Part of scaffold_82 (Scaffold)

For more information consult the page for scaffold_82 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SNAI1 ENSTTRG00000002029 (Bottlenosed dolphin)

Gene Details

snail family zinc finger 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000001905, Bottlenosed dolphin)

Protein Percentage 89.77%
cDNA percentage 91.04%
Ka/Ks Ratio 0.33102 (Ka = 0.0719, Ks = 0.2173)

BT.61987 ENSBTAG00000014554 (Cow)

Gene Details

zinc finger protein SNAI1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000019345, Cow)

Protein Percentage 90.11%
cDNA percentage 86.95%
Ka/Ks Ratio 0.09632 (Ka = 0.0644, Ks = 0.6682)

SNAI1  (Minke Whale)

Gene Details

snail family zinc finger 1

External Links

Gene match (Identifier: BACU011334, Minke Whale)

Protein Percentage 89.77%
cDNA percentage 91.04%
Ka/Ks Ratio 0.33201 (Ka = 0.0719, Ks = 0.2166)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 855 bp    Location:1186647..1192840   Strand:+
>bmy_02938
CAGCTGTACGGCCTCGCGGGTGGAGGGTCTTGGGATCCCAGCACGACCCGGCTACCCTCGGTGCTTCGGCCACCATGCCGCGCTCTTTCCTCGTCAGGAAGTCCGCCTGTTCCCGCCGGAGACCCAATTACAGCGAGCTCCACGACTCTTCTCCAGCAGCCCTACGACCAGGCCCACCTGCTGGCAGCCATCCCGCCGCCTGAGGTCCTCAATCCCACGGCCTCACTGCCTACGCTCATCTGGGACTCTCTCCTGGCACCCCAAGCCCAGCCGATTGGCTGGGCCTCGCTTCTGCCCCAGGAGATCCCCAAGGCCGTCGAGCTGACCTCCCTGTCTGACGAGGACAGCGGGAAAGGCTCCCAGCCCCCCAGCCCACCCTCACCGGCTCCTTCGTCCTTCTCTTCCACCTCAGCCTCCTCCCTGGAGGCCGAGGGTTATGCTGCCTTCCCAGGCTTGGGCCAGTTGCCCAAGCAGCTGGCTGGGCTCTCCGTGGCCAAGGACCCCCAGTCTCGCAAGGCCTTCAACTGCAAATACTGCAACAAGGAGTACATCAGCCTGGGTGCCCTTAAGATGCACATCAGAAGCCACACGCTGCCTTGCGTCTGTAGCACCTGCGGGAAGGCCTTCTCCAGGCCCTGGCTGCTGCAGGGCCACGTCCGGACCCACACTGGCGAAAAGCCCTTCTCCTGCCCCCACTGCAGCCGCGCCTTCGCTGACCGCTCCAACCTGCGGGCCCATCTCCAGACCCACTCGGATGTCAAAAAGTACCAGTGCAAGACGTGCTCCAGAACCTTCTCCCGAATGTCCCTGCTCCACAAGCACCAAGAGTCAGGCTGCTCAGGGGGGCCCCGCTGA

Related Sequences

bmy_02938T0 Protein

Length: 285 aa      View alignments
>bmy_02938T0
QLYGLAGGGSWDPSTTRLPSVLRPPCRALSSSGSPPVPAGDPITASSTTLLQQPYDQAHLLAAIPPPEVLNPTASLPTLIWDSLLAPQAQPIGWASLLPQEIPKAVELTSLSDEDSGKGSQPPSPPSPAPSSFSSTSASSLEAEGYAAFPGLGQLPKQLAGLSVAKDPQSRKAFNCKYCNKEYISLGALKMHIRSHTLPCVCSTCGKAFSRPWLLQGHVRTHTGEKPFSCPHCSRAFADRSNLRAHLQTHSDVKKYQCKTCSRTFSRMSLLHKHQESGCSGGPR*