Sequence detailsbmy_02892 (Coding sequence)

Part of scaffold_80 (SequenceType object (1))

For more information consult the page for scaffold_80 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CCL16ENSTTRG00000005844 (Bottlenosed dolphin)

Gene Details

chemokine (C-C motif) ligand 16

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000005522, Bottlenosed dolphin)

Protein Percentage 88.89%
cDNA percentage 94.61%
Ka/Ks Ratio 1.35807 (Ka = 0.0618, Ks = 0.0455)

CCL16ENSBTAG00000007193 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000009464, Cow)

Protein Percentage 79.0%
cDNA percentage 87.0%
Ka/Ks Ratio 0.43179 (Ka = 0.1123, Ks = 0.2602)

Additional orthologs identified in other species via the OPTIC pipeline.

CCL16 (Human)  

Genome Location

Sequence SequenceType object (2)

Length: 369 bp    Location:1264766..1268745   Strand:+
Raw sequence 
>bmy_02892
ATGACCAGAAAGGAGACTGTCTCCGTTCAGCCTCCGAAGCCTAACTGCCCCACTGAGAGGATGAAAATCTCCGTGGCTGCCCTCTCTCTCCTCATCCTCATCCTCACCATTACTTCTGCTGTTCACAGCCAGCCAAAAATTCCTGAGTCGGTGAACCCTCCACCCACCTGCTGCCTCAAGTATCATGAGAAAGTATTGCCAAGAAAAAAGGTGGTGAGATACAGAAAGGCCCTCAACTGTTACCTGCCAGCAATCATCTTCATCACCAGAAGGAAACGAGAGATCTGTACCAACCCCAATGACGAATGGGTCCAAGAATACATCAAGGATCCCAGACTACCTTTGCTTCCTTCCAGGAAGTTGGTCTAG

Related Sequences

bmy_02892T0 SequenceType object (3)

Length: 123 aa      View alignments
>bmy_02892T0
MTRKETVSVQPPKPNCPTERMKISVAALSLLILILTITSAVHSQPKIPESVNPPPTCCLKYHEKVLPRKKVVRYRKALNCYLPAIIFITRRKREICTNPNDEWVQEYIKDPRLPLLPSRKLV*