLDFFGNKKSVPEITSQEVSTIQWISSVEAKIEDKKVKRENKLTSGKLEQLRKEKINFFRNKHKIHVQGTDLPDPIATFQQLDQEFKISSRLLQNILDAGFQIPTPIQMQAIPVMLHGRELLASAPTGSGKTLAFSIPILMQLKQPTNKGFRALIISPTRELASQIHRELIKISEGTGFRIHMIHKAAVAAKKFGPKSSKKFDILVTTPNRLIYLLKQDPPGIDLTSVEWLVVDESDKLFEDGKTGFRDQLATIFLACTSHKVKRAMFSATFAYDVEQWCRLNLDNVITVSIGARIKGGKQKSALANYKGCFLLRNSAVETVEQELLFVGSETGKLLAMRELVKKGFNPPVLVFVQSIERAKELFHELIYEGINVDVIHADRTQQQSGTKTFNVCSVNQRDNTVHSFRAGKIWVLICTALLARGIDFKGVNLVINYDFPTSSVEYIHRIGRTGRAGHKGQAVTFFTEDDKPLLRRGFMYINISLTRYKFTFMGTFFSVANVIQQAGCPVPEYIKGFQKLLSKQKKKMIKKPLERESISTTPKYFLEKAKDKRFMFPVAGGIRPPQGLMPMQQQGFPMVSVMQPNMQGMIGMNYSSQMSQGPIAMQ