Sequence detailsbmy_02896 (Coding sequence)

Part of scaffold_80 (SequenceType object (1))

For more information consult the page for scaffold_80 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

MMP23BENSTTRG00000014141 (Bottlenosed dolphin)

Gene Details

matrix metallopeptidase 23B

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000013412, Bottlenosed dolphin)

Protein Percentage 66.07%
cDNA percentage 70.9%
Ka/Ks Ratio 0.45001 (Ka = 0.1916, Ks = 0.4258)

MMP28ENSBTAG00000006086 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000007997, Cow)

Protein Percentage 64.37%
cDNA percentage 70.58%
Ka/Ks Ratio 0.28554 (Ka = 0.2921, Ks = 1.0229)

Additional orthologs identified in other species via the OPTIC pipeline.

MMP28 (Human)   Mmp28 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 1650 bp    Location:1365805..1398554   Strand:+
Raw sequence 
>bmy_02896
ATGCGGGACTTCGACAGCCAATCAGAGGGCAGCGGGCGGTACCACAACGCCACGGCTCGAGGGGCATTCCTGGAAAAGTACGGATATCTCAGTGAACCCGCCCCCAGTAGTCCCGCCTCCACGCGATTCAGCAATGCCATCAGGGAGTTCCAGTGGGTGTCCCAGCTGCCCATGAGCGGGATGCTGGACCCCGCCACGCTGCGCCAGATGATGCAGCCCCGCTGTGGGGTGGCAGATACCGATAGCCAGGTGGCCTGGACCAAGAGAGTCAGTGCCGTATTTACTGGACGTCGGGCCAAAATGAGGCGTAAGAAACGCTTTGCCAGGCAAGGCAACAAATGGTACAAGCGGCATCTCTCCTACCGCCTGGTGAACTGGCCCCAGCACCTGCCTGAACCGGCAGTTCGGGGGGCCGTGCGCGCCGCCTTCCAGCTGTGGAGCAACGTCTCAGCGCTGGAGTTCTGGGAGGCCCCGGCCACAGGCCCCGCTGACATCCGCCTCACCTTCTTCCAAGGGGACCACAACGACGGGCTGAGCAACGCCTTCGATGGCCCAGGCGGCGCCCTGGCGCACGCCTTCCTCCCCCGCCGCGGCGAAGCGCACTTCGACCGCGACGAGCGCTGGTCCCTGAGCCGCCGCCGCGGGCGCAACCTGTTCGTGGTGCTGGCGCATGAGATCGGCCACACGCTCGGCCTGACCCACTCGGCCGCGCCGCGCGCGCTCATGGCGCCCTACTACAAGAGGCTGGGCCGCGACGCGCTGCTCAGCTGGGACGACGTGCTGGCCGTGCAGAGCCTGTATGGTGAGCCCCCGGCGCGCTCGCCACTGCGCTCTCCCCTGTCCCCTGCGCCCCGGGATCCCCAGGGCTCGGACACCGGCTCTTCAAATAGGATTCCCCATCCTAAGCGCAGGAAGCTGGCCTCCCCATCACTGGTCCTTCCCGACGCTGAAGCTTCGGGCTCCCCTCAAATCTTGAGAAACCTCATCTCCTGCTGTGCTCCACCCCCATGCCTGGCCTCTATCATCGCAACCAATTCCTGGGCACAGCCCTCCTCTGCGTTCCAGTTGCTGATTCCTGCCCAACCAGGGCCGCGCAATTCCTCTCGGAAGCCCCAGGGCGGCTCAGTGGCCATCCAGCTCCCGGGAAAGCTGTTCACGGACTTTGAGGCCTGGGACCCCCACAGACTCCAAGGAAGGCGCCCCGAAACCCGAGGTCCTAAATATTGCCACTCCTCCTTCGATGCAATCACTGTAGGGAGTCGGTGCTGGAGGTTCCAGGGCCCCAAGCCAGTGTGGGGCTCCCCACAGCTGTGCCGGGCCGGGGGCCTGCCCCCCCACCCGGATGCTGCCCTCTTCTTCCCTCCTCTGAGACGCCTCATCCTCTTCAAGGGCGCCCGCTACTACGTGCTGGCCCGAGGGGGGCTGCAGGTGGAGCCCTACTACCCCCGAGGCCTGCAGGACTGGGGCGGTGTCCCTGAGGAGGTCAGCGGCGCCCTGCCCAGGCCCGACGGCTCCATCATCTTCTTCAGAGACGACCGCTACTGGCGCCTCGACCAGGCCAAACTTCGAGCAACGGCCTCGGGCCGCTGGGCCACAGAGCTGCCCTGGATGGGCTGCTGGCATGCCAACTCGGGGGGCACCCTGTTCTGA

Related Sequences

bmy_02896T0 SequenceType object (3)

Length: 550 aa      
>bmy_02896T0
MRDFDSQSEGSGRYHNATARGAFLEKYGYLSEPAPSSPASTRFSNAIREFQWVSQLPMSGMLDPATLRQMMQPRCGVADTDSQVAWTKRVSAVFTGRRAKMRRKKRFARQGNKWYKRHLSYRLVNWPQHLPEPAVRGAVRAAFQLWSNVSALEFWEAPATGPADIRLTFFQGDHNDGLSNAFDGPGGALAHAFLPRRGEAHFDRDERWSLSRRRGRNLFVVLAHEIGHTLGLTHSAAPRALMAPYYKRLGRDALLSWDDVLAVQSLYGEPPARSPLRSPLSPAPRDPQGSDTGSSNRIPHPKRRKLASPSLVLPDAEASGSPQILRNLISCCAPPPCLASIIATNSWAQPSSAFQLLIPAQPGPRNSSRKPQGGSVAIQLPGKLFTDFEAWDPHRLQGRRPETRGPKYCHSSFDAITVGSRCWRFQGPKPVWGSPQLCRAGGLPPHPDAALFFPPLRRLILFKGARYYVLARGGLQVEPYYPRGLQDWGGVPEEVSGALPRPDGSIIFFRDDRYWRLDQAKLRATASGRWATELPWMGCWHANSGGTLF*