Part of scaffold_80 (Scaffold)

For more information consult the page for scaffold_80 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

RFFL ENSTTRG00000015494 (Bottlenosed dolphin)

Gene Details

ring finger and FYVE-like domain containing E3 ubiquitin protein ligase

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000014672, Bottlenosed dolphin)

Protein Percentage 74.8%
cDNA percentage 75.07%
Ka/Ks Ratio 0.20481 (Ka = 0.0295, Ks = 0.1441)

RFFL ENSBTAG00000013645 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000018136, Cow)

Protein Percentage 71.6%
cDNA percentage 75.73%
Ka/Ks Ratio 0.23948 (Ka = 0.2108, Ks = 0.8804)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 837 bp    Location:1844329..1860680   Strand:+
>bmy_02912
ATGTGGGCAACCTGCTGCAACTGGTTCTGCCTGGATGGACAGCCTGAGGAGGCCCCACCGCCCCAGGGAGCCAGGACGCAGGCCTATTCCAACCCTGGGTACAGCTCCTTCCCTTCCCCCACGGGCTCGGAACCAAACTGCAAGGCCTGCGGGGCCCACTTCGCAAGCATGGCCAGGAAGATGGGGGAGGTCTCGCCCAGCTCCCATCGCACTGTCTTGTTCTCGCTGTCTGACGTGGTTTCCTCTGCCTCTTGCTCTAAGCAGCAGACCTGCTTGGACTGTAAGAAGAATTTCTGCGTGGCCTGTTCGAGCCAAGTGGGAAGCGGGCCCCGCCTCTGCCTTCTCTGCCAGCGCTTCCGAGCTACAGCCTTTCAGCGGGAGGAGCTCATGAAGATGAAGGTGAAGGACCTGAGGGACTATCTCAGCCTGCATGACATCTCTACCGAAACGTGCCGGGAGAAAGAGGAGCTGGTGTTCTTGGTGCTTGGCCAGCAGCCTGTAATCTCCCAGGAGGGCAGGACTCACGCCCCCAGCCTGTCCCCGGACTCCCCCGAGCAGCAGGCCTTCCTGACCCAGCCTCACACCAGCACAGTACCTCCCACCTCACCCGGCCTCCCTTCCTCAGCCCCAGCCCAGGCTCGGGACCGGCAGCAGGTACGGCCCGTTGGCAGCCACACCGTCTCTGCCAGGTGGAGGGCTCGCTTTCCTCTCCCGCCTGCACCGTGGGAGCGGGGCAAGGTTAAGTGTCTGGATTATGTGACGCCTTTCTGCTTACTGATGAGGGATGATGTTTTCTGGACATCAGACTCACGTGTTGGCTTTTTTCAGGGATATTGA

Related Sequences

bmy_02912T0 Protein

Length: 279 aa      View alignments
>bmy_02912T0
MWATCCNWFCLDGQPEEAPPPQGARTQAYSNPGYSSFPSPTGSEPNCKACGAHFASMARKMGEVSPSSHRTVLFSLSDVVSSASCSKQQTCLDCKKNFCVACSSQVGSGPRLCLLCQRFRATAFQREELMKMKVKDLRDYLSLHDISTETCREKEELVFLVLGQQPVISQEGRTHAPSLSPDSPEQQAFLTQPHTSTVPPTSPGLPSSAPAQARDRQQVRPVGSHTVSARWRARFPLPPAPWERGKVKCLDYVTPFCLLMRDDVFWTSDSRVGFFQGY*